Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
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Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_3.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 159.20 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 159.20 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 159.20 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.86 MB
Based on canonical annotations, the following gene is in your area of interest: DVL1(-)
write fasta - Elapsed time since the previous call: 0.97 seconds
write fasta - Current memory usage: 172.86 MB
Length of region: 118 nt.
98.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.21 seconds
write dat - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fasta/DVL1.fasta" "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" --SHAPE "DVL1.dat"

fold - Elapsed time since the previous call: 0.19 seconds
fold - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_FE/DVL1.txt" -sh "DVL1.dat"

efn2 - Elapsed time since the previous call: 0.53 seconds
efn2 - Current memory usage: 176.47 MB
This region has 10 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 1 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 2 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 3 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 4 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 5 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 6 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 7 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 8 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 9 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp9.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/ct/DVL1.ct" 10 "/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/fold_dbn/DVL1_temp10.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.47 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '..........(((.((((((((((.((((.....))))......((((((...((((((((((((((...))))))..))))).)))..))))))....)))))))))).))).....', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_3.svg', '-title', 'DVL1, -51.7 ± 1.3\n kcal/mol, AUC: 0.802', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']
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Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

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Text: 'G', X: 312.58153369979703, Y: 298.57961981384824, Width: 10.5, Height: 8
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Text: 'C', X: 296.4243324675254, Y: 310.36710675296627, Width: 10.5, Height: 8
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Text: 'C', X: 280.26713123525377, Y: 322.1545936920844, Width: 10.5, Height: 8
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Text: 'G', X: 264.10993000298214, Y: 333.94208063120254, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 247.95272877071045, Y: 345.72956757032057, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 250.91066908845812, Y: 362.9777729574513, Width: 10.5, Height: 8
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Text: 'U', X: 248.29190645462825, Y: 380.28072306047295, Width: 10.5, Height: 8
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Text: 'G', X: 240.362401229056, Y: 395.88113801898044, Width: 10.5, Height: 8
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Text: 'C', X: 227.9274704098782, Y: 408.1946466790765, Width: 10.5, Height: 8
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Text: 'A', X: 212.25, Y: 415.9706946179331, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 435.9706946179331, Width: 10.5, Height: 8
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Text: 'A', X: 212.25, Y: 455.9706946179331, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 475.9706946179331, Width: 10.5, Height: 8
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Text: 'C', X: 212.25, Y: 495.970694617933, Width: 10.5, Height: 8
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Text: 'U', X: 212.25, Y: 515.9706946179331, Width: 10.5, Height: 8
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Text: 'C', X: 212.25, Y: 535.9706946179331, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 555.9706946179331, Width: 10.5, Height: 8
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Text: 'C', X: 212.25, Y: 575.9706946179331, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 595.9706946179331, Width: 10.5, Height: 8
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Text: 'U', X: 218.92837715148926, Y: 612.1462310480158, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 628.3217674780985, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 648.3217674780985, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 668.3217674780985, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.75, Y: 668.3217674780985, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 247.25, Y: 668.3217674780985, Width: 10.5, Height: 8
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Text: 'U', X: 264.75, Y: 668.3217674780985, Width: 10.5, Height: 8
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Text: 'G', X: 282.25, Y: 668.3217674780985, Width: 10.5, Height: 8
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Text: 'C', X: 299.75, Y: 668.3217674780985, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 688.3217674780985, Width: 9.0, Height: 8
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Text: '10', X: 158.5, Y: 688.3217674780985, Width: 18.0, Height: 8
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Text: '20', X: 156.0, Y: 495.970694617933, Width: 18.0, Height: 8
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Text: '30', X: 84.39365948810098, Y: 445.78722842511183, Width: 18.0, Height: 8
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Text: '40', X: 130.87525050689396, Y: 320.5616640767683, Width: 18.0, Height: 8
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Text: '50', X: 290.8449204852938, Y: 247.29562966339444, Width: 18.0, Height: 8
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Text: '60', X: 436.21436379294636, Y: 155.07470858026943, Width: 18.0, Height: 8
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Text: '70', X: 519.6878719523495, Y: 10.862960720867818, Width: 18.0, Height: 8
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Text: '80', X: 487.47960542897107, Y: 206.33995021629414, Width: 18.0, Height: 8
