Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
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Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_3.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 158.86 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 158.86 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 158.86 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.50 MB
Based on canonical annotations, the following gene is in your area of interest: HCFC1(-)
write fasta - Elapsed time since the previous call: 0.52 seconds
write fasta - Current memory usage: 172.50 MB
Length of region: 91 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.19 seconds
write dat - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fasta/HCFC1.fasta" "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" --SHAPE "HCFC1.dat"

fold - Elapsed time since the previous call: 0.12 seconds
fold - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_FE/HCFC1.txt" -sh "HCFC1.dat"

efn2 - Elapsed time since the previous call: 0.62 seconds
efn2 - Current memory usage: 176.09 MB
This region has 13 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 1 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 2 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 3 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 4 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 5 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 6 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.03 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 7 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 8 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 9 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp9.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 10 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp10.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 11 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp11.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 12 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp12.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/ct/HCFC1.ct" 13 "/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/fold_dbn/HCFC1_temp13.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.09 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '.((((......))).).((((.......((((.............))))))))..(((.(((((....((((....))))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_3.svg', '-title', 'HCFC1, -35.5 ± 2.0\n kcal/mol, AUC: 0.795', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
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Text: 'G', X: 9.406573293087632, Y: 173.5584952639304, Width: 10.5, Height: 8
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Text: 'U', X: 4.75, Y: 156.68942661787958, Width: 10.5, Height: 8
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Text: 'C', X: 99.31826154151193, Y: 165.82155663410748, Width: 10.5, Height: 8
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Text: 'A', X: 92.82917545546997, Y: 150.25585974828095, Width: 10.5, Height: 8
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Text: 'G', X: 94.12935056143212, Y: 133.4419160565907, Width: 10.5, Height: 8
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Text: 'A', X: 230.06908664995126, Y: 113.57900726012926, Width: 10.5, Height: 8
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Text: 'C', X: 261.5911014750086, Y: 100.01108319153886, Width: 10.5, Height: 8
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Text: 'C', X: 303.1865939157562, Y: 127.39226905202932, Width: 10.5, Height: 8
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Text: 'U', X: 306.6242828119528, Y: 144.5512753035738, Width: 10.5, Height: 8
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Text: 'C', X: 303.1865939157562, Y: 161.71028155511823, Width: 10.5, Height: 8
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Text: 'C', X: 293.40414860361756, Y: 176.2207248358244, Width: 10.5, Height: 8
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Text: 'A', X: 278.786907419764, Y: 185.84285872912648, Width: 10.5, Height: 8
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Text: 'C', X: 186.79701799102597, Y: 70.29249098298172, Width: 10.5, Height: 8
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Text: 'C', X: 186.7970186857517, Y: 52.79248675433658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_12.svg


Text: 'A', X: 197.17670335339088, Y: 38.703047652549316, Width: 10.5, Height: 8
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Text: 'C', X: 213.89029168261735, Y: 33.51593736224871, Width: 10.5, Height: 8
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Text: 'A', X: 230.4231824346465, Y: 39.25298114664369, Width: 10.5, Height: 8
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Text: 'G', X: 249.52442185925145, Y: 33.324857291331824, Width: 10.5, Height: 8
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Text: 'C', X: 268.6256612838564, Y: 27.3967334360199, Width: 10.5, Height: 8
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Text: 'A', X: 287.72690070846136, Y: 21.46860958070809, Width: 10.5, Height: 8
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Text: 'C', X: 303.0414004837112, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 319.27763303567895, Y: 19.52962511289971, Width: 10.5, Height: 8
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Text: 'C', X: 259.15762312413324, Y: 64.36437135631482, Width: 10.5, Height: 8
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Text: 'U', X: 240.05638369952828, Y: 70.29249521162674, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 104.38193090888697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 124.38193090888697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 144.381930908887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 229.67670154000297, Y: 164.381930908887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 229.67670154000297, Y: 196.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 216.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 247.17670154000297, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.67670154000297, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 27.926701540002966, Y: 256.7330037690525, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 52.525500843312344, Y: 121.46830938654594, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 88.42670154000297, Y: 196.73300376905252, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 176.85843000548167, Y: 108.30127530357376, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 317.89305291343277, Y: 169.41476864168555, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 160.92670154000297, Y: 176.73300376905252, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 173.42670154000297, Y: 164.381930908887, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 239.84629800393958, Y: 14.22361786672684, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 255.30696523558072, Y: 76.53572364664521, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 243.42670154000297, Y: 256.7330037690525, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '91', X: 260.92670154000297, Y: 256.7330037690525, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -35.5 ± 2.0
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Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_3.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_3.svg
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 81.77252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 99.27252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 95.45692546838157, Y: 495.20051294218837, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 86.94543362281237, Y: 477.1020459749889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'U', X: 59.34582716905655, Y: 432.2360373941712, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 66.65588435185768, Y: 416.3359677149764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 82.49202101846413, Y: 408.88842266337485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 99.40080221528189, Y: 413.39866326196983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 109.42394219066105, Y: 427.74389999243294, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 107.84395059894229, Y: 445.17240475873956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 116.35544244451148, Y: 463.270871725939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 124.86693429008065, Y: 481.36933869313845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.58816320130308, Y: 495.2006528256845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 131.77252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 149.27252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 166.77252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 166.77252870905951, Y: 492.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 166.77252870905951, Y: 472.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 166.77252870905951, Y: 452.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 166.77252870905951, Y: 432.27961454534415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 162.95692546838154, Y: 415.20051294218837, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 154.44543362281237, Y: 397.1020459749889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 145.9339417772432, Y: 379.0035790077895, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 137.422449931674, Y: 360.90511204059004, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 121.36477665949022, Y: 356.6235553100336, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 108.93368346115909, Y: 345.59411648262335, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 102.7706704503886, Y: 330.16045620444396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 104.18532474948583, Y: 313.60209420310986, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 90.04318912575488, Y: 299.4599585793789, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 75.90105350202393, Y: 285.31782295564796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 61.12630442313957, Y: 275.93917382673146, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.927224696705366, Y: 258.5778283090561, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 52.1483407498977, Y: 239.76169872734573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 40.382689662487365, Y: 226.8072842346508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 41.183098294938134, Y: 209.3256725703813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 34.40414840320881, Y: 190.5095667467678, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 22.63845191448334, Y: 177.55519348927595, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 23.43879927905607, Y: 160.07357901991855, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 16.65978344248839, Y: 141.25749695463293, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 7.424648117506365, Y: 127.43624535439193, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 11.428377151489315, Y: 111.3028987055921, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 11.428377151489315, Y: 91.3028987055921, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 75.12736227550926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 11.428377151489258, Y: 58.95182584542653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 11.428377151489258, Y: 38.95182584542653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 12.3685782900464, Y: 21.477077958505106, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 27.678377151489258, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 42.988176012932115, Y: 21.477077958505106, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 43.92837715148926, Y: 38.95182584542653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 43.92837715148926, Y: 58.95182584542653, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 50.606754302978516, Y: 75.12736227550926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 43.928377151489286, Y: 91.3028987055921, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 43.928377151489286, Y: 111.3028987055921, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 47.235916798577534, Y: 130.2415962202104, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.01493263514524, Y: 149.05767828549602, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 65.78070176216892, Y: 162.01208590798404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 64.98032036658077, Y: 179.49377317270768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 71.7592702583101, Y: 198.30987899632117, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 83.52499398389821, Y: 211.26432785426692, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 82.72455132017694, Y: 228.7460123137833, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.50343526698461, Y: 247.56214189549365, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 98.88202389058671, Y: 262.33685256708515, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 113.02415951431766, Y: 276.4789881908161, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 127.16629513804864, Y: 290.62112381454705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 145.33378717371897, Y: 289.482675715982, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 161.74165959217424, Y: 297.3652865549721, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 172.20686860695287, Y: 312.25935353535954, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.06140057028585, Y: 330.36776434736197, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 166.83245875337312, Y: 347.0739377915401, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 175.34395059894229, Y: 365.17240475873956, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 183.85544244451148, Y: 383.270871725939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.36693429008065, Y: 401.36933869313845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 203.08816320130308, Y: 415.2006528256845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 199.27252870905951, Y: 432.27961454534415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 199.27252870905951, Y: 452.2796145453442, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_13.svg


