Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
  0% [=                                                 ] /                     
  5% [===                                               ] -                     
 10% [======                                            ] \                     
 15% [========                                          ] |                     
 21% [===========                                       ] /                     
 26% [==============                                    ] -                     
 31% [================                                  ] \                     
 36% [===================                               ] |                     
 42% [======================                            ] /                     
 47% [========================                          ] -                     
 52% [===========================                       ] \                     
 57% [=============================                     ] |                     
 63% [================================                  ] /                     
 68% [===================================               ] -                     
 73% [=====================================             ] \                     
 78% [========================================          ] |                     
 84% [===========================================       ] /                     
 89% [=============================================     ] -                     
 94% [================================================  ] \                     done.
Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_6.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 158.89 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 158.89 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 158.89 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.53 MB
Based on canonical annotations, the following gene is in your area of interest: XBP1(-)
write fasta - Elapsed time since the previous call: 0.33 seconds
write fasta - Current memory usage: 172.53 MB
Length of region: 95 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.20 seconds
write dat - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fasta/XBP1.fasta" "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" --SHAPE "XBP1.dat"

fold - Elapsed time since the previous call: 0.13 seconds
fold - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_FE/XBP1.txt" -sh "XBP1.dat"

efn2 - Elapsed time since the previous call: 0.59 seconds
efn2 - Current memory usage: 175.99 MB
This region has 12 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 1 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 2 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 3 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 4 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 5 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 6 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 7 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 8 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 9 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp9.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 10 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp10.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 11 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp11.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/ct/XBP1.ct" 12 "/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/fold_dbn/XBP1_temp12.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.99 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).((((...((((((((((..(((.((..((((......))))..))))).....)))).))))))))))(((...)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_6.svg', '-title', 'XBP1, -54.0 ± 1.3\n kcal/mol, AUC: 0.807', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 451.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 431.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 414.4805263676723, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 400.90933942113855, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 400.90933942113855, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723908, Y: 414.4805263676723, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 431.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 451.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 451.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 80.95286268950834, Y: 436.48888170956843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 84.0095795270139, Y: 419.2579445997893, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 97.47352309500575, Y: 408.07890460953143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 114.97272276333175, Y: 408.2423747105071, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 132.35516485272248, Y: 398.35042308259375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 149.73760694211325, Y: 388.4584714546805, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 167.120049031504, Y: 378.5665198267672, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 184.50249112089477, Y: 368.6745681988539, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 201.88493321028554, Y: 358.78261657094055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 214.84156980366464, Y: 347.01910910725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 226.361584220982, Y: 330.67012541330746, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 237.88159863829935, Y: 314.3211417193649, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 249.40161305561668, Y: 297.9721580254223, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.20116436123328, Y: 279.530065347309, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 250.9155490643161, Y: 261.4995257256716, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 264.97186110177034, Y: 248.84351357776393, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.97186110177034, Y: 228.84351357776387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.97186110177034, Y: 208.84351357776387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 261.1562422351877, Y: 191.76448191632886, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 271.87758319432714, Y: 177.93317258332655, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 280.389201209575, Y: 159.83476495275005, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 276.9926109087159, Y: 142.667545579796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 284.44028281479984, Y: 126.83143400370699, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 299.82927189283174, Y: 118.49901167720265, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 308.3408970928942, Y: 100.40060742562122, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 316.8525222929566, Y: 82.30220317403979, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 325.36414749301906, Y: 64.20379892245836, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 323.78428431959276, Y: 46.77528251479117, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 333.80752999454126, Y: 32.43011963810363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 350.7163444236536, Y: 27.920003628407358, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 366.5524262141703, Y: 35.3676653650291, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 373.86236624047393, Y: 51.267788906401904, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 369.20566865134975, Y: 68.13682324101984, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 354.7740544018389, Y: 78.0351898725599, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 346.26242920177646, Y: 96.13359412414133, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 337.750804001714, Y: 114.23199837572275, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 329.23917880165163, Y: 132.33040262730407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 332.6357631911795, Y: 149.49761598547076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 325.1880942844811, Y: 165.3337211839151, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.7991136092617, Y: 173.6661442275277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 301.28749559401393, Y: 191.7645518581042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 297.47186110177034, Y: 208.84351357776387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 297.47186110177034, Y: 228.84351357776387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.47186110177034, Y: 248.84351357776393, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 310.28532363590716, Y: 259.69354514513753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 316.7949791550434, Y: 275.170379193124, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 315.5888963698989, Y: 291.9171213074013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 306.928672229314, Y: 306.3014365487176, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 292.69269206417533, Y: 315.20339565132593, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 275.96871155827336, Y: 316.69218145356297, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.448697140956, Y: 333.0411651475055, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_7.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 252.92868272363864, Y: 349.39014884144814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 241.40866830632132, Y: 365.73913253539075, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 234.69026134894352, Y: 381.89812408669303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 217.95935460564468, Y: 387.0290849662005, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 200.5769125162539, Y: 396.92103659411384, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 183.19447042686315, Y: 406.8129882220272, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 165.81202833747238, Y: 416.70493984994044, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 148.42958624808162, Y: 426.5968914778537, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 131.04714415869086, Y: 436.48884310576705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 451.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 122.25, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 139.75, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 140.69020113855714, Y: 454.1422231483421, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 156.0, Y: 445.665145189837, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 171.30979886144286, Y: 454.1422231483421, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.25, Y: 471.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.25, Y: 491.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 172.25, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 207.25, Y: 511.61697103526353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 531.6169710352635, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996939, Y: 409.7352425620348, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 66.0770137056549, Y: 453.3704296504974, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 205.22768116209718, Y: 327.89805238960764, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 249.20481100500638, Y: 171.45793570186282, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 348.7533686104608, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 325.3317883284326, Y: 178.97448254329555, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 284.1688322852227, Y: 332.72946970972816, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 146.98968783134225, Y: 439.9822259506206, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 184.51092021861837, Y: 443.5281059107049, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 203.5, Y: 531.6169710352635, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -54.0 ± 1.3
 kcal/mol, AUC: 0.807', X: 123.30618312023697, Y: 544.4169710352635, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 384.36236624047393, 544.4169710352635)
Updated viewBox: -0.25 -5.0 389.61236624047393 554.4169710352635