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Text: '90', X: 333.0218975305417, Y: 305.1079265694215, Width: 18.0, Height: 8
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Text: '100', X: 221.78435170653557, Y: 425.12038501587796, Width: 27.0, Height: 8
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Text: '110', X: 230.67837715148926, Y: 612.1462310480158, Width: 27.0, Height: 8
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Text: '118', X: 291.5, Y: 688.3217674780985, Width: 27.0, Height: 8
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Text: 'DVL1, -51.7 ± 1.3
 kcal/mol, AUC: 0.802', X: 193.42766108382193, Y: 701.1217674780985, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 2.862960720867818, 537.6878719523495, 701.1217674780985)
Updated viewBox: -0.25 -2.137039279132182 542.9378719523495 708.2588067572307
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_3.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_3.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '...(((((.....(((((((((...((((.....)))).)))))))))......))))).(((((((...))))))).((..(((((...)))))..)).((((((....))))))..', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_8.svg', '-title', 'DVL1, -53.7 ± 1.6\n kcal/mol, AUC: 0.679', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_8.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 6.055592386464468, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 23.55559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'A', X: 41.05559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 58.55559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 58.55559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 58.55559238646447, Y: 430.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 58.55559238646447, Y: 410.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 58.55559238646447, Y: 390.87279694194433, Width: 10.5, Height: 8
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Text: 'A', X: 43.55015641668231, Y: 381.8681170673211, Width: 10.5, Height: 8
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Text: 'A', X: 32.88088079900342, Y: 367.9967823773326, Width: 10.5, Height: 8
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Text: 'C', X: 28.02794613189289, Y: 351.1832047269801, Width: 10.5, Height: 8
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Text: 'C', X: 29.664614593335244, Y: 333.75998215952734, Width: 10.5, Height: 8
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Text: 'C', X: 37.56382626009332, Y: 318.14429058561905, Width: 10.5, Height: 8
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Text: 'C', X: 50.62969981170228, Y: 306.5025417212498, Width: 10.5, Height: 8
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Text: 'U', X: 46.9048998981596, Y: 286.8524560826561, Width: 10.5, Height: 8
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Text: 'G', X: 43.180099984616916, Y: 267.20237044406224, Width: 10.5, Height: 8
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Text: 'C', X: 39.45530007107425, Y: 247.55228480546833, Width: 10.5, Height: 8
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Text: 'G', X: 35.73050015753154, Y: 227.90219916687454, Width: 10.5, Height: 8
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Text: 'A', X: 32.005700243988855, Y: 208.25211352828057, Width: 10.5, Height: 8
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Text: 'G', X: 28.280900330446173, Y: 188.60202788968672, Width: 10.5, Height: 8
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Text: 'U', X: 24.55610041690349, Y: 168.951942251093, Width: 10.5, Height: 8
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Text: 'U', X: 20.831300503360808, Y: 149.30185661249902, Width: 10.5, Height: 8
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Text: 'C', X: 8.009199202350715, Y: 137.39203280062475, Width: 10.5, Height: 8
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Text: 'U', X: 4.75, Y: 120.19820235006353, Width: 10.5, Height: 8
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Text: 'U', X: 12.324069576886387, Y: 104.42215547362025, Width: 10.5, Height: 8
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Text: 'C', X: 27.779196352964647, Y: 96.21306043588311, Width: 10.5, Height: 8
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Text: 'G', X: 36.43527504426311, Y: 78.18329888199537, Width: 10.5, Height: 8
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Text: 'U', X: 45.0913537355616, Y: 60.15353732810763, Width: 10.5, Height: 8
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Text: 'G', X: 53.74743242686007, Y: 42.123775774219894, Width: 10.5, Height: 8
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Text: 'G', X: 54.76043432421258, Y: 24.65309648022503, Width: 10.5, Height: 8
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Text: 'A', X: 67.81631998012413, Y: 13.0, Width: 10.5, Height: 8
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Text: 'C', X: 85.28939290013295, Y: 13.970840136026709, Width: 10.5, Height: 8
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Text: 'A', X: 96.9739608451029, Y: 26.99856748107993, Width: 10.5, Height: 8
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Text: 'U', X: 96.04528812374726, Y: 44.47393227882526, Width: 10.5, Height: 8
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Text: 'C', X: 83.04579495192765, Y: 56.18990364757997, Width: 10.5, Height: 8
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Text: 'A', X: 74.38971626062917, Y: 74.2196652014677, Width: 10.5, Height: 8
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Text: 'U', X: 65.7336375693307, Y: 92.24942675535544, Width: 10.5, Height: 8
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Text: 'G', X: 57.07755887803222, Y: 110.27918830924318, Width: 10.5, Height: 8
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Text: 'U', X: 60.33675538952771, Y: 127.47301388994083, Width: 10.5, Height: 8
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Text: 'G', X: 52.76268966607583, Y: 143.24905675299215, Width: 10.5, Height: 8
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Text: 'A', X: 56.48748957961851, Y: 162.8991423915861, Width: 10.5, Height: 8
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Text: 'C', X: 60.212289493161194, Y: 182.54922803017985, Width: 10.5, Height: 8