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Text: 'C', X: 199.27252870905951, Y: 492.2796145453442, Width: 10.5, Height: 8
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Text: 'U', X: 199.27252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 216.77252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.27252870905951, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 251.77252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 269.27252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
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Text: 'U', X: 286.77252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 304.27252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 321.77252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
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Text: 'C', X: 339.27252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 356.77252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
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Text: 'A', X: 374.27252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 391.77252870905954, Y: 512.2796145453442, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 82.52252870905951, Y: 532.2796145453442, Width: 9.0, Height: 8
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Text: '10', X: 107.1213280123689, Y: 397.01492016283765, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 143.02252870905951, Y: 472.2796145453442, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 82.57122246557034, Y: 322.5950831161357, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 0.8727112741666581, Y: 166.8525783702841, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 56.189297370107624, Y: 10.862960720867932, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 86.82538202146904, Y: 191.53094559081325, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 190.07726874044906, Y: 333.41906824565353, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 209.66466433279047, Y: 526.4217501690752, Width: 18.0, Height: 8
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Text: '90', X: 370.52252870905954, Y: 532.2796145453442, Width: 18.0, Height: 8
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Text: '91', X: 388.02252870905954, Y: 532.2796145453442, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -35.5 ± 1.1
 kcal/mol, AUC: 0.638', X: 132.26126435452977, Y: 545.0796145453442, Width: 142.5, Height: 23
Calculated bounding box: (0.8727112741666581, 2.8629607208679317, 406.02252870905954, 545.0796145453442)
Updated viewBox: -4.127288725833342 -2.1370392791320683 415.1498174348929 552.2166538244762
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_12.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_12.svg
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Text: 'C', X: 208.28226213897528, Y: 139.56309618812253, Width: 10.5, Height: 8
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Text: 'G', X: 191.1211558149754, Y: 142.99002339709529, Width: 10.5, Height: 8
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Text: 'U', X: 139.756758333858, Y: 132.8744370349458, Width: 10.5, Height: 8
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Text: 'C', X: 125.17650574914046, Y: 123.19643957033244, Width: 10.5, Height: 8
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Text: 'C', X: 105.55340770376847, Y: 119.33198319178203, Width: 10.5, Height: 8
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Text: 'A', X: 88.05896742979678, Y: 119.77563770574332, Width: 10.5, Height: 8
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Text: 'C', X: 76.55991819573603, Y: 106.58381688600923, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 60.44721565228099, Y: 94.73557580363183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 43.45931654615117, Y: 90.53335206861021, Width: 10.5, Height: 8
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Text: 'G', X: 34.38406725250991, Y: 75.57048968812006, Width: 10.5, Height: 8
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Text: 'C', X: 18.271323184576772, Y: 63.7223050760673, Width: 10.5, Height: 8
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Text: 'C', X: 4.75, Y: 52.6126421095035, Width: 10.5, Height: 8
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Text: 'U', X: 6.990216784722975, Y: 35.25659933904876, Width: 10.5, Height: 8
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Text: 'U', X: 22.88933232837701, Y: 27.94435503090716, Width: 10.5, Height: 8
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Text: 'G', X: 37.52462317916252, Y: 37.53909596567581, Width: 10.5, Height: 8
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Text: 'C', X: 70.62534581939974, Y: 53.58949237949895, Width: 10.5, Height: 8
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Text: 'G', X: 79.70060741114446, Y: 68.55243417051736, Width: 10.5, Height: 8
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Text: 'G', X: 95.8133099545995, Y: 80.40067525289481, Width: 10.5, Height: 8
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Text: 'G', X: 111.83314931891289, Y: 87.44444886805258, Width: 10.5, Height: 8
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Text: 'G', X: 131.45624736428488, Y: 91.30890524660299, Width: 10.5, Height: 8
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Text: 'C', X: 148.6174085099674, Y: 87.88187327536048, Width: 10.5, Height: 8
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Text: 'G', X: 163.19770601886, Y: 97.55993736649879, Width: 10.5, Height: 8
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Text: 'G', X: 182.8207905203359, Y: 101.42446251817432, Width: 10.5, Height: 8
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Text: 'G', X: 199.98196367664548, Y: 97.99749069174175, Width: 10.5, Height: 8
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Text: 'G', X: 214.5622272666992, Y: 107.67560588244663, Width: 10.5, Height: 8
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Text: 'G', X: 234.1852982240382, Y: 111.54019980719983, Width: 10.5, Height: 8
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Text: 'G', X: 251.67967600305627, Y: 111.09663907291599, Width: 10.5, Height: 8
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Text: 'C', X: 271.08169022411596, Y: 106.24258466800899, Width: 10.5, Height: 8
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Text: 'C', X: 290.48370444517565, Y: 101.38853026310198, Width: 10.5, Height: 8
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Text: 'C', X: 357.8288697819163, Y: 93.09207377694406, Width: 10.5, Height: 8
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Text: 'A', X: 377.8288697819163, Y: 93.09207377694406, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 397.8288697819163, Y: 93.09207377694406, Width: 10.5, Height: 8
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Text: 'U', X: 417.8288697819163, Y: 93.09207377694406, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Text: 'U', X: 521.1083168216538, Y: 109.60329167417228, Width: 10.5, Height: 8
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Text: 'U', X: 537.8218982293657, Y: 114.790410000159, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 548.2015747955809, Y: 128.87984981800713, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 548.201571321953, Y: 146.3798498180068, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 537.8218891624276, Y: 160.46928551526702, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 537.8218891624276, Y: 180.46928551526702, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 537.8218891624276, Y: 200.46928551526702, Width: 10.5, Height: 8
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Text: 'G', X: 537.8218891624276, Y: 220.46928551526702, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_5.svg