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_6.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_6.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '((((((((((((((((.....))))((((((((..(((.((..((((......))))..))))).....)))).)))))))))).))...)))).', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_7.svg', '-title', 'XBP1, -49.9 ± 1.3\n kcal/mol, AUC: 0.805', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 566.0125328260491, Y: 350.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 566.0125328260491, Y: 330.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 566.0125328260491, Y: 310.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 566.0125328260491, Y: 290.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 557.215416060512, Y: 275.44847993888135, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 539.8329129877345, Y: 265.5566354736221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 524.3262671022727, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 504.32626710227265, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 484.32626710227265, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 464.32626710227265, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 444.32626710227265, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 424.32626710227265, Y: 261.45339688154013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 409.17073837121706, Y: 270.20342139274385, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 399.17069708907655, Y: 287.5239056341121, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 389.17065580693605, Y: 304.8443898754804, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 379.17061452479555, Y: 322.16487411684864, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.83403680483013, Y: 339.50820748723123, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.9310516130619, Y: 350.13636869202765, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 345.5821303011541, Y: 347.84164928632725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 334.92045049624124, Y: 333.96435158197653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 337.1732982251876, Y: 316.60994335386783, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 351.0248276325721, Y: 305.91480703337027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 361.0248689147126, Y: 288.594322792002, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 371.0249101968531, Y: 271.27383855063374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 381.0249514789936, Y: 253.9533543092655, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 381.02498276147475, Y: 236.45335430929347, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 371.0250034025663, Y: 219.1328343164814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 361.0250240436579, Y: 201.81231432366926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 351.0250446847494, Y: 184.49179433085712, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 339.1810998989965, Y: 171.60864597444876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 322.76071186001053, Y: 160.19064016567776, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 306.3403238210246, Y: 148.77263435690688, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 289.91993578203864, Y: 137.35462854813588, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 271.4295836347458, Y: 141.6670974071022, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 253.31246171547554, Y: 135.9872731534176, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 240.5935135777642, Y: 121.89050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 220.5935135777642, Y: 121.89050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 200.5935135777642, Y: 121.89050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 183.5144819163292, Y: 125.70612400528626, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 169.6831725833269, Y: 114.98478304614673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 151.5847649527504, Y: 106.47316503089894, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 134.41754557979647, Y: 109.86975533175803, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 118.58143400370743, Y: 102.42208342567403, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 110.24901167720297, Y: 87.03309434764219, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 92.15060742562143, Y: 78.52146914757975, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 74.05220317404, Y: 70.00984394751731, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 55.953798922458574, Y: 61.49821874745487, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 38.525282514791215, Y: 63.07808192088112, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 24.180119638103733, Y: 53.05483624593262, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 19.670003628407457, Y: 36.146021816820394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 27.117665365029197, Y: 20.309940026303593, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 43.01778890640195, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 59.886823241019826, Y: 17.656697589124065, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 69.78518987256, Y: 32.088311838635036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 87.88359412414142, Y: 40.599937038697476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 105.98199837572285, Y: 49.111562238759916, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 124.08040262730441, Y: 57.623187438822356, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 141.2476159854711, Y: 54.226603049294454, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 157.08372118391543, Y: 61.67427195599282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 165.41614422752804, Y: 77.06325263121221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 183.51455185810454, Y: 85.57487064646, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 200.5935135777642, Y: 89.39050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 220.5935135777642, Y: 89.39050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.5935135777642, Y: 89.39050513870359, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 251.4133992685458, Y: 76.59919283545321, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 266.84656778462744, Y: 70.07961414085275, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 283.5600870374191, Y: 71.23973093989525, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.9445216363303, Y: 79.82900553502304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 306.893423051302, Y: 93.99250652404339, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 308.4741952212914, Y: 110.67149798478374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 324.89458326027733, Y: 122.08950379355474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 341.3149712992633, Y: 133.5075096023256, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 357.7353593382492, Y: 144.92551541109654, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 373.93586511506834, Y: 151.54318966836016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 379.17088967306915, Y: 168.24182787263086, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 389.1708690319776, Y: 185.562347865443, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 399.170848390886, Y: 202.88286785825514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 409.17082774979446, Y: 220.20338785106728, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 424.32626710227265, Y: 228.95339688154016, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_8.svg


Warning: Font Verdana not found. Using default font.
Text: 'G', X: 444.32626710227265, Y: 228.95339688154016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 464.32626710227265, Y: 228.95339688154016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 484.32626710227265, Y: 228.95339688154016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 504.32626710227265, Y: 228.95339688154016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 524.3262671022726, Y: 228.95339688154016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 542.1818841471264, Y: 225.32719791112592, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 555.9071602437808, Y: 237.31006798035864, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 573.2896633165584, Y: 247.20191244561786, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 590.7888989153622, Y: 247.03834760356855, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 604.2529138811684, Y: 258.217359232534, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 607.3096769847399, Y: 275.4483255237391, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 598.5125328260491, Y: 290.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 598.5125328260491, Y: 310.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 598.5125328260491, Y: 330.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 598.5125328260491, Y: 350.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 616.0125328260491, Y: 350.57645345323556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 566.7625328260491, Y: 370.57645345323556, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 460.57626710227265, Y: 281.45339688154013, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 311.8581812529595, Y: 339.1639916344219, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 316.34692109712364, Y: 177.59146466283858, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 159.4579357018635, Y: 133.9075552354676, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: -4.0, Y: 34.35899763001328, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 166.97448254329584, Y: 57.78057791204134, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 320.69302320600616, Y: 98.63004737472062, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 440.57626710227265, Y: 208.95339688154016, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 623.2522206573913, Y: 278.94170836859263, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 612.2625328260491, Y: 370.57645345323556, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -49.9 ± 1.3
 kcal/mol, AUC: 0.805', X: 251.84126822722828, Y: 383.37645345323557, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 641.2522206573913, 383.37645345323557)
Updated viewBox: -9.0 0.0 655.2522206573913 388.37645345323557
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_7.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).(((..((((((.((((((..(.((((...((.....(((.....))))).)))).))))))))))))))))........', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_8.svg', '-title', 'XBP1, -53.0 ± 1.9\n kcal/mol, AUC: 0.773', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 205.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 185.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 165.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 145.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 128.31199528013207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 114.7408083335983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 114.7408083335983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 128.31199528013207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 145.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 165.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 185.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 205.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 205.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 185.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 83.07162956608738, Y: 169.25535227218143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.77478317994087, Y: 153.07250790694616, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 105.94734630476015, Y: 146.34458682431756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 120.08948192849107, Y: 132.20245120058658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 134.23161755222202, Y: 118.0603155768556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 148.37375317595297, Y: 103.91817995312465, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 162.51588879968392, Y: 89.77604432939367, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 176.65802442341487, Y: 75.63390870566272, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 186.03667355233137, Y: 60.859159626778336, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 203.39801907000674, Y: 58.66007990034413, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.21414865171704, Y: 51.881195953536434, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 241.03027823342734, Y: 45.10231200672874, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.8464078151376, Y: 38.32342805992104, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 278.6625373968479, Y: 31.544544113113346, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 297.4786669785582, Y: 24.76566016630565, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 310.4331066714257, Y: 12.999999999999972, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 327.9147416657005, Y: 13.800440398831341, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 339.739790896421, Y: 26.700691466007044, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 357.2214025606906, Y: 27.501100098457783, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 369.04647273779034, Y: 40.401298378557584, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 387.1644236128658, Y: 48.87123675426923, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 405.28237448794124, Y: 57.341175129980826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 423.4003253630167, Y: 65.81111350569248, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 440.55967949050864, Y: 62.37501820279758, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 456.41289055906304, Y: 69.78621809344392, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 464.78071333962725, Y: 85.15598474477346, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 462.4015480988248, Y: 102.49350930164746, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 471.9647695019124, Y: 120.05895254671043, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 488.409500747994, Y: 126.04393992344222, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 498.90524911868886, Y: 140.04710120204456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 500.035738450401, Y: 157.5105273700786, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 491.4330041520669, Y: 172.75002284229674, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 475.8971625267038, Y: 180.80526241956113, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 458.48499690710577, Y: 179.05433463944576, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 442.242032865298, Y: 190.72335855477553, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 425.9990688234902, Y: 202.39238247010533, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 416.73086350434835, Y: 217.23661293179975, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 399.6855663423802, Y: 221.200027179373, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 384.8190138270256, Y: 211.96766972605312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 380.81447880463804, Y: 194.93198637926196, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 390.0109346307586, Y: 180.04319838037236, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 407.0369049610793, Y: 175.99756590216762, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 423.2798690028871, Y: 164.32854198683785, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 439.5228330446949, Y: 152.65951807150805, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 443.4209242286851, Y: 135.5991873267277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 433.85770282559747, Y: 118.03374408166476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 418.0044972809775, Y: 110.62254485616626, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 409.63667550248533, Y: 95.25278367769008, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 391.5187246274099, Y: 86.78284530197848, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 373.40077375233443, Y: 78.31290692626683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 355.282822877259, Y: 69.84296855055518, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 337.80113561253546, Y: 69.0425871549671, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 325.97603785163705, Y: 56.14231340030611, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 308.49435339212073, Y: 55.341870736584866, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 289.67822381041043, Y: 62.12075468339256, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.86209422870013, Y: 68.89963863020026, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 252.04596464698983, Y: 75.67852257700795, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.22983506527953, Y: 82.45740652381565, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.41370548356923, Y: 89.23629047062335, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 199.63899481197768, Y: 98.6148790942255, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 185.49685918824673, Y: 112.75701471795645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 171.35472356451578, Y: 126.8991503416874, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.21258794078483, Y: 141.0412859654184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 143.0704523170539, Y: 155.18342158914936, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 128.92831669332296, Y: 169.3255572128803, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 185.