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Text: 'U', X: 63.937089406703876, Y: 202.1993136687737, Width: 10.5, Height: 8
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Text: 'C', X: 67.66188932024656, Y: 221.84939930736766, Width: 10.5, Height: 8
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Text: 'G', X: 71.38668923378924, Y: 241.49948494596146, Width: 10.5, Height: 8
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Text: 'U', X: 75.11148914733192, Y: 261.14957058455536, Width: 10.5, Height: 8
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Text: 'G', X: 78.8362890608746, Y: 280.7996562231492, Width: 10.5, Height: 8
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Text: 'G', X: 82.56108897441729, Y: 300.44974186174306, Width: 10.5, Height: 8
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Text: 'C', X: 98.98109122997386, Y: 306.50230544484714, Width: 10.5, Height: 8
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Text: 'G', X: 112.0471252184692, Y: 318.1439872740109, Width: 10.5, Height: 8
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Text: 'C', X: 119.94648528872216, Y: 333.75968804216393, Width: 10.5, Height: 8
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Text: 'A', X: 121.58326011426044, Y: 351.1829761408692, Width: 10.5, Height: 8
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Text: 'U', X: 116.73037306428873, Y: 367.99664579624823, Width: 10.5, Height: 8
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Text: 'G', X: 106.06108549629114, Y: 381.8680661557995, Width: 10.5, Height: 8
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Text: 'C', X: 91.05559238646447, Y: 390.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.05559238646447, Y: 410.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.05559238646447, Y: 430.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.05559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 91.05559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 108.55559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 126.05559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 126.05559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 126.05559238646447, Y: 430.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 126.05559238646447, Y: 410.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 126.05559238646447, Y: 390.87279694194433, Width: 10.5, Height: 8
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Text: 'C', X: 126.05559238646447, Y: 370.87279694194433, Width: 10.5, Height: 8
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Text: 'C', X: 126.05559238646447, Y: 350.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 126.99579352502161, Y: 333.39804905502297, Width: 10.5, Height: 8
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Text: 'G', X: 142.30559238646447, Y: 324.92097109651786, Width: 10.5, Height: 8
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Text: 'A', X: 157.61539124790733, Y: 333.39804905502297, Width: 10.5, Height: 8
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Text: 'G', X: 158.55559238646447, Y: 350.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 158.55559238646447, Y: 370.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 158.55559238646447, Y: 390.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 158.55559238646447, Y: 410.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 158.55559238646447, Y: 430.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 158.55559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 158.55559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 176.05559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 193.55559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'C', X: 193.55559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 183.1759090690627, Y: 436.78335772081334, Width: 10.5, Height: 8
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Text: 'G', X: 183.1759090690627, Y: 419.28335419694235, Width: 10.5, Height: 8
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Text: 'G', X: 193.55559238646447, Y: 405.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 193.55559238646447, Y: 385.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 193.55559238646447, Y: 365.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 193.55559238646447, Y: 345.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 193.55559238646447, Y: 325.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 194.4957935250216, Y: 307.7191670888899, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.80559238646447, Y: 299.2420891303848, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 225.11539124790733, Y: 307.7191670888899, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 226.05559238646447, Y: 325.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 226.05559238646447, Y: 345.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 226.05559238646447, Y: 365.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 226.05559238646447, Y: 385.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 226.05559238646447, Y: 405.19391497581125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 236.43527570386624, Y: 419.28335419694235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 236.43527570386624, Y: 436.78335772081334, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 226.05559238646447, Y: 450.87279694194433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 226.05559238646447, Y: 470.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 293.55559238646447, Y: 370.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 293.55559238646447, Y: 390.87279694194433, Width: 10.5, Height: 8
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Text: 'G', X: 293.55559238646447, Y: 410.87279694194433, Width: 10.5, Height: 8
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Text: 'C', X: 293.55559238646447, Y: 430.87279694194433, Width: 10.5, Height: 8
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Text: 'U', X: 293.55559238646447, Y: 450.8727969419444, Width: 10.5, Height: 8
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Text: 'U', X: 293.55559238646447, Y: 470.8727969419444, Width: 10.5, Height: 8
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Text: 'G', X: 311.05559238646447, Y: 470.8727969419444, Width: 10.5, Height: 8
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Text: 'C', X: 328.55559238646447, Y: 470.8727969419444, Width: 10.5, Height: 8