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Text: 'C', X: 572.8218891624276, Y: 220.46928551526705, Width: 10.5, Height: 8
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Text: 'A', X: 590.3218891624276, Y: 220.46928551526705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 607.8218891624276, Y: 220.46928551526705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 421.0718891624276, Y: 240.46928551526702, Width: 9.0, Height: 8
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Text: '10', X: 507.30603554019217, Y: 138.17882821454177, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 466.1628263166556, Y: 159.5529243714525, Width: 18.0, Height: 8
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Text: '30', X: 293.39644800696783, Y: 152.87924667513283, Width: 18.0, Height: 8
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Text: '40', X: 117.56203217730453, Y: 142.81953422975306, Width: 18.0, Height: 8
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Text: '50', X: 20.63020536157896, Y: 8.0, Width: 18.0, Height: 8
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Text: '60', X: 182.93533286528546, Y: 81.80138140271004, Width: 18.0, Height: 8
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Text: '91', X: 604.0718891624276, Y: 240.46928551526705, Width: 18.0, Height: 8
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Text: 'HCFC1, -35.1 ± 1.7
 kcal/mol, AUC: 0.635', X: 240.2859445812138, Y: 253.26928551526706, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 622.0718891624276, 253.26928551526706)
Updated viewBox: -0.25 -5.0 627.3218891624276 263.26928551526703
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_13.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_13.svg
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Text: 'A', X: 127.59404164780753, Y: 404.8471722699032, Width: 10.5, Height: 8
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Text: 'G', X: 157.93900477429338, Y: 295.7621000766863, Width: 10.5, Height: 8
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Text: 'C', X: 152.06065545182636, Y: 224.7592095241879, Width: 10.5, Height: 8
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Text: 'C', X: 157.20074515119148, Y: 205.43100531680017, Width: 10.5, Height: 8
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Text: 'G', X: 154.90386836655034, Y: 188.08246770132945, Width: 10.5, Height: 8
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Text: 'U', X: 165.51504654683927, Y: 174.16663865720187, Width: 10.5, Height: 8
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Text: 'C', X: 170.65506850653958, Y: 154.83841643544025, Width: 10.5, Height: 8
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Text: 'U', X: 168.3581309204246, Y: 137.48988686994932, Width: 10.5, Height: 8
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Text: 'C', X: 178.96926032978763, Y: 123.5740206368693, Width: 10.5, Height: 8
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Text: 'C', X: 184.10921454976, Y: 104.24578040097123, Width: 10.5, Height: 8
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Text: 'A', X: 185.2351786120903, Y: 85.98557302895262, Width: 10.5, Height: 8
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Text: 'C', X: 200.4669235226732, Y: 75.85162437515959, Width: 10.5, Height: 8
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Text: 'C', X: 214.60905914640415, Y: 61.70948875142864, Width: 10.5, Height: 8
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Text: 'A', X: 221.32456487430636, Y: 45.54933148124775, Width: 10.5, Height: 8
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Text: 'G', X: 237.48472214448725, Y: 38.83382575334548, Width: 10.5, Height: 8
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Text: 'C', X: 251.6268577682182, Y: 24.69169012961453, Width: 10.5, Height: 8
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Text: 'C', X: 264.64819309933876, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 281.468055001973, Y: 17.831463284422398, Width: 10.5, Height: 8
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Text: 'U', X: 286.2995182863954, Y: 34.651325187056784, Width: 10.5, Height: 8
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Text: 'G', X: 274.607828156781, Y: 47.67266051817734, Width: 10.5, Height: 8
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Text: 'C', X: 260.46569253305006, Y: 61.81479614190829, Width: 10.5, Height: 8
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Text: 'C', X: 253.7501868051479, Y: 77.97495341208918, Width: 10.5, Height: 8
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Text: 'G', X: 237.59002953496696, Y: 84.69045913999145, Width: 10.5, Height: 8
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Text: 'G', X: 223.44789391123598, Y: 98.8325947637224, Width: 10.5, Height: 8
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Text: 'G', X: 215.51760493309433, Y: 112.59820600842642, Width: 10.5, Height: 8
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Text: 'G', X: 210.37765071312197, Y: 131.92644624432438, Width: 10.5, Height: 8
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Text: 'C', X: 212.6746284490729, Y: 149.2750454177604, Width: 10.5, Height: 8
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Text: 'G', X: 202.06342961690217, Y: 163.19095211995324, Width: 10.5, Height: 8
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Text: 'G', X: 196.92340765720186, Y: 182.51917434171486, Width: 10.5, Height: 8
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Text: 'G', X: 199.22032459143503, Y: 199.8677815652713, Width: 10.5, Height: 8
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Text: 'G', X: 188.60907698819653, Y: 213.78365107826852, Width: 10.5, Height: 8
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Text: 'G', X: 183.4689872888314, Y: 233.11185528565625, Width: 10.5, Height: 8
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Text: 'G', X: 182.7670856606195, Y: 250.59777345154941, Width: 10.5, Height: 8
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Text: 'C', X: 186.34142828547712, Y: 270.27578338142104, Width: 10.5, Height: 8
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Text: 'C', X: 189.91577091033474, Y: 289.95379331129266, Width: 10.5, Height: 8
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Text: 'A', X: 205.75188411005132, Y: 297.40144520472614, Width: 10.5, Height: 8
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Text: 'C', X: 217.06956272635648, Y: 310.749109822105, Width: 10.5, Height: 8
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Text: 'A', X: 221.827877256473, Y: 327.5897880398159, Width: 10.5, Height: 8
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Text: 'G', X: 240.6567168826159, Y: 334.33328849084205, Width: 10.5, Height: 8
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Text: 'C', X: 259.48555650875886, Y: 341.0767889418682, Width: 10.5, Height: 8
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Text: 'A', X: 278.3143961349018, Y: 347.8202893928943, Width: 10.5, Height: 8
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Text: 'C', X: 295.6439091523651, Y: 350.2573429774834, Width: 10.5, Height: 8
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Text: 'U', X: 304.6950430424856, Y: 365.2349338017682, Width: 10.5, Height: 8
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Text: 'A', X: 298.79446809050415, Y: 381.7102021404823, Width: 10.5, Height: 8
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Text: 'G', X: 282.29263172535576, Y: 387.53606243527605, Width: 10.5, Height: 8
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Text: 'U', X: 267.35620790198436, Y: 378.4171537853766, Width: 10.5, Height: 8
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Text: 'G', X: 248.5273682758414, Y: 371.6736533343505, Width: 10.5, Height: 8
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Text: 'C', X: 229.69852864969846, Y: 364.93015288332435, Width: 10.5, Height: 8
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Text: 'U', X: 210.86968902355554, Y: 358.1866524322982, Width: 10.5, Height: 8
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Text: 'U', X: 196.50179419483214, Y: 368.17732799457843, Width: 10.5, Height: 8
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Text: 'C', X: 179.2835437281549, Y: 371.3049230557666, Width: 10.5, Height: 8
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Text: 'C', X: 178.44298812609793, Y: 388.7847247216852, Width: 10.5, Height: 8
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Text: 'C', X: 165.5155720627421, Y: 400.5801439141044, Width: 10.5, Height: 8
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Text: 'U', X: 157.00395404749432, Y: 418.6785515446809, Width: 10.5, Height: 8
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Text: 'G', X: 148.49233603224653, Y: 436.77695917525733, Width: 10.5, Height: 8
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Text: 'G', X: 144.67670154000297, Y: 453.85592089491706, Width: 10.5, Height: 8
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Text: 'C', X: 144.67670154000297, Y: 473.85592089491706, Width: 10.5, Height: 8
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Text: 'C', X: 144.67670154000297, Y: 493.85592089491706, Width: 10.5, Height: 8
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Text: 'A', X: 162.17670154000297, Y: 493.85592089491706, Width: 10.5, Height: 8
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Text: 'C', X: 179.67670154000297, Y: 493.85592089491706, Width: 10.5, Height: 8
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Text: '1', X: 27.926701540002966, Y: 513.8559208949171, Width: 9.0, Height: 8
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Text: '10', X: 52.525500843312386, Y: 378.5912265124105, Width: 18.0, Height: 8
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Text: '20', X: 88.5473621661966, Y: 451.66232429092804, Width: 18.0, Height: 8
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Text: '30', X: 134.54550819051846, Y: 292.00270624746025, Width: 18.0, Height: 8
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Text: '40', X: 155.8910245974015, Y: 118.43404948195888, Width: 18.0, Height: 8
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Text: '50', X: 302.0410854218127, Y: 39.132263772389365, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_8.svg