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 205.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 225.44843994772327, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_5.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 174.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.25, Y: 225.44843994772327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 245.44843994772327, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996942, Y: 123.56671147449453, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 59.32163542570545, Y: 169.24004264486405, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 211.68526470490934, Y: 33.065066371826134, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 391.88436198857744, Y: 30.753285879193783, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 515.7832593015786, Y: 161.96548872321029, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 374.5527485006147, Y: 163.8284403636178, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 343.06286862703786, Y: 87.96091200446742, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 195.8889948119777, Y: 126.8991503416874, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 171.0, Y: 245.44843994772327, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 258.5, Y: 245.44843994772327, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -53.0 ± 1.9
 kcal/mol, AUC: 0.773', X: 186.3928692252005, Y: 258.2484399477233, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 4.999999999999972, 533.7832593015786, 258.2484399477233)
Updated viewBox: -0.25 -2.842170943040401e-14 539.0332593015786 263.24843994772334
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_8.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '((((((....))))).)....((((((....(((..(((....)))..))).)))))).(((.((.((((((.........)))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_5.svg', '-title', 'XBP1, -52.3 ± 1.4\n kcal/mol, AUC: 0.845', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 53.115738679607745, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 49.3001354389298, Y: 267.4118299967896, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.788643593360604, Y: 249.3133630295902, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 32.277151747791436, Y: 231.21489606239075, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 23.765659902222268, Y: 213.1164290951913, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 15.254168056653072, Y: 195.01796212799186, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 181.0210444303637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 8.972689185365681, Y: 164.03810747469012, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 24.808880141602828, Y: 156.5905368913267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.58267402998024, Y: 164.1693678014061, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 44.66417687835215, Y: 181.18678787894194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 53.17566872392135, Y: 199.28525484614138, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 61.687160569490516, Y: 217.38372181334083, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 70.19865241505971, Y: 235.48218878054027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 78.71014426062888, Y: 253.5806557477397, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.43137317185133, Y: 267.41196988028577, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 85.61573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 103.11573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 120.61573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 138.11573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 155.61573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 173.11573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 173.11573867960774, Y: 264.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 173.11573867960774, Y: 244.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 173.11573867960774, Y: 224.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 173.11573867960774, Y: 204.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 173.11573867960774, Y: 184.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 161.75096042773487, Y: 171.8283174634026, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 158.8829668704069, Y: 155.05707438364428, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 165.3942102779152, Y: 139.33754224132534, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 179.28124768132622, Y: 129.5064602234862, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 196.271179773405, Y: 128.5887516685688, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 210.41331539713596, Y: 114.44661604483784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 224.5554510208669, Y: 100.30448042110689, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 227.17864457694074, Y: 83.00219794442572, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 239.55301573945837, Y: 70.62782678190811, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 256.85529821613954, Y: 68.00463322583428, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.9974338398705, Y: 53.8624976021033, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 285.13956946360145, Y: 39.72036197837241, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.74753154363657, Y: 25.093731598643956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 312.15643222800486, Y: 23.31007564572343, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 324.5308261848131, Y: 35.684469602531806, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 322.7471702318927, Y: 53.0933702869001, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 308.12053985216426, Y: 62.70133236693516, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 293.9784042284333, Y: 76.84346799066614, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 279.83626860470235, Y: 90.98560361439709, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.2130750486285, Y: 108.28788609107826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 264.8387038861109, Y: 120.66225725359587, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 247.53642140942975, Y: 123.2854508096697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 233.39428578569877, Y: 137.42758643340065, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 219.2521501619678, Y: 151.5697220571316, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 217.70464524916113, Y: 170.2135225948619, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.61573867960774, Y: 184.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.61573867960774, Y: 204.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.61573867960774, Y: 224.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.61573867960774, Y: 244.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 205.61573867960774, Y: 264.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 205.61573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 223.11573867960774, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.61573867960772, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 240.61573867960772, Y: 264.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 240.61573867960772, Y: 244.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.9373615281185, Y: 228.3153951698627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.61573867960772, Y: 212.13985873977995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.61573867960772, Y: 192.13985873977995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 236.80011981302505, Y: 175.06082707834494, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 247.52146077216457, Y: 161.22951774534252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 256.03307878741236, Y: 143.13111011476607, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.54469680266016, Y: 125.03270248418963, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 273.05631481790795, Y: 106.93429485361312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 281.5679328331558, Y: 88.83588722303662, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 290.07955084840364, Y: 70.73747959246018, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 283.8759732171286, Y: 54.37395000178287, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 286.7488838923323, Y: 37.11139340246865, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.9178733931934, Y: 23.63908292423656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 314.3489506621776, Y: 17.616693375817988, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 331.57870909514077, Y: 20.680171861781616, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 344.92678499355316, Y: 31.997342263540588, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 350.7672511499486, Y: 48.493961043406614, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 347.51357889143594, Y: 65.6888176268856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 336.0496093690624, Y: 78.91102919992889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 319.4894632480904, Y: 84.56885886723788, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 310.9778452328426, Y: 102.66726649781438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 302.4662272175948, Y: 120.76567412839083, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 293.95460920234694, Y: 138.86408175896727, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 285.4429911870991, Y: 156.96248938954378, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 276.9313731718513, Y: 175.06089702012025, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 273.1157386796077, Y: 192.13985873977995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 273.1157386796077, Y: 212.13985873977995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 279.794115831097, Y: 228.3153951698627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 273.1157386796077, Y: 244.49093159994547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 273.1157386796077, Y: 264.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 273.1157386796077, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 290.6157386796077, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_2.svg


Text: 'C', X: 308.1157386796077, Y: 284.4909315999455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 53.865738679607745, Y: 304.4909315999455, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 52.394869995573146, Y: 151.60680211089195, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 134.36573867960774, Y: 304.4909315999455, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 146.01424629255047, Y: 126.85939230568977, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 280.6146446602346, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 243.78642140942975, Y: 151.5697220571316, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 222.72360305587677, Y: 298.63306722367645, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 251.20790718733144, Y: 98.42267683836536, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 361.7668322434533, Y: 74.39989498523093, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 296.044115831097, Y: 228.3153951698627, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 304.3657386796077, Y: 304.4909315999455, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -52.3 ± 1.4
 kcal/mol, AUC: 0.845', X: 111.7586255749743, Y: 317.2909315999455, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 379.7668322434533, 317.2909315999455)
Updated viewBox: -0.25 -5.0 385.0168322434533 327.2909315999455