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Text: '40', X: 69.00451054328376, Y: 142.67713192083903, Width: 18.0, Height: 8
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Text: '50', X: 124.15011747252035, Y: 305.9504382995329, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_2.svg


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Text: '80', X: 178.07666486545733, Y: 467.0725580268172, Width: 18.0, Height: 8
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Text: '90', X: 238.31651260508283, Y: 297.1050498512526, Width: 18.0, Height: 8
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Text: '100', X: 235.30559238646447, Y: 490.8727969419444, Width: 27.0, Height: 8
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Text: '110', X: 308.2832300264339, Y: 348.99106846871575, Width: 27.0, Height: 8
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Text: '118', X: 320.30559238646447, Y: 490.8727969419444, Width: 27.0, Height: 8
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Text: 'DVL1, -53.7 ± 1.6
 kcal/mol, AUC: 0.679', X: 100.65279619323223, Y: 503.6727969419444, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 347.30559238646447, 503.6727969419444)
Updated viewBox: -0.25 0.0 352.55559238646447 508.6727969419444
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_8.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '....(((....))).((((((((..(((((...((.(((.....((((((...((((((((((((((...))))))..))))).)))..))))))..)))))..))))).))))))))', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_2.svg', '-title', 'DVL1, -52.8 ± 1.6\n kcal/mol, AUC: 0.813', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']
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Text: 'C', X: 201.12845932639024, Y: 168.02031583284622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_1.svg


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Text: 'G', X: 174.75, Y: 256.7182929433326, Width: 10.5, Height: 8
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Text: 'G', X: 174.75, Y: 276.7182929433326, Width: 10.5, Height: 8
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Text: 'G', X: 174.75, Y: 296.7182929433326, Width: 10.5, Height: 8
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Text: 'C', X: 174.75, Y: 316.7182929433326, Width: 10.5, Height: 8
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Text: 'U', X: 174.75, Y: 336.7182929433326, Width: 10.5, Height: 8
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Text: 'U', X: 174.75, Y: 356.7182929433326, Width: 10.5, Height: 8
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Text: 'G', X: 174.75, Y: 376.7182929433326, Width: 10.5, Height: 8
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Text: 'C', X: 174.75, Y: 396.7182929433326, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 416.7182929433326, Width: 9.0, Height: 8
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Text: '118', X: 166.5, Y: 416.7182929433326, Width: 27.0, Height: 8
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Text: 'DVL1, -52.8 ± 1.6
 kcal/mol, AUC: 0.813', X: 314.33134875986076, Y: 429.5182929433326, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 785.7611367958386, 429.5182929433326)
Updated viewBox: -0.25 0.0 791.0111367958386 434.5182929433326
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_2.svg
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Text: 'C', X: 118.51610374292216, Y: 506.7097844844884, Width: 10.5, Height: 8
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Text: 'C', X: 118.51610374292216, Y: 526.7097844844884, Width: 10.5, Height: 8
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Text: 'G', X: 153.51610374292216, Y: 486.7097844844884, Width: 10.5, Height: 8
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Text: 'G', X: 117.86346258600838, Y: 378.55714332757464, Width: 10.5, Height: 8
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Text: 'G', X: 50.70182584542653, Y: 24.010920218618253, Width: 10.5, Height: 8
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Text: 'G', X: 90.70182584542653, Y: 24.010920218618253, Width: 10.5, Height: 8
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Text: 'G', X: 110.70182584542653, Y: 24.010920218618253, Width: 10.5, Height: 8
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Text: 'G', X: 130.70182584542653, Y: 24.010920218618253, Width: 10.5, Height: 8
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Text: 'G', X: 254.7282488801531, Y: 108.1307062629545, Width: 10.5, Height: 8
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Text: 'G', X: 264.24864040987444, Y: 125.71939993590274, Width: 10.5, Height: 8
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Text: 'U', X: 273.76903193959583, Y: 143.30809360885087, Width: 10.5, Height: 8
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Text: 'C', X: 290.19914851837046, Y: 149.33314706984822, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_7.svg


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Text: '100', X: 389.5439352111872, Y: 328.62893358433666, Width: 27.0, Height: 8
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Text: '110', X: 222.84592084001906, Y: 410.51065229531815, Width: 27.0, Height: 8
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Text: '118', X: 177.76610374292216, Y: 546.7097844844884, Width: 27.0, Height: 8
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Text: 'DVL1, -50.6 ± 1.6
 kcal/mol, AUC: 0.817', X: 141.39428776994873, Y: 559.5097844844884, Width: 142.5, Height: 23
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Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_1.svg
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Text: 'G', X: 77.58390981350671, Y: 275.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 77.58390981350671, Y: 255.02852168301834, Width: 10.5, Height: 8
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Text: 'G', X: 77.58390981350671, Y: 235.02852168301834, Width: 10.5, Height: 8
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Text: 'A', X: 62.33762182426281, Y: 226.4376258274753, Width: 10.5, Height: 8
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Text: 'A', X: 51.042087452021136, Y: 213.07111198514315, Width: 10.5, Height: 8
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Text: 'C', X: 45.11416805175624, Y