Text: '60', X: 212.5016253753922, Y: 187.65921323633745, Width: 18.0, Height: 8
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Text: '70', X: 243.65021733364205, Y: 315.5044488646991, Width: 18.0, Height: 8
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Text: '80', X: 207.6168995249291, Y: 378.18047101998485, Width: 18.0, Height: 8
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Text: '90', X: 158.42670154000297, Y: 513.8559208949171, Width: 18.0, Height: 8
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Text: '91', X: 175.92670154000297, Y: 513.8559208949171, Width: 18.0, Height: 8
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Text: 'HCFC1, -33.9 ± 1.3
 kcal/mol, AUC: 0.744', X: 88.72252152124281, Y: 526.655920894917, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 320.0410854218127, 526.655920894917)
Updated viewBox: -0.25 0.0 325.2910854218127 531.655920894917
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_5.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_5.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '.....(((((..((...))....))))).((((..((........))..))))..(((.(((((....((((....))))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_8.svg', '-title', 'HCFC1, -34.9 ± 1.6\n kcal/mol, AUC: 0.734', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
Warning: Font Verdana not found. Using default font.
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Text: 'A', X: 22.25, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 57.25, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'U', X: 74.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 92.25, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'U', X: 92.25, Y: 216.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 92.25, Y: 196.73300376905252, Width: 10.5, Height: 8
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Text: 'A', X: 92.25, Y: 176.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 79.74021008847481, Y: 144.49553888523383, Width: 10.5, Height: 8
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Text: 'A', X: 75.14890766144111, Y: 127.60855181125558, Width: 10.5, Height: 8
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Text: 'C', X: 79.74022472117798, Y: 110.72156871568276, Width: 10.5, Height: 8
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Text: 'C', X: 69.61344386928292, Y: 93.47487890059963, Width: 10.5, Height: 8
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Text: 'C', X: 61.57606462465857, Y: 77.92974053613048, Width: 10.5, Height: 8
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Text: 'U', X: 70.4859566918789, Y: 62.86771493387849, Width: 10.5, Height: 8
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Text: 'A', X: 87.98039983412033, Y: 62.42584274048798, Width: 10.5, Height: 8
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Text: 'G', X: 97.63931481879297, Y: 77.01886001627017, Width: 10.5, Height: 8
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Text: 'G', X: 107.76609567068803, Y: 94.2655498313533, Width: 10.5, Height: 8
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Text: 'C', X: 124.75001514192803, Y: 98.48413720089249, Width: 10.5, Height: 8
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Text: 'A', X: 137.25979283806322, Y: 110.72159862037316, Width: 10.5, Height: 8
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Text: 'C', X: 141.85109233856087, Y: 127.60857493043912, Width: 10.5, Height: 8
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Text: 'A', X: 137.2597840584465, Y: 144.49554885346492, Width: 10.5, Height: 8
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Text: 'U', X: 124.75, Y: 176.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 124.75, Y: 196.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 124.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 159.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 159.75, Y: 216.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 159.75, Y: 196.73300376905252, Width: 10.5, Height: 8
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Text: 'A', X: 159.75, Y: 176.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 149.37031668259823, Y: 162.64356454792141, Width: 10.5, Height: 8
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Text: 'C', X: 149.37031668259823, Y: 145.14356102405048, Width: 10.5, Height: 8
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Text: 'G', X: 159.75, Y: 131.0541218029194, Width: 10.5, Height: 8
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Text: 'U', X: 159.75, Y: 111.05412180291941, Width: 10.5, Height: 8
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Text: 'C', X: 148.0949319257163, Y: 98.0000076147393, Width: 10.5, Height: 8
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Text: 'U', X: 145.4117893094517, Y: 80.70690914294951, Width: 10.5, Height: 8
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Text: 'C', X: 152.56324539329538, Y: 64.73483398237354, Width: 10.5, Height: 8
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Text: 'C', X: 167.24999272779968, Y: 55.219059616266264, Width: 10.5, Height: 8
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Text: 'A', X: 184.7500072722003, Y: 55.219059616266264, Width: 10.5, Height: 8
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Text: 'C', X: 199.43675460670462, Y: 64.73483398237354, Width: 10.5, Height: 8
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Text: 'C', X: 206.5882106905483, Y: 80.70690914294951, Width: 10.5, Height: 8
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Text: 'A', X: 203.90506807428372, Y: 98.0000076147393, Width: 10.5, Height: 8
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Text: 'G', X: 192.25, Y: 111.05412180291941, Width: 10.5, Height: 8
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Text: 'C', X: 192.25, Y: 131.0541218029194, Width: 10.5, Height: 8
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Text: 'C', X: 202.62968331740177, Y: 145.14356102405048, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

Warning: Font Verdana not found. Using default font.
Text: 'U', X: 202.62968331740177, Y: 162.64356454792141, Width: 10.5, Height: 8
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Text: 'U', X: 192.25, Y: 176.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 192.25, Y: 196.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 192.25, Y: 216.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 192.25, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 209.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 236.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 216.73300376905252, Width: 10.5, Height: 8
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Text: 'C', X: 244.75, Y: 196.73300376905252, Width: 10.5, Height: 8
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Text: 'G', X: 238.07162284851074, Y: 180.55746733896973, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 164.381930908887, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 144.381930908887, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 124.38193090888697, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 104.38193090888697, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 84.38193090888697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.370316451023, Y: 70.29249098298172, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.37031714574874, Y: 52.79248675433658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 244.75000181338794, Y: 38.703047652549316, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 261.46359014261435, Y: 33.51593736224871, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 277.9964808946435, Y: 39.25298114664369, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.0977203192485, Y: 33.324857291331824, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 316.19895974385344, Y: 27.3967334360199, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 335.3001991684584, Y: 21.46860958070809, Width: 10.5, Height: 8
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Text: 'C', X: 350.6146989437082, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 366.850931495676, Y: 19.52962511289971, Width: 10.5, Height: 8
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Text: 'A', X: 372.0380504685196, Y: 36.24324376231712, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.3516339063058, Y: 50.8180365834813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 344.9334004333402, Y: 52.508123645691086, Width: 10.5, Height: 8
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Text: 'G', X: 325.8321610087352, Y: 58.43624750100301, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 306.7309215841303, Y: 64.36437135631482, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 287.6296821595253, Y: 70.29249521162674, Width: 10.5, Height: 8
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Text: 'U', X: 277.25, Y: 84.38193090888697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 104.38193090888697, Width: 10.5, Height: 8
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Text: 'C', X: 277.25, Y: 124.38193090888697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 144.381930908887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 277.25, Y: 164.381930908887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 283.92837715148926, Y: 180.55746733896973, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 196.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 216.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 294.75, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 312.25, Y: 236.73300376905252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 256.7330037690525, Width: 9.0, Height: 8
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Text: '10', X: 69.20059963946693, Y: 161.98020737896283, Width: 18.0, Height: 8
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Text: '20', X: 130.74483247922348, Y: 81.01878478352782, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 141.85786437626905, Y: 250.87513939278347, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 133.62560365543737, Y: 51.72193505698135, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 208.2485651028652, Y: 179.89436049961847, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 221.0, Y: 164.381930908887, Width: 18.0, Height: 8
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Text: '70', X: 287.4195964639366, Y: 14.22361786672684, Width: 18.0, Height: 8
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Text: '80', X: 302.88026369557775, Y: 76.53572364664521, Width: 18.0, Height: 8
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Text: '90', X: 291.0, Y: 256.7330037690525, Width: 18.0, Height: 8
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Text: '91', X: 308.5, Y: 256.7330037690525, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -34.9 ± 1.6
 kcal/mol, AUC: 0.734', X: 122.3940252342598, Y: 269.5330037690525, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 382.5380504685196, 269.5330037690525)
Updated viewBox: -0.25 0.0 387.7880504685196 274.5330037690525
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_8.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '.((((......))).).((((..((...((((...))))......))..))))..(((.(((((....((((....))))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_1.svg', '-title', 'HCFC1, -34.9 ± 1.7\n kcal/mol, AUC: 0.807', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_1.svg


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Text: 'A', X: 44.676701540002966, Y: 269.47267912522636, Width: 10.5, Height: 8
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Text: 'G', X: 40.86109829932502, Y: 252.39357752207056, Width: 10.5, Height: 8
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Text: 'G', X: 32.349606453755825, Y: 234.29511055487112, Width: 10.5, Height: 8
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Text: 'U', X: 23.838114608186658, Y: 216.19664358767167, Width: 10.5, Height: 8
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Text: 'G', X: 9.406573293087632, Y: 206.2981706201043, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 4.75, Y: 189.42910197405345, Width: 10.5, Height: 8
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Text: 'C', X: 12.060057182801131, Y: 173.5290322948586, Width: 10.5, Height: 8
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Text: 'A', X: 27.89619384940758, Y: 166.08148724325707, Width: 10.5, Height: 8
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Text: 'C', X: 44.80497504622534, Y: 170.59172784185202, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.8281150216045, Y: 184.9369645723152, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 53.24812342988574, Y: 202.36546933862175, Width: 10.5, Height: 8
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Text: 'C', X: 61.75961527545492, Y: 220.4639363058212, Width: 10.5, Height: 8
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Text: 'C', X: 70.2711071210241, Y: 238.56240327302064, Width: 10.5, Height: 8
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Text: 'C', X: 80.99233603224654, Y: 252.3937174055667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 77.17670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 94.67670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.17670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.17670154000297, Y: 249.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 112.17670154000297, Y: 229.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 112.17670154000297, Y: 209.4726791252264, Width: 10.5, Height: 8
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Text: 'C', X: 101.7970182226012, Y: 195.3832399040953, Width: 10.5, Height: 8
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Text: 'A', X: 101.7970182226012, Y: 177.88323638022436, Width: 10.5, Height: 8
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Text: 'G', X: 112.17670154000297, Y: 163.7937971590933, Width: 10.5, Height: 8
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Text: 'U', X: 112.17670154000297, Y: 143.7937971590933, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 98.94158434946813, Y: 134.81115442875804, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 90.08706661506605, Y: 121.48997906172704, Width: 10.5, Height: 8
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Text: 'C', X: 86.92866271379546, Y: 105.80939609219192, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.93561624142524, Y: 90.09906738937005, Width: 10.5, Height: 8
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Text: 'G', X: 75.79348061769427, Y: 75.9569317656391, Width: 10.5, Height: 8
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Text: 'G', X: 61.65134499396332, Y: 61.81479614190815, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 47.509209370232384, Y: 47.672660518177224, Width: 10.5, Height: 8
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Text: 'A', X: 35.817519240618, Y: 34.65132518705673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.64898252504037, Y: 17.831463284422398, Width: 10.5, Height: 8
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Text: 'C', X: 57.46884442767467, Y: 13.0, Width: 10.5, Height: 8
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Text: 'G', X: 70.49017975879518, Y: 24.69169012961447, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 84.63231538252613, Y: 38.833825753345366, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 98.77445100625708, Y: 52.975961377076345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 112.91658662998805, Y: 67.11809700080724, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 131.03905553942238, Y: 64.19296665181557, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 148.6503475213908, Y: 69.37202657209659, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 162.30434228513315, Y: 81.64185517414737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 169.329270578658, Y: 98.60153233507353, Width: 10.5, Height: 8
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Text: 'C', X: 168.35051729943694, Y: 116.93244363130813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 159.559601703333, Y: 133.04765600701646, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.67670154000297, Y: 143.7937971590933, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.67670154000297, Y: 163.7937971590933, Width: 10.5, Height: 8
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Text: 'C', X: 155.05638485740474, Y: 177.88323638022436, Width: 10.5, Height: 8
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Text: 'U', X: 155.05638485740474, Y: 195.3832399040953, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 144.67670154000297, Y: 209.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.67670154000297, Y: 229.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.67670154000297, Y: 249.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.67670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 162.17670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 179.67670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 249.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 197.17670154000297, Y: 229.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 190.4983243885137, Y: 213.29714269514363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 197.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 177.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 157.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_11.svg