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_5.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_5.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).(((..(((((..........)).))).)))......(((((.(((((....((.....))...))))))))))......', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_2.svg', '-title', 'XBP1, -52.1 ± 1.3\n kcal/mol, AUC: 0.89', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 212.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 195.0861384301906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 181.51495148365683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 181.51495148365683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 195.0861384301906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 212.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 80.95286497225463, Y: 237.09450664001815, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 84.0095663877714, Y: 219.86357925741032, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 97.47348615648586, Y: 208.6845298134752, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.35284558024283, Y: 189.9049021835469, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 111.23220500399981, Y: 171.12527455361862, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 114.57332253584241, Y: 152.29106546937766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 114.57332253584241, Y: 132.29106546937766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 101.27339525330451, Y: 120.91736567609496, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 94.83942067470655, Y: 104.64305819987743, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 96.76633869389758, Y: 87.24949330777349, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 106.60642814196791, Y: 72.77808175386866, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.0733352114442, Y: 64.59126928425036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.57330986024056, Y: 64.59126928425036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 155.04021692971688, Y: 72.77808175386866, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 164.88030637778724, Y: 87.24949330777349, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 166.80722439697828, Y: 104.64305819987743, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 160.37324981838032, Y: 120.91736567609496, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 147.0733225358424, Y: 132.29106546937766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 147.0733225358424, Y: 152.29106546937766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 151.0675386095773, Y: 168.4784568733072, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 141.74909990263328, Y: 182.3042336172237, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 134.8697404788763, Y: 201.083861247152, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 127.99038105511931, Y: 219.86348887708027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 131.04714415869086, Y: 237.0944551682853, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 157.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 192.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 227.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 252.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 232.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.75, Y: 212.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 240.93438113341733, Y: 195.1435514363468, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 251.65572209255674, Y: 181.3122421033444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 260.16734010780453, Y: 163.21383447276793, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 268.6789581230523, Y: 145.11542684219143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.1905761383001, Y: 127.01701921161492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 285.7021941535479, Y: 108.91861158103853, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 278.4733764690484, Y: 92.21243741921893, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 280.3279918444098, Y: 74.10408404155766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 290.7932248123228, Y: 59.21009333496437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.20106987581954, Y: 51.32753787286532, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 325.3685125757831, Y: 52.46599559466375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 339.51064819951404, Y: 38.3238599709328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 346.2563554594759, Y: 22.176221090880915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.4363625610173, Y: 15.50852448472557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 378.6002326141121, Y: 22.215245944897617, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 385.30695407428414, Y: 38.379115997992415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 378.6392574681288, Y: 54.55912309953379, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.49161858807685, Y: 61.30483035949561, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 348.3494829643459, Y: 75.44696598322656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.76412803873734, Y: 92.00539013555692, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 343.6010520068339, Y: 107.43909108250915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 331.1698650184543, Y: 118.46851632387677, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 315.11210655323475, Y: 122.74999085581618, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 306.60048853798696, Y: 140.84839848639263, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 298.08887052273917, Y: 158.94680611696907, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 289.5772525074914, Y: 177.04521374754557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 281.0656344922436, Y: 195.14362137812208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 212.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 232.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 252.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 294.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 312.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 329.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 347.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 364.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 382.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 312.2225830977818, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996942, Y: 190.34085462455312, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 57.51032847852716, Y: 240.58792995293226, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 89.51558679373247, Y: 57.87768068137359, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 157.3095426870954, Y: 187.51065268103474, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 188.5, Y: 312.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 238.31893247722803, Y: 154.70221645752017, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 328.3983876546337, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 325.87771458814547, Y: 136.50851996967262, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 291.0, Y: 312.2225830977818, Width: 18.0, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_10.svg


Warning: Font Verdana not found. Using default font.
Text: '95', X: 378.5, Y: 312.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -52.1 ± 1.3
 kcal/mol, AUC: 0.89', X: 133.52847703714207, Y: 325.0225830977818, Width: 133.5, Height: 23
Calculated bounding box: (4.75, 0.0, 396.5, 325.0225830977818)
Updated viewBox: -0.25 -5.0 401.75 335.0225830977818
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_2.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....)))))((((.((...))))))(((..(((....)))..))).(((((.(((((....((.....))...))))))))))......', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_10.svg', '-title', 'XBP1, -52.0 ± 1.4\n kcal/mol, AUC: 0.747', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 212.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 195.0861384301906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 181.51495148365683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 181.51495148365683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.298734387239094, Y: 195.0861384301906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 212.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.25, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 68.43438113341733, Y: 215.1435514363468, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 79.15572209255677, Y: 201.31224210334437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 87.66734010780456, Y: 183.2138344727679, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 95.95506622713323, Y: 167.8007105952599, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 113.41689772737325, Y: 166.64518796474374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 123.66336428078608, Y: 180.83182657514763, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.07725250749135, Y: 197.04521374754557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 108.56563449224356, Y: 215.14362137812208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.75, Y: 232.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 104.75, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 104.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 122.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 111.87031668259823, Y: 238.1331438766507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 111.87031668259823, Y: 220.63314035277978, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 206.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 186.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 122.25, Y: 166.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 118.70126561276089, Y: 149.40725646405753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 129.749982120067, Y: 135.83606951752375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 147.25001787993295, Y: 135.83606951752375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 158.2987343872391, Y: 149.40725646405753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 154.75, Y: 166.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 154.75, Y: 186.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 154.75, Y: 206.54370113164867, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 165.12968331740177, Y: 220.63314035277978, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 165.12968331740177, Y: 238.1331438766507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 154.75, Y: 252.22258309778178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 154.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 154.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 172.25, Y: 292.2225830977818, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 252.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 232.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 189.75, Y: 212.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 185.93438113341733, Y: 195.1435514363468, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 196.65572209255677, Y: 181.3122421033444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.16734010780456, Y: 163.21383447276793, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 213.67895812305235, Y: 145.11542684219143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.19057613830014, Y: 127.01701921161492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 230.70219415354794, Y: 108.91861158103853, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 223.4733764690484, Y: 92.21243741921893, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.32799184440984, Y: 74.10408404155766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 235.79322481232288, Y: 59.21009333496437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 252.2010698758196, Y: 51.32753787286532, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.36851257578314, Y: 52.46599559466375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 284.5106481995141, Y: 38.3238599709328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 291.25635545947597, Y: 22.176221090880915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.43636256101735, Y: 15.50852448472557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 323.6002326141121, Y: 22.215245944897617, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 330.3069540742842, Y: 38.379115997992415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 323.63925746812885, Y: 54.55912309953379, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.4916185880769, Y: 61.30483035949561, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 293.34948296434595, Y: 75.44696598322656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.76412803873734, Y: 92.00539013555692, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 288.6010520068339, Y: 107.43909108250915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 276.1698650184543, Y: 118.46851632387677, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 260.11210655323475, Y: 122.74999085581618, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 251.60048853798696, Y: 140.84839848639263, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 243.08887052273917, Y: 158.94680611696907, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.57725250749135, Y: 177.04521374754557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 226.06563449224356, Y: 195.14362137812208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 222.25, Y: 212.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.25, Y: 232.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.25, Y: 252.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.25, Y: 272.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 239.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 257.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 274.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 292.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.75, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 327.25, Y: 292.2225830977818, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 312.2225830977818, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.9776376399694, Y: 190.34085462455312, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 45.16556773952054, Y: 210.78282630235415, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 121.0, Y: 272.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 95.52236236003057, Y: 144.66197265842007, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 171.0, Y: 272.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 183.3189324772281, Y: 154.70221645752014, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 273.3983876546338, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 270.87771458814603, Y: 136.50851996967202, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 236.0, Y: 312.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 323.5, Y: 312.2225830977818, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -52.0 ± 1.4