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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 197.17670154000297, Y: 117.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 186.79701799102597, Y: 103.03216633915562, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 186.7970186857517, Y: 85.53216211051048, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 197.17670335339088, Y: 71.44272300872322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 213.89029168261735, Y: 66.25561271842261, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 230.4231824346465, Y: 71.9926565028176, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 249.52442185925145, Y: 66.06453264750573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 268.6256612838564, Y: 60.136408792193805, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 287.72690070846136, Y: 54.208284936881995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 303.0414004837112, Y: 45.739675356173905, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 319.27763303567895, Y: 52.26930046907361, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 324.46475200852257, Y: 68.98291911849103, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 314.77833544630874, Y: 83.5577119396552, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 297.36010197334315, Y: 85.24779900186499, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 278.2588625487382, Y: 91.17592285717691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.15762312413324, Y: 97.10404671248872, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 240.05638369952828, Y: 103.03217056780065, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 229.67670154000297, Y: 117.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 137.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 157.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 177.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 229.67670154000297, Y: 197.12160626506088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 229.67670154000297, Y: 229.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 249.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.67670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 247.17670154000297, Y: 269.47267912522636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.67670154000297, Y: 269.4726791252264, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 27.926701540002966, Y: 289.47267912522636, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: '20', X: 88.42670154000297, Y: 229.4726791252264, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 57.90134499396332, Y: 90.09906738937005, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 128.54806616717764, Y: 44.23263368266902, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 160.6752666428681, Y: 212.63403585579263, Width: 18.0, Height: 8
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Text: '91', X: 260.92670154000297, Y: 289.4726791252264, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -34.9 ± 1.7
 kcal/mol, AUC: 0.807', X: 98.60737600426128, Y: 302.27267912522643, Width: 142.5, Height: 23
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Updated viewBox: -0.25 0.0 340.21475200852257 307.27267912522643
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_1.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_1.svg
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 25.45440617077446, Y: 301.67080289816545, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Text: 'G', X: 119.76927709770484, Y: 175.02252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 139.76927709770484, Y: 175.02252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 159.76927709770484, Y: 175.02252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 179.76927709770484, Y: 175.02252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 196.84837870086068, Y: 171.2069254683817, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.94684566806012, Y: 162.69543362281257, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 233.04531263525956, Y: 154.18394177724338, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 251.143779602459, Y: 145.67244993167418, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 255.42533633301537, Y: 129.61477665949042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 266.45477516042564, Y: 117.18368346115932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 281.88843543860503, Y: 111.02067045038876, Width: 10.5, Height: 8
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Text: 'G', X: 298.4467974399391, Y: 112.43532474948603, Width: 10.5, Height: 8
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Text: 'G', X: 312.58893306367, Y: 98.29318912575508, Width: 10.5, Height: 8
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Text: 'C', X: 326.731068687401, Y: 84.15105350202413, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 336.10971781631747, Y: 69.3763044231398, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 353.47106333399284, Y: 67.1772246967056, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 372.28719291570314, Y: 60.39834074989784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 385.2416074083981, Y: 48.63268966248751, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 402.7232190726676, Y: 49.43309829493825, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 421.5393248962811, Y: 42.654148403208865, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 434.49369815377287, Y: 30.88845191448337, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 451.97531262313026, Y: 31.68879927905607, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 470.7913946884159, Y: 24.909783442488333, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 484.612646288657, Y: 15.674648117506365, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 500.7459929374568, Y: 19.678377151489258, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 520.7459929374568, Y: 19.678377151489258, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 536.9215293675395, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 553.0970657976222, Y: 19.678377151489258, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 573.0970657976222, Y: 19.678377151489258, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 590.5718136845437, Y: 20.6185782900464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 599.0488916430488, Y: 35.92837715148926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 590.5718136845437, Y: 51.238176012932115, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 573.0970657976222, Y: 52.17837715148926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 553.0970657976222, Y: 52.17837715148926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 536.9215293675395, Y: 58.856754302978516, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 520.7459929374568, Y: 52.17837715148926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 500.7459929374568, Y: 52.17837715148926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 481.80729542283854, Y: 55.48591679857748, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 462.99121335755285, Y: 62.264932635145215, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 450.0368057350648, Y: 74.03070176216892, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 432.5551184703413, Y: 73.23032036658083, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 413.7390126467278, Y: 80.00927025831021, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 400.784563788782, Y: 91.77499398389836, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 383.3028793292657, Y: 90.97455132017711, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 364.48674974755534, Y: 97.75343526698481, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.7120390759638, Y: 107.13202389058694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 335.56990345223284, Y: 121.27415951431789, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.4277678285019, Y: 135.41629513804884, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 322.56621592706705, Y: 153.58378717371914, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 314.68360508807683, Y: 169.99165959217447, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 299.78953810768945, Y: 180.45686860695304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 281.681127295687, Y: 182.31140057028603, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.97495385150893, Y: 175.08245875337326, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 246.8764868843095, Y: 183.59395059894246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 228.77801991711004, Y: 192.10544244451165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_4.svg


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Warning: Font Verdana not found. Using default font.
Text: 'A', X: 196.84823881736452, Y: 211.3381632013032, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 179.76927709770484, Y: 207.52252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 159.76927709770484, Y: 207.52252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 139.76927709770484, Y: 207.52252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 119.76927709770484, Y: 207.52252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 99.76927709770484, Y: 207.52252870905966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 84.1528081755539, Y: 220.12971632918953, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 79.93584194546105, Y: 239.68009217760374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.78181180087475, Y: 252.56120230773735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 97.26461687296484, Y: 269.1801327348576, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 95.4092368820792, Y: 286.5814994940929, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 86.54561846936014, Y: 301.670776104776, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.25, Y: 311.7646005820735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 331.7646005820735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 72.25, Y: 351.7646005820735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.75, Y: 351.7646005820735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 107.25, Y: 351.7646005820735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 371.7646005820735, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 16.77818131215472, Y: 223.34236771401146, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 136.01927709770484, Y: 155.02252870905966, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 285.703808526913, Y: 94.57122246557066, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 441.44631327276386, Y: 12.872711274166932, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 597.435930922181, Y: 68.18929737010762, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 416.7679460522347, Y: 98.82538202146952, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 274.87982339739546, Y: 202.07726874044923, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 112.98213057520803, Y: 218.11788627267015, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 86.0, Y: 371.7646005820735, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '91', X: 103.5, Y: 371.7646005820735, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -34.5 ± 1.4
 kcal/mol, AUC: 0.652', X: 235.8994458215244, Y: 384.5646005820735, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 4.872711274166932, 615.435930922181, 384.5646005820735)
Updated viewBox: -0.25 -0.12728872583306838 620.685930922181 389.6918893079066
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_11.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_11.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '...(((((.........))))).......((((..((........))..))))..(((.(((((....((((....))))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_4.svg', '-title', 'HCFC1, -34.4 ± 1.6\n kcal/mol, AUC: 0.784', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 57.25, Y: 156.73300376905243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 44.67225050021045, Y: 144.56543648496594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 39.92539153751602, Y: 127.72154126798853, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 44.298879749250176, Y: 110.77686431756982, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 56.6046824916709, Y: 98.334328605069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 73.5, Y: 93.77387661157368, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.3953175083291, Y: 98.334328605069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 102.70112025074984, Y: 110.77686431756982, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 107.07460846248398, Y: 127.72154126798856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Text: 'G', X: 229.75, Y: 216.73300376905243, Width: 10.5, Height: 8
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Text: 'C', X: 229.75, Y: 196.73300376905243, Width: 10.5, Height: 8
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Text: 'A', X: 229.75, Y: 176.73300376905243, Width: 10.5, Height: 8
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Text: 'C', X: 218.0949319257163, Y: 98.00000761473922, Width: 10.5, Height: 8
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Text: 'C', X: 222.56324539329538, Y: 64.73483398237349, Width: 10.5, Height: 8
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Text: 'C', X: 237.24999272779968, Y: 55.21905961626621, Width: 10.5, Height: 8
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Text: 'C', X: 269.43675460670465, Y: 64.73483398237349, Width: 10.5, Height: 8
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Text: 'C', X: 276.5882106905483, Y: 80.70690914294946, Width: 10.5, Height: 8
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Text: 'A', X: 273.9050680742837, Y: 98.00000761473922, Width: 10.5, Height: 8
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Text: 'C', X: 262.25, Y: 131.05412180291935, Width: 10.5, Height: 8
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Text: 'C', X: 272.62968331740177, Y: 145.1435610240504, Width: 10.5, Height: 8
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Text: 'U', X: 272.62968331740177, Y: 162.64356454792136, Width: 10.5, Height: 8
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Text: 'U', X: 262.25, Y: 176.73300376905243, Width: 10.5, Height: 8
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Text: 'G', X: 262.25, Y: 196.73300376905243, Width: 10.5, Height: 8
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Text: 'C', X: 262.25, Y: 216.73300376905243, Width: 10.5, Height: 8
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Text: 'C', X: 262.25, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 279.75, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 297.25, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 216.73300376905246, Width: 10.5, Height: 8
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Text: 'C', X: 314.75, Y: 196.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 164.38193090888694, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 144.38193090888691, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 124.38193090888691, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 104.38193090888691, Width: 10.5, Height: 8
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Text: 'G', X: 314.75, Y: 84.38193090888691, Width: 10.5, Height: 8
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Text: 'C', X: 304.370316451023, Y: 70.29249098298166, Width: 10.5, Height: 8
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Text: 'C', X: 304.37031714574874, Y: 52.79248675433652, Width: 10.5, Height: 8
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Text: 'A', X: 314.75000181338794, Y: 38.70304765254926, Width: 10.5, Height: 8
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Text: 'C', X: 331.46359014261435, Y: 33.51593736224865, Width: 10.5, Height: 8
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Text: 'A', X: 347.9964808946435, Y: 39.252981146643634, Width: 10.5, Height: 8
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Text: 'G', X: 367.0977203192485, Y: 33.32485729133177, Width: 10.5, Height: 8
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Text: 'C', X: 386.19895974385344, Y: 27.396733436019844, Width: 10.5, Height: 8
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Text: 'A', X: 405.3001991684584, Y: 21.468609580708033, Width: 10.5, Height: 8
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Text: 'C', X: 420.6146989437082, Y: 12.999999999999943, Width: 10.5, Height: 8
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Text: 'U', X: 436.850931495676, Y: 19.52962511289965, Width: 10.5, Height: 8
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Text: 'A', X: 442.0380504685196, Y: 36.243243762317064, Width: 10.5, Height: 8
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Text: 'G', X: 432.3516339063058, Y: 50.818036583481245, Width: 10.5, Height: 8
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Text: 'U', X: 414.9334004333402, Y: 52.50812364569103, Width: 10.5, Height: 8
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Text: 'G', X: 395.8321610087352, Y: 58.43624750100295, Width: 10.5, Height: 8
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Text: 'C', X: 376.7309215841303, Y: 64.36437135631476, Width: 10.5, Height: 8
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Text: 'C', X: 347.25, Y: 104.38193090888691, Width: 10.5, Height: 8
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Text: 'C', X: 347.25, Y: 124.38193090888691, Width: 10.5, Height: 8
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Text: 'C', X: 347.25, Y: 144.38193090888691, Width: 10.5, Height: 8
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Text: 'U', X: 347.25, Y: 164.38193090888691, Width: 10.5, Height: 8
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Text: 'G', X: 353.92837715148926, Y: 180.55746733896967, Width: 10.5, Height: 8
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Text: 'G', X: 347.25, Y: 196.73300376905246, Width: 10.5, Height: 8
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Text: 'C', X: 347.25, Y: 216.73300376905246, Width: 10.5, Height: 8
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Text: 'C', X: 347.25, Y: 236.73300376905246, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_2.svg


Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 382.25, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 256.7330037690524, Width: 9.0, Height: 8
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Text: '10', X: 16.176612496672945, Y: 127.94253193642447, Width: 18.0, Height: 8
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Text: '20', X: 106.0, Y: 196.73300376905243, Width: 18.0, Height: 8
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Text: '30', X: 211.85786437626905, Y: 250.8751393927834, Width: 18.0, Height: 8
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Text: '40', X: 203.62560365543737, Y: 51.721935056981295, Width: 18.0, Height: 8
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Text: '50', X: 278.24856510286514, Y: 179.89436049961876, Width: 18.0, Height: 8
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Text: '60', X: 291.0, Y: 164.38193090888694, Width: 18.0, Height: 8
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Text: '70', X: 357.4195964639366, Y: 14.223617866726784, Width: 18.0, Height: 8
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Text: '80', X: 372.88026369557775, Y: 76.53572364664515, Width: 18.0, Height: 8
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Text: '90', X: 361.0, Y: 256.73300376905246, Width: 18.0, Height: 8
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Text: '91', X: 378.5, Y: 256.73300376905246, Width: 18.0, Height: 8
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Text: 'HCFC1, -34.4 ± 1.6
 kcal/mol, AUC: 0.784', X: 157.3940252342598, Y: 269.53300376905247, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 4.999999999999943, 452.5380504685196, 269.53300376905247)
Updated viewBox: -0.25 -5.684341886080802e-14 457.7880504685196 274.5330037690525
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '..(((......)))..((((...(((..((((...)))).)))..)))).(((((((.((....))..((((....)))).)))))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_2.svg', '-title', 'HCFC1, -33.3 ± 1.1\n kcal/mol, AUC: 0.797', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
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Text: 'G', X: 30.903099908497154, Y: 205.3954566788041, Width: 10.5, Height: 8
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Text: 'C', X: 72.25, Y: 240.4945132913889, Width: 10.5, Height: 8
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Text: 'C', X: 72.25, Y: 260.4945132913889, Width: 10.5, Height: 8
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Text: 'G', X: 124.75, Y: 240.4945132913889, Width: 10.5, Height: 8
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Text: 'G', X: 124.75, Y: 220.4945132913889, Width: 10.5, Height: 8
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Text: 'C', X: 124.75, Y: 200.4945132913889, Width: 10.5, Height: 8
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Text: 'C', X: 157.25, Y: 240.4945132913889, Width: 10.5, Height: 8
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Text: 'U', X: 157.25, Y: 260.4945132913889, Width: 10.5, Height: 8
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Text: 'U', X: 174.75, Y: 260.4945132913889, Width: 10.5, Height: 8
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Text: 'C', X: 192.25, Y: 240.4945132913889, Width: 10.5, Height: 8
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Text: 'C', X: 192.25, Y: 220.4945132913889, Width: 10.5, Height: 8
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Text: 'G', X: 192.25, Y: 140.4945132913889, Width: 10.5, Height: 8
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  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_8.svg


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Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_2.svg
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Text: 'C', X: 222.83139614765082, Y: 95.57560592998303, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_6.svg