 kcal/mol, AUC: 0.747', X: 101.5284770371421, Y: 325.0225830977818, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 341.5, 325.0225830977818)
Updated viewBox: -0.25 -5.0 346.75 335.0225830977818
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_10.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_10.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).(((...))).((((.(((..(((....)))..))).(((((.(((((....((.....))...)))))))))).)))).', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_3.svg', '-title', 'XBP1, -52.0 ± 1.3\n kcal/mol, AUC: 0.856', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_3.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 184.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 144.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 124.86180422996269, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 107.7253595623715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 94.1541726158377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 94.1541726158377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 107.7253595623715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 124.86180422996269, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 144.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 184.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 184.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.69020113855714, Y: 147.38705634304125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 106.0, Y: 138.90997838453615, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.30979886144286, Y: 147.38705634304125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 184.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 204.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 204.8618042299627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 157.25, Y: 204.8618042299627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.25, Y: 184.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 144.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.80800274366814, Y: 132.55535984649754, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 140.3713456266226, Y: 115.62704207078043, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 123.05085983384106, Y: 105.62700347575228, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 105.73037404105955, Y: 95.62696488072407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 88.33871212855908, Y: 97.5712751934812, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 73.1832826931813, Y: 88.82123489069983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 66.17135168157847, Y: 72.78742467105661, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 48.85086985867409, Y: 62.787379200038, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 31.530388035769732, Y: 52.78733372901945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 14.915438855210851, Y: 47.29236190706871, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 8.686847387549818, Y: 30.93828290745614, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 17.436905054705335, Y: 15.782830343509374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 34.71426326931186, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 47.78046192617492, Y: 24.64155076679981, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 65.1009437490793, Y: 34.64159623781842, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 82.42142557198366, Y: 44.64164170883703, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 99.81308099495118, Y: 42.697336781937565, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 114.96850432681404, Y: 51.44737356083323, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.98043675798036, Y: 67.48117546745408, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 139.30092255076187, Y: 77.48121406248225, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 156.6214083435434, Y: 87.48125265751048, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 173.50005536842215, Y: 82.85942676187653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 190.37868694507875, Y: 87.48130907317471, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 207.69920616218891, Y: 77.48132837070739, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.01972537929908, Y: 67.48134766824012, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.3402445964092, Y: 57.48136696577285, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.6607638135194, Y: 47.48138626330558, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 273.37295339531613, Y: 35.396534510569154, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 291.29047976930167, Y: 39.00624830120205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 311.29047976930167, Y: 39.00624830120205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 331.29047976930167, Y: 39.00624830120205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 351.29047976930167, Y: 39.00624830120205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 371.29047976930167, Y: 39.00624830120205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 382.73408679148184, Y: 25.766309914884573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 399.0641796838765, Y: 19.475032121197557, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_11.svg


Warning: Font Verdana not found. Using default font.
Text: 'A', X: 416.432928333418, Y: 21.614817274110294, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 430.7477660584354, Y: 31.68147168647556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 438.6357136588135, Y: 47.30300787230783, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 458.03768604054045, Y: 52.15722950905905, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 475.3552660179745, Y: 49.636866129932514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 489.39542457203487, Y: 60.083145640577015, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 491.9575699781068, Y: 77.39459326218889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 481.5452014428842, Y: 91.45991904314309, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 464.23998698420394, Y: 94.06383155641026, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 450.1495758808198, Y: 83.68543462936537, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 430.7476034990928, Y: 78.83121299261416, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 416.43275435363967, Y: 88.89774635534235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 399.06405632010853, Y: 91.03744928332367, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 382.73403595491357, Y: 84.74615093780574, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 371.29047976930167, Y: 71.5062483012021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 351.29047976930167, Y: 71.5062483012021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 331.29047976930167, Y: 71.5062483012021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 311.29047976930167, Y: 71.5062483012021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 291.29047976930167, Y: 71.5062483012021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 275.9107324550287, Y: 75.62722999110957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 258.59021323791853, Y: 85.62721069357684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.2696940208084, Y: 95.62719139604411, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 223.94917480369824, Y: 105.62717209851141, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 206.62865558658808, Y: 115.62715280097869, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 202.19196957213413, Y: 132.55540779696537, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 144.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 164.86180422996267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 189.75, Y: 184.8618042299627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.75, Y: 204.8618042299627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 207.25, Y: 204.8618042299627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 224.86180422996267, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996942, Y: 102.98007575673401, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 69.98907978138165, Y: 136.77293910540396, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 134.18148059060678, Y: 150.0381743702152, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: -2.658587038758661, Y: 61.745607496999725, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 145.55096114579004, Y: 60.16072826970071, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 307.54047976930167, Y: 19.00624830120205, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 476.5062927714462, Y: 30.246664048423554, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 361.5070545511846, Y: 90.57448839139892, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 215.76247207710415, Y: 142.55541744572707, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 203.5, Y: 224.8618042299627, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -52.0 ± 1.3
 kcal/mol, AUC: 0.856', X: 182.3537849890534, Y: 237.6618042299627, Width: 142.5, Height: 23
Calculated bounding box: (-2.658587038758661, 5.0, 502.4575699781068, 237.6618042299627)
Updated viewBox: -7.658587038758661 0.0 515.1161570168654 242.6618042299627
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_3.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_3.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).(((..((((((.((((((.((((.((..........)).))))(((....)))...)))))))))))))))........', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_11.svg', '-title', 'XBP1, -49.9 ± 1.2\n kcal/mol, AUC: 0.736', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 401.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 381.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 361.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 341.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 324.0249551308618, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 310.45376818432806, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 310.45376818432806, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 324.0249551308618, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 341.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 361.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 381.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 401.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 401.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 381.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 83.07162956608738, Y: 364.96831212291113, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.77478317994087, Y: 348.78546775767586, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 105.94734630476015, Y: 342.0575466750473, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 120.08948192849107, Y: 327.91541105131637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 134.23161755222202, Y: 313.7732754275854, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 148.37375317595297, Y: 299.63113980385435, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 162.51588879968392, Y: 285.4890041801234, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 176.65802442341487, Y: 271.34686855639245, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 186.03667355233137, Y: 256.57211947750807, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 203.39801907000674, Y: 254.3730397510739, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.21414865171704, Y: 247.5941558042662, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 241.03027823342734, Y: 240.8152718574585, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.8464078151376, Y: 234.0363879106508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 278.6625373968479, Y: 227.2575039638431, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 297.4786669785582, Y: 220.4786200170354, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 303.70640836397035, Y: 204.36991916966562, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 316.75072168570415, Y: 193.0508690452928, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 316.75072168570415, Y: 173.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 316.75072168570415, Y: 153.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 316.75072168570415, Y: 133.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 310.0723445342149, Y: 116.87533261521003, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 316.75072168570415, Y: 100.6997961851273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 316.75072168570415, Y: 80.6997961851273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 303.45079440316624, Y: 69.32609639184454, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.0168198245683, Y: 53.05178891562707, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 298.9437378437593, Y: 35.658224023523076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 308.78382729182965, Y: 21.186812469618303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 324.25073436130594, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 341.7507090101023, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 357.21761607957865, Y: 21.18681246961819, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 367.057705527649, Y: 35.658224023523076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 368.98462354684, Y: 53.05178891562696, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 362.55064896824206, Y: 69.32609639184454, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.25072168570415, Y: 80.6997961851273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.25072168570415, Y: 100.6997961851273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 355.9290988371934, Y: 116.87533261521003, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.25072168570415, Y: 133.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 349.25072168570415, Y: 153.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 349.25072168570415, Y: 173.05086904529276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 349.25072168570415, Y: 193.0508690452928, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 364.9033628426179, Y: 208.70351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 384.9033628426179, Y: 208.70351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 404.9033628426179, Y: 208.70351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 422.0398075102091, Y: 205.15477581496745, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 435.6109944567429, Y: 216.2034923222736, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 435.6109944567429, Y: 233.7035280821395, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 422.03980751020913, Y: 244.75224458944567, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 404.9033628426179, Y: 241.20351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 384.9033628426179, Y: 241.20351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 364.9033628426179, Y: 241.20351020220656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 354.2753681429752, Y: 253.749871620013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 339.16013248542527, Y: 260.2225146024882, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 322.7457560655319, Y: 259.2562315653272, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 308.49435339212073, Y: 251.05483058731463, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_1.svg