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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: '80', X: 193.47162320759873, Y: 65.44331395978298, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
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Text: '91', X: 241.0, Y: 238.28850142624603, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -32.8 ± 1.2
 kcal/mol, AUC: 0.734', X: 123.60437378600989, Y: 256.1405077288223, Width: 142.5, Height: 23
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Updated viewBox: -0.25 0.0 390.2087475720198 261.1405077288223
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_8.svg
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'A', X: 22.25, Y: 207.7388731352184, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 57.25, Y: 207.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 57.25, Y: 187.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 57.25, Y: 167.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 57.25, Y: 147.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 57.25, Y: 127.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 44.67225050021045, Y: 115.57130585113194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 39.92539153751602, Y: 98.72741063415452, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 44.298879749250176, Y: 81.78273368373578, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 56.6046824916709, Y: 69.340197971235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 73.5, Y: 64.77974597773965, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.3953175083291, Y: 69.340197971235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 102.70112025074984, Y: 81.78273368373581, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 107.07460846248398, Y: 98.72741063415452, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 102.32774949978955, Y: 115.57130585113191, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 127.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.75, Y: 147.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 167.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.75, Y: 187.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 207.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 107.25, Y: 207.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 124.75, Y: 207.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 124.75, Y: 187.7388731352184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 124.75, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 115.95286497225464, Y: 152.6107966774548, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 119.0095663877714, Y: 135.37986929484697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 132.47348615648588, Y: 124.20081985091184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 139.3528455802428, Y: 105.42119222098353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 146.23220500399978, Y: 86.64156459105527, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 153.11156442775675, Y: 67.86193696112696, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 160.00514936940718, Y: 51.77687312710191, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 177.29660876174523, Y: 49.08313520823657, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 188.75638154010687, Y: 62.30903403443102, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 183.62845932639024, Y: 79.04089602473204, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 176.74909990263328, Y: 97.82052365466035, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 169.8697404788763, Y: 116.6001512845886, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 162.99038105511931, Y: 135.37977891451692, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 166.04714415869086, Y: 152.61074520572194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 157.25, Y: 187.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.25, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 174.75, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 192.25, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.75, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 187.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.25, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.25, Y: 147.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.25, Y: 127.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 107.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 223.7012656127609, Y: 90.60242846762725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 234.74998212006702, Y: 77.03124152109348, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 252.250017879933, Y: 77.03124152109348, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 263.2987343872391, Y: 90.60242846762725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 107.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.75, Y: 127.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 147.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 187.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 187.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 147.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 277.25, Y: 127.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 265.1610934304466, Y: 113.46146413013486, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 263.6135885176399, Y: 94.81766359240459, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_10.svg


Warning: Font Verdana not found. Using default font.
Text: 'G', X: 249.47145289390897, Y: 80.67552796867363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 235.32931727017802, Y: 66.53339234494268, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 221.18718164644707, Y: 52.39125672121173, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 206.56055126671865, Y: 42.78329464117661, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 204.77689531379815, Y: 25.37439395680832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 217.15128927060644, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 234.56018995497476, Y: 14.783655952920526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 244.16815203500988, Y: 29.410286332648923, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 258.31028765874083, Y: 43.552421956379874, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 272.4524232824718, Y: 57.694557580110825, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 286.59455890620274, Y: 71.83669320384178, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 303.5844909982815, Y: 72.75440175875917, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 317.4715284016925, Y: 82.5854837765983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 323.98277180920087, Y: 98.3050159189172, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.11477825187285, Y: 115.0762589986756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 127.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.75, Y: 147.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.75, Y: 167.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 309.75, Y: 187.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 309.75, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 327.25, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 344.75, Y: 207.73887313521843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 227.7388731352184, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 16.176612496672945, Y: 98.94840130259047, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 106.0, Y: 167.7388731352184, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 116.82321795031453, Y: 98.54183279722653, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 181.98968783134225, Y: 156.1041280505755, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 203.5, Y: 147.73887313521843, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 276.0, Y: 167.73887313521843, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 231.57931727017802, Y: 94.81766359240459, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 293.4716232075987, Y: 54.89368566875538, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 323.5, Y: 227.73887313521843, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '91', X: 341.0, Y: 227.73887313521843, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -32.5 ± 1.1
 kcal/mol, AUC: 0.741', X: 108.75, Y: 240.53887313521844, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 359.0, 240.53887313521844)
Updated viewBox: -0.25 0.0 364.25 245.53887313521844
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_6.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_6.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '.((((......))).).(((.(((.((..(((((.((((((.((.(((((...))))))))))).......))..))))))).))))))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_10.svg', '-title', 'HCFC1, -32.2 ± 1.7\n kcal/mol, AUC: 0.668', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'A', X: 44.676701540002966, Y: 500.5763947054945, Width: 10.5, Height: 8
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Text: 'G', X: 40.86109829932502, Y: 483.4972931023387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 32.349606453755825, Y: 465.39882613513925, Width: 10.5, Height: 8
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Text: 'U', X: 23.838114608186658, Y: 447.3003591679398, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 12.060057182801131, Y: 404.63274787512677, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 27.89619384940758, Y: 397.18520282352523, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 44.80497504622534, Y: 401.69544342212015, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.8281150216045, Y: 416.0406801525833, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 53.24812342988574, Y: 433.4691849188899, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 61.759615275454934, Y: 451.5676518860893, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 70.2711071210241, Y: 469.66611885328876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 80.99233603224653, Y: 483.49743298583485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 77.17670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 94.67670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.17670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.17670154000297, Y: 480.5763947054945, Width: 10.5, Height: 8
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Text: 'C', X: 112.17670154000297, Y: 460.5763947054945, Width: 10.5, Height: 8
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Text: 'A', X: 108.3610826734203, Y: 443.49736304405957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 119.08242363255974, Y: 429.66605371105715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 127.59404164780753, Y: 411.56764608048064, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 136.10565966305532, Y: 393.46923844990414, Width: 10.5, Height: 8
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Text: 'U', X: 136.94624232815846, Y: 375.98951244683553, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 149.87358285375944, Y: 364.1941206646869, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 158.3851374393946, Y: 346.0956832035205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 159.22567024260763, Y: 328.6159300155645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 172.1530083878223, Y: 316.8204988922689, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 189.63643855979623, Y: 317.5807201277288, Width: 10.5, Height: 8
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Text: 'G', X: 208.43691534646473, Y: 310.7585450644561, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.2373921331332, Y: 303.9363700011833, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 246.03786891980167, Y: 297.11419493791055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.83834570647014, Y: 290.29201987463784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 275.12141083845825, Y: 277.43044702351756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 291.1275244921668, Y: 273.5618800513751, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 305.26966011589775, Y: 259.41974442764416, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 305.26966011589775, Y: 236.88887795971863, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 291.12752449216674, Y: 222.74674233598768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 276.9853888684358, Y: 208.60460671225673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.84325324470484, Y: 194.46247108852577, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 248.0685041658205, Y: 185.08382195960934, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.8694244393863, Y: 167.7224764419339, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 239.0905404925786, Y: 148.90634686022355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 229.8555144430881, Y: 135.08510151088075, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.8592558737948, Y: 118.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.8592558737948, Y: 98.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.8592558737948, Y: 78.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 233.8592558737948, Y: 58.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 233.8592558737948, Y: 38.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 234.79945701235195, Y: 21.477077958505106, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 250.10925587379484, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 265.41905473523764, Y: 21.477077958505106, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.35925587379484, Y: 38.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.35925587379484, Y: 58.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.35925587379484, Y: 78.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.35925587379484, Y: 98.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 266.35925587379484, Y: 118.95182584542641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 269.6667510628579, Y: 137.89066044666112, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 276.4456350096655, Y: 156.70679002837136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 285.82422363326765, Y: 171.48150069996296, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 299.9663592569986, Y: 185.62363632369392, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 314.10849488072955, Y: 199.76577194742487, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 328.2506305044605, Y: 213.90790757115582, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 345.058478884552, Y: 212.5311757144206, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 360.65356548155785, Y: 218.94930876113932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 371.623456450285, Y: 231.7579249981781, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 375.56777863557903, Y: 248.1543111936814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 371.623456450285, Y: 264.5506973891846, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.65356548155785, Y: 277.35931362622335, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 345.058478884552, Y: 283.77744667294206, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 328.25063050446056, Y: 282.4007148162069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 314.1084948807296, Y: 296.5428504399379, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.20486386145467, Y: 314.0533519319079, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 293.86377310328504, Y: 323.8162507853777, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 275.92438018428834, Y: 320.8427946529741, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 257.12390339761987, Y: 327.66496971624684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 238.3234266109514, Y: 334.48714477951955, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 219.52294982428293, Y: 341.30931984279226, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 200.72247303761446, Y: 348.13149490606503, Width: 10.5, Height: 8
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Text: 'U', X: 187.79509831379005, Y: 359.9269594051776, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_7.svg