Text: 'A', X: 289.67822381041043, Y: 257.83371453412235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.86209422870013, Y: 264.61259848093005, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 252.04596464698983, Y: 271.39148242773774, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.22983506527953, Y: 278.17036637454544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.41370548356923, Y: 284.94925032135313, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 199.63899481197768, Y: 294.32783894495526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 185.49685918824673, Y: 308.4699745686862, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 171.35472356451578, Y: 322.61211019241716, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.21258794078483, Y: 336.7542458161481, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 143.0704523170539, Y: 350.89638143987906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 128.92831669332296, Y: 365.03851706361013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 381.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 401.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 174.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.75, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 421.161399798453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.75, Y: 421.16139979845303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.25, Y: 421.16139979845303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 441.161399798453, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996942, Y: 319.2796713252243, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 59.32163542570545, Y: 364.9530024955938, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 211.68526470490934, Y: 228.77802622255592, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 286.3223445342149, Y: 116.87533261521003, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 382.0693522873478, Y: 28.729976708055517, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 378.97466990487993, Y: 199.62600974268747, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 362.40971355786655, Y: 269.83596294325093, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 195.8889948119777, Y: 322.6121101924171, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 171.0, Y: 441.161399798453, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 258.5, Y: 441.16139979845303, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -49.9 ± 1.2
 kcal/mol, AUC: 0.736', X: 154.18049722837145, Y: 453.96139979845304, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 446.1109944567429, 453.96139979845304)
Updated viewBox: -0.25 0.0 451.3609944567429 458.96139979845304
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_11.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_11.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....))))).(((...)))(((((.....(((.((..((((......))))..)))))..)))))...((.((((....))))..))..', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_1.svg', '-title', 'XBP1, -51.6 ± 1.3\n kcal/mol, AUC: 0.919', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 203.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 183.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 166.6448975531526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 153.07371060661882, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 153.07371060661882, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 166.6448975531526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 183.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 203.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.69020113855714, Y: 206.30659433382232, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 106.0, Y: 197.82951637531727, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.30979886144286, Y: 206.30659433382235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 139.75, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 139.75, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 203.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.75, Y: 183.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 126.33852095483499, Y: 172.0916319057314, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 120.1503829759977, Y: 155.41158257179114, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 122.69255849458554, Y: 137.80321975577385, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 133.34596169922455, Y: 123.5546374548151, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 149.51621202153368, Y: 116.13573578801365, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 167.26543323396274, Y: 117.35321013273952, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 181.4075688576937, Y: 103.21107450900857, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 195.54970448142464, Y: 89.06893888527762, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 204.92835361034116, Y: 74.29418980639323, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 222.2896991280165, Y: 72.09511007995903, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.10582870972678, Y: 65.31622613315133, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 250.84313390780972, Y: 50.775416865768676, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 267.3072550997335, Y: 44.84389429153387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 284.080825963197, Y: 49.833640493434444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 302.89695823602824, Y: 43.05476401636815, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.7130905088594, Y: 36.27588753930195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 340.5292227816906, Y: 29.49701106223563, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 351.73591295629643, Y: 16.056056961076592, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 368.9669798898826, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 384.112450848927, Y: 21.76720373025603, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 390.04395955247753, Y: 38.23129666970385, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 383.9697825373353, Y: 54.64329001017873, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 368.7487915240535, Y: 63.27871613705108, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 351.5448970569232, Y: 60.073226005586235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 332.72876478409205, Y: 66.8521024826525, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 313.9126325112609, Y: 73.63097895971876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 295.0965002384297, Y: 80.40985543678502, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 285.35919511350136, Y: 94.95065627112851, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 268.8950805521392, Y: 100.88217645657349, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 252.12151512328933, Y: 95.89243670343055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.305385541579, Y: 102.67132065023824, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 218.53067486998745, Y: 112.04990927384043, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 204.3885392462565, Y: 126.19204489757138, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 190.24640362252555, Y: 140.33418052130236, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 191.61468107510996, Y: 157.1960982718173, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 185.14069465046603, Y: 172.8256841008119, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.25, Y: 183.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.25, Y: 203.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 172.25, Y: 223.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 172.25, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 189.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 207.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 224.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 242.25, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.45286953776704, Y: 228.65329149883956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 236.50954010935607, Y: 211.42238357061836, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 229.63006490963818, Y: 192.64279835218326, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 222.7505897099203, Y: 173.86321313374813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 215.8711145102024, Y: 155.08362791531303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 206.64443921296345, Y: 140.2135332768816, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 212.35082267165703, Y: 123.67000162795799, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 228.78299331556028, Y: 117.65044852774926, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_4.svg


Warning: Font Verdana not found. Using default font.
Text: 'G', X: 243.82564117719528, Y: 126.59304305660024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 246.38794049015945, Y: 143.90448071577146, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 253.26741568987734, Y: 162.68406593420656, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 260.1468908895952, Y: 181.46365115264166, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 267.0263660893131, Y: 200.24323637107676, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 280.4903810551193, Y: 211.42224800004232, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 283.54714415869086, Y: 228.6532142912473, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 274.75, Y: 243.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 274.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 292.25, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 309.75, Y: 263.7813422207438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 283.7813422207438, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996942, Y: 161.89961374751505, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 69.98907978138166, Y: 195.69247709618503, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 116.90681757609363, Y: 189.73536480446253, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 209.737962502772, Y: 54.13600563736978, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 395.71163741647024, Y: 8.945251003984254, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 258.2528631567188, Y: 113.28090877668185, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 188.5, Y: 243.7813422207438, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 200.2210044914852, Y: 180.742688333466, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 294.02963912632043, Y: 201.36831566749663, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 306.0, Y: 283.7813422207438, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -51.6 ± 1.3
 kcal/mol, AUC: 0.919', X: 131.39697977623877, Y: 296.5813422207438, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.9452510039842537, 413.71163741647024, 296.5813422207438)
Updated viewBox: -0.25 -4.054748996015746 418.96163741647024 305.63609121675955
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_1.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_1.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '(((((..((((((...(((..((((((....(((..(((....)))..))).)))))).)))))).)))..)).)))((((....))))......', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_4.svg', '-title', 'XBP1, -51.4 ± 1.8\n kcal/mol, AUC: 0.846', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 119.81737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 119.81737018591798, Y: 454.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 119.81737018591798, Y: 434.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 116.00176694524004, Y: 417.72513301589555, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 107.49027509967084, Y: 399.6266660486961, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 92.10134741774755, Y: 391.2941303319081, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 84.65379219690308, Y: 375.4579638796544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 88.05050899069337, Y: 358.2907695342235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 79.53902432996372, Y: 340.19229918808196, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 71.02753966923405, Y: 322.0938288419404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 59.974648515891005, Y: 306.36336704254035, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 45.832512892160054, Y: 292.2212314188094, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 31.690377268429103, Y: 278.07909579507844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 14.772687272556482, Y: 273.60243669376143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 259.2568990132704, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 6.365670814173029, Y: 241.83167823056345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 18.855064381904867, Y: 229.57346629667387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 24.151640981628702, Y: 210.28755754641645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 29.448217581352537, Y: 191.00164879615897, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 24.97153119916419, Y: 174.08397871296324, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 32.48234076629922, Y: 158.27777671328738, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 48.42607175490508, Y: 151.06350445814644, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 60.033193473055405, Y: 134.77624792366385, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 71.64031519120573, Y: 118.48899138918136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 83.24743690935605, Y: 102.20173485469888, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 94.85455862750635, Y: 85.91447832021629, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 106.46168034565667, Y: 69.6272217857337, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.74341975215046, Y: 51.71736615515567, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 113.36403298434081, Y: 35.92495102395026, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 129.3575554323598, Y: 27.683434908570916, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 147.2213366129657, Y: 29.82835218128207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.80925427788782, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 180.80925427788782, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 200.80925427788782, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 214.89869349901892, Y: 31.24205013078756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 232.39869702288985, Y: 31.24205013078756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 246.4881362440209, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.4881362440209, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 286.4881362440209, Y: 41.62173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 303.6245809116121, Y: 38.07299906095034, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 317.19576785814587, Y: 49.12171556825649, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 317.19576785814587, Y: 66.62175132812229, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 303.6245809116121, Y: 77.67046783542844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 286.4881362440209, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 266.4881362440209, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 246.4881362440209, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 232.39869702288985, Y: 84.50141676559122, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 214.8986934990189, Y: 84.50141676559122, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 200.80925427788782, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 180.80925427788782, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 160.80925427788782, Y: 74.12173344818939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 148.84403212223742, Y: 85.13828542769022, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 132.92847221419075, Y: 88.48879457772807, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.32135049604045, Y: 104.77605111221055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 109.71422877789013, Y: 121.06330764669303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 98.1071070597398, Y: 137.35056418117563, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 86.49998534158948, Y: 153.63782071565822, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 74.89286362343915, Y: 169.9250772501407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 73.27722969533954, Y: 187.35033842495164, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 60.78781930052094, Y: 199.6085857707102, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 55.4912427007971, Y: 218.89449452096767, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 50.19466610107327, Y: 238.18040327122515, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.671347656991884, Y: 255.09812540651563, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 68.81348328072283, Y: 269.2402610302466, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 82.95561890445379, Y: 283.3823966539776, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 97.19468379406615, Y: 291.95933454128965, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 100.43755398171402, Y: 308.26266626825475, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 108.9490386424437, Y: 326.3611366143963, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.46052330317335, Y: 344.4596069605378, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 132.84944258227887, Y: 352.7921433943719, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 140.29699480378477, Y: 368.62830346895896, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 136.90028392136995, Y: 385.7954917996462, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 145.41177576693912, Y: 403.8939587668456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 156.13300467816157, Y: 417.7252728993917, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 152.31737018591798, Y: 434.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 152.31737018591798, Y: 454.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 152.31737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 169.81737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 169.81737018591798, Y: 454.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 169.81737018591798, Y: 434.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 169.81737018591798, Y: 414.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 166.26863579867887, Y: 397.66778995146024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 177.317352305985, Y: 384.0966030049264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 194.81738806585096, Y: 384.0966030049264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.8661045731571, Y: 397.66778995146024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 202.31737018591798, Y: 414.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 202.31737018591798, Y: 434.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 202.31737018591798, Y: 454.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 202.31737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 219.81737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 237.31737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_9.svg


Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.81737018591798, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 272.317370185918, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 289.817370185918, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 307.317370185918, Y: 474.8042346190514, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 120.56737018591798, Y: 494.8042346190514, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 49.17906932309249, Y: 330.60531350267, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 1.3069488966014866, Y: 172.23751947581326, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 122.06320920208671, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 304.61986471724964, Y: 18.644095808220015, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 177.05925427788782, Y: 94.12173344818939, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 75.78510306123793, Y: 206.57560461632534, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 143.63655850385877, Y: 339.05634124515075, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 146.06737018591798, Y: 434.8042346190514, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 216.06737018591798, Y: 494.8042346190514, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 303.567370185918, Y: 494.8042346190514, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -51.4 ± 1.8
 kcal/mol, AUC: 0.846', X: 94.97288392907294, Y: 507.6042346190514, Width: 142.5, Height: 23
Calculated bounding box: (1.3069488966014866, 0.0, 327.69576785814587, 507.6042346190514)
Updated viewBox: -3.6930511033985134 -5.0 336.38881896154436 517.6042346190513
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '.(((((....)))))((((.((...))))))......(((((..........(((((.(((((....((.....))...)))))))))).)))))', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_9.svg', '-title', 'XBP1, -50.3 ± 1.2\n kcal/mol, AUC: 0.763', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 138.5443416868852, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.25, Y: 118.54434168688519, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 18.701265612760892, Y: 101.40789701929404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 29.749982120067017, Y: 87.83671007276024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.25001787993298, Y: 87.83671007276024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.29873438723911, Y: 101.40789701929404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 118.54434168688519, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 138.5443416868852, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.25, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.25, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 138.5443416868852, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 68.43438113341733, Y: 121.46531002545021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 79.15572209255677, Y: 107.63400069244781, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 87.66734010780456, Y: 89.53559306187134, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 95.95506622713322, Y: 74.12246918436335, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 113.41689772737325, Y: 72.96694655384721, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 123.66336428078608, Y: 87.15358516425107, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.07725250749135, Y: 103.36697233664901, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 108.56563449224356, Y: 121.46537996722549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.75, Y: 138.5443416868852, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 104.75, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 104.75, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 139.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 174.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.25, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.25, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.25, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 138.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 118.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 212.61348864046082, Y: 109.86492352357291, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 202.02846456104618, Y: 96.54137183230964, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 196.88340086959096, Y: 80.32138157206526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 197.8531928256702, Y: 63.332583262782805, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 204.8106295659822, Y: 47.80345455457416, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 216.84308077991932, Y: 35.77100334063704, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 232.37220948812796, Y: 28.813566600325032, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 249.36100779741042, Y: 27.843774644245798, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 265.58099805765477, Y: 32.98883833570102, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 278.9045497489181, Y: 43.573862415115684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 287.5839679122304, Y: 58.21037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.5839679122304, Y: 58.21037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 327.5839679122304, Y: 58.21037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 347.5839679122304, Y: 58.21037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 367.5839679122304, Y: 58.21037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 384.6629995736654, Y: 54.39475490807217, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 398.4943089066678, Y: 65.11609586721164, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 416.59271653724437, Y: 73.62771388245949, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 434.6911241678209, Y: 82.13933189770728, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 452.7895317983974, Y: 90.65094991295513, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 470.8879394289739, Y: 99.16256792820289, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 487.5941135907935, Y: 91.9337502437034, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 505.7024669684547, Y: 93.78836561906485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 520.596457675048, Y: 104.25359858697786, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 528.479013137147, Y: 120.66144365047458, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 527.3405554153486, Y: 138.82888635043813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 541.4826910390796, Y: 152.9710219741691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 557.6303299191314, Y: 159.71672923413092, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 564.2980265252868, Y: 175.89673633567236, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 557.5913050651147, Y: 192.0606063887671, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 541.4274350120199, Y: 198.7673278489392, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 525.2474279104786, Y: 192.0996312427838, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 518.5017206505167, Y: 175.9519923627319, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 504.3595850267858, Y: 161.80985673900094, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 487.80116087445543, Y: 163.22450181339235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 472.36745992750315, Y: 157.06142578148894, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 461.3380346861356, Y: 144.63023879310927, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 457.0565601541962, Y: 128.57248032788968, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 438.9581525236197, Y: 120.06086231264189, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 420.85974489304317, Y: 111.54924429739404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 402.76133726246667, Y: 103.03762628214625, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 384.6629296318901, Y: 94.52600826689843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 367.5839679122304, Y: 90.71037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 347.5839679122304, Y: 90.71037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 327.5839679122304, Y: 90.71037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 307.5839679122304, Y: 90.71037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 287.5839679122304, Y: 90.71037377465484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 276.72242260045584, Y: 107.68279637511066, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 118.