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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 178.44298812609793, Y: 395.5051985322627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 165.5155720627421, Y: 407.30061772468184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 157.00395404749432, Y: 425.39902535525835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 148.49233603224653, Y: 443.4974329858348, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.67670154000297, Y: 460.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.67670154000297, Y: 480.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.67670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 162.17670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 179.67670154000297, Y: 500.5763947054945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 27.926701540002966, Y: 520.5763947054945, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 52.525500843312344, Y: 385.311700322988, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 88.5473621661966, Y: 458.3827981015055, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 179.06426898736618, Y: 298.7802413485857, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 259.09325324470484, Y: 222.74674233598768, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 210.8865814092008, Y: 33.43016065924877, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 283.4140808645601, Y: 139.82144376435616, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 368.62977701043144, Y: 293.56104079279766, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 215.07092541399254, Y: 356.64301777685466, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 158.42670154000297, Y: 520.5763947054945, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '91', X: 175.92670154000297, Y: 520.5763947054945, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -32.2 ± 1.7
 kcal/mol, AUC: 0.668', X: 124.15888931778952, Y: 533.3763947054945, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 386.62977701043144, 533.3763947054945)
Updated viewBox: -0.25 0.0 391.87977701043144 538.3763947054945
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_10.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_10.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CAGGUGUCACGACCCUAGGCACAGUGACAGGCACCGUCUCCACCAGCCUUGCCGGGGCGGGGGGCCACAGCACUAGUGCUUCCCUGGCCAC', '-structureDBN', '..((((..........((((...(((..((((...)))).)))..))))))))..(((.(((((....((((....))))))))).)))..', '-o', '/disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_7.svg', '-title', 'HCFC1, -32.0 ± 2.1\n kcal/mol, AUC: 0.74', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,6,7,11,16,18,19,24,25,26,30,31,36,37,39,46,49,50,51,54,55,56,57,59,60,61,62,63,64,70,74,76,77,78,80,81,85,86,87', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '32,65,38,71,8,44,13,14,79,82,83,20,84,88,58', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,69,72,73,12,21,22,23,27,28,29,41,42,45,47,48,52,53', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,68,9,10,75,15,17,89,90,91,33,34,35,40,43']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 7.7111821248482855, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 25.211182124848285, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 42.711182124848285, Y: 236.73300376905246, Width: 10.5, Height: 8
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Text: 'G', X: 42.711182124848285, Y: 216.73300376905243, Width: 10.5, Height: 8
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Text: 'U', X: 42.711182124848285, Y: 196.73300376905243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 42.711182124848285, Y: 176.73300376905243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 28.027680252706112, Y: 167.21219042334573, Width: 10.5, Height: 8
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Text: 'C', X: 18.185060475427242, Y: 152.74243058038675, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 14.723625667329493, Y: 135.58814298042276, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 18.1850667709488, Y: 118.43385665078594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 28.027691858543044, Y: 103.964100420011, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 42.71119722476623, Y: 94.44329246306302, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 59.93771441259793, Y: 91.3613742989437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 77.01141095676755, Y: 95.20064510348465, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.26036978059147, Y: 105.36028517732382, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 100.45472599758523, Y: 120.25038013162205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 103.15562555984275, Y: 137.54073164764353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.41499877862248, Y: 145.7013253550468, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 139.6743719974022, Y: 153.86191906245008, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 157.93374521618193, Y: 162.02251276985334, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 175.2185177461692, Y: 156.80008456882055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 192.44657366406864, Y: 162.20667379106365, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 203.64800232340102, Y: 176.3687751082493, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 204.94125559547427, Y: 194.37890041882437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 219.08339121920523, Y: 208.52103604255532, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.22552684293618, Y: 222.6631716662863, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 250.1432061256619, Y: 227.13982328274705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 260.1658974250624, Y: 241.48534318009644, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 258.55025012427905, Y: 258.91055381893227, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 266.9650104708014, Y: 277.054197562971, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 275.37977081732384, Y: 295.19784130700964, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 283.7945311638463, Y: 313.3414850510484, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 290.29388821777735, Y: 329.5898434228325, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 279.9717403740123, Y: 343.72151196493553, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.5163345842865, Y: 342.47267226008273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.31111007978336, Y: 327.01547061414726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 245.896349733261, Y: 308.8718268701085, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 237.48158938673856, Y: 290.7281831260699, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 229.06682904021613, Y: 272.5845393820312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 214.721238010292, Y: 262.56186419013954, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 210.24455645437337, Y: 245.64414205484908, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 196.10242083064242, Y: 231.50200643111813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 181.96028520691146, Y: 217.35987080738718, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 165.22534147650674, Y: 216.52967356414942, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 151.42339773373877, Y: 207.02946735354743, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.67278044165164, Y: 191.6939942503704, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 126.41340722287191, Y: 183.53340054296714, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 108.15403400409218, Y: 175.37280683556386, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 89.89466078531245, Y: 167.21221312816058, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 75.21118212484828, Y: 176.73300376905243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 75.21118212484828, Y: 196.73300376905243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 75.21118212484828, Y: 216.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 75.21118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 92.71118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 110.21118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 216.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 127.71118212484828, Y: 196.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.03280497335902, Y: 180.5574673389697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 164.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 144.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 124.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 104.38193090888694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.71118212484828, Y: 84.38193090888694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.33149857587128, Y: 70.29249098298169, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.33149927059702, Y: 52.79248675433661, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 127.71118393823619, Y: 38.70304765254929, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.42477226746266, Y: 33.51593736224868, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 160.9576630194918, Y: 39.25298114664366, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 180.05890244409676, Y: 33.324857291331796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 199.16014186870171, Y: 27.39673343601993, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 218.26138129330667, Y: 21.468609580708062, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.57588106855647, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 249.8121136205242, Y: 19.52962511289968, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 254.99923259336782, Y: 36.24324376231715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 245.31281603115406, Y: 50.81803658348127, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.89458255818846, Y: 52.508123645691114, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 208.7933431335835, Y: 58.43624750100298, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 189.69210370897855, Y: 64.36437135631485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 170.59086428437362, Y: 70.29249521162671, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 160.21118212484828, Y: 84.38193090888694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.21118212484828, Y: 104.38193090888694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.21118212484828, Y: 124.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.21118212484828, Y: 144.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 160.21118212484828, Y: 164.38193090888691, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 166.88955927633754, Y: 180.55746733896967, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 160.21118212484828, Y: 196.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.21118212484828, Y: 216.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.21118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 177.71118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 195.21118212484828, Y: 236.73300376905246, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 8.461182124848285, Y: 256.73300376905246, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: -4.0, Y: 110.67832229455624, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 158.40799801217523, Y: 142.4737100362959, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 281.3586542148401, Y: 268.6394372164486, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 194.57631214167125, Y: 274.0164006610069, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 91.46118212484828, Y: 176.73300376905243, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 103.96118212484828, Y: 164.38193090888691, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 170.3807785887849, Y: 14.22361786672684, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 185.84144582042606, Y: 76.53572364664518, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 173.96118212484828, Y: 256.73300376905246, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '91', X: 191.46118212484828, Y: 256.73300376905246, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -32.0 ± 2.1
 kcal/mol, AUC: 0.74', X: 87.50253517131281, Y: 361.52151196493554, Width: 133.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 300.79388821777735, 361.52151196493554)
Updated viewBox: -9.0 0.0 314.79388821777735 366.52151196493554
Updated SVG: /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/175853d4-5527-4e9f-ba49-437b82b8455c/final_image/HCFC1_fold_final_7.svg