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 138.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.75, Y: 158.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 178.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.75, Y: 198.54434168688522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 218.54434168688522, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 73.97763763996943, Y: 96.66261321365658, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 45.16556773952054, Y: 117.10458489145756, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 121.0, Y: 178.54434168688522, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 203.5, Y: 158.54434168688522, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_11.svg


Text: '50', X: 248.10592420250083, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 421.3543345524922, Y: 55.52930625188304, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 568.0565510100123, Y: 145.60876142928876, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 439.5480310403399, Y: 143.08808836280053, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 287.1145582241868, Y: 121.8249319988416, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 256.0, Y: 218.54434168688522, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -50.3 ± 1.2
 kcal/mol, AUC: 0.763', X: 218.5240132626434, Y: 231.34434168688523, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 586.0565510100123, 231.34434168688523)
Updated viewBox: -0.25 -5.0 591.3065510100123 241.34434168688523
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_9.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_9.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CGCCGGAGCCCCGGCCGGCCAGGCCCUGCCGCUCAUGGUGCCAGCCCAGAGAGGGGCCAGCCCGGAGGCAGCGAGCGGGGGGCUGCCCCAGGCGC', '-structureDBN', '(((((((((...((((.....)))).....)))).)))))...((((......))))..(((.((.((((((.........)))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_11.svg', '-title', 'XBP1, -49.2 ± 1.2\n kcal/mol, AUC: 0.736', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,5,6,8,13,14,17,18,22,23,27,28,31,33,36,37,38,39,40,44,49,51,53,54,55,56,60,64,65,67,68,71,73,75,77,78,79,80,81,82,84,85,91,92,94', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '4,69,11,12,46,93,87,24,25,26,88,61,62', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,3,72,9,10,76,15,16,19,83,86,89,90,29,30,32,34,41,42,45,47,57,58,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,35,70,7,74,43,48,50,20,21,52,59,95']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.99654363904253, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 135.99654363904253, Y: 299.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.99654363904253, Y: 279.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.99654363904253, Y: 259.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 135.99654363904253, Y: 239.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 132.18094039836458, Y: 222.68503539788375, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 123.66944855279539, Y: 204.58656843068428, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 115.15795670722622, Y: 186.48810146348484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 106.64646486165702, Y: 168.3896344962854, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 88.62027123788579, Y: 164.0878624147959, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 74.65034619419743, Y: 151.91042040604458, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 67.92887528234104, Y: 134.6399042474626, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 69.9917423574002, Y: 116.22269818808951, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 55.84960673366925, Y: 102.08056256435856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 41.7074711099383, Y: 87.93842694062761, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 27.565335486207346, Y: 73.79629131689666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 11.417696606155403, Y: 67.05058405693472, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 4.75, Y: 50.87057695539329, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 11.456721460172105, Y: 34.70670690229849, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 27.620591513266845, Y: 27.999985442126444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 43.80059861480828, Y: 34.66768204828179, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 50.5463058747701, Y: 50.81532092833379, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 64.68844149850105, Y: 64.9574565520648, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 78.830577122232, Y: 79.09959217579575, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 92.97271274596301, Y: 93.2417277995267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 109.6311332212486, Y: 90.98996929134108, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 125.676767637036, Y: 96.00105752699443, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 138.09299967580537, Y: 107.33289634821125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.54554904675018, Y: 122.85507389281247, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 143.82132157000788, Y: 139.64938494365742, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 136.05647368335613, Y: 154.55846024723547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.5679655289253, Y: 172.65692721443492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 153.0794573744945, Y: 190.75539418163436, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 161.59094922006366, Y: 208.8538611488338, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 172.3121781312861, Y: 222.68517528137988, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 168.49654363904253, Y: 239.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 168.49654363904253, Y: 259.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 168.49654363904253, Y: 279.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 168.49654363904253, Y: 299.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 168.49654363904253, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 185.99654363904253, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 203.49654363904253, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 220.99654363904253, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 238.49654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.49654363904256, Y: 299.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.49654363904256, Y: 279.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.49654363904256, Y: 259.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 229.64964354753968, Y: 244.6650803884548, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 232.61484866243563, Y: 227.41814702493573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 245.99655575592135, Y: 216.1407773367847, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 263.49653152216376, Y: 216.1407773367847, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 276.8782386156494, Y: 227.41814702493573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 279.84344373054535, Y: 244.66508038845484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.99654363904256, Y: 259.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.99654363904256, Y: 279.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.99654363904256, Y: 299.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 270.99654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 288.49654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 305.99654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 323.49654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 323.49654363904256, Y: 299.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 323.49654363904256, Y: 279.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 316.8181664875533, Y: 263.5886005709568, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 323.49654363904256, Y: 247.4130641408741, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 323.49654363904256, Y: 227.41306414087407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 319.6809247724599, Y: 210.3340324794391, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 330.4022657315993, Y: 196.50272314643667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 338.9138837468471, Y: 178.40431551586022, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 347.42550176209494, Y: 160.30590788528372, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 355.9371197773428, Y: 142.2075002547072, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 364.4487377925906, Y: 124.10909262413077, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 372.96035580783837, Y: 106.01068499355432, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 366.75677817656344, Y: 89.64715540287699, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 369.629688851767, Y: 72.38459880356271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 380.79867835262826, Y: 58.912288325330564, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 397.2297556216123, Y: 52.889898776912105, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 414.4595140545755, Y: 55.95337726287573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 427.8075899529879, Y: 67.27054766463476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 433.64805610938345, Y: 83.76716644450067, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 430.3943838508708, Y: 100.96202302797974, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 418.93041432849725, Y: 114.18423460102298, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 402.3702682075252, Y: 119.84206426833197, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 393.8586501922773, Y: 137.94047189890847, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 385.3470321770295, Y: 156.03887952948497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.8354141617817, Y: 174.13728716006142, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 368.32379614653394, Y: 192.23569479063787, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 359.8121781312861, Y: 210.33410242121437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 355.99654363904256, Y: 227.41306414087407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 355.99654363904256, Y: 247.41306414087407, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 362.6749207905318, Y: 263.5886005709568, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 355.99654363904256, Y: 279.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 355.99654363904256, Y: 299.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 355.99654363904256, Y: 319.76413700103956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 373.49654363904256, Y: 319.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 390.99654363904256, Y: 319.7641370010396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 136.74654363904253, Y: 339.76413700103956, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 75.71273578554418, Y: 181.868175810209, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 23.84646031500374, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 159.39072467430088, Y: 144.8224559555259, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 178.88867926277348, Y: 333.9062726247705, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 235.38608981948647, Y: 197.35423941371286, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 305.6044080153116, Y: 333.9062726247705, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 334.08871214676634, Y: 133.69588223945937, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 444.64763720288806, Y: 109.67310038632513, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 378.9249207905318, Y: 263.5886005709568, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '95', X: 387.24654363904256, Y: 339.7641370010396, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'XBP1, -49.2 ± 1.2
 kcal/mol, AUC: 0.736', X: 153.19902805469172, Y: 352.5641370010396, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 462.64763720288806, 352.5641370010396)
Updated viewBox: -0.25 -5.0 467.89763720288806 362.5641370010396
Updated SVG: /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_11.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/12682de1-e404-4354-b5ca-3b4dfe3cdfe6/final_image/XBP1_fold_final_11.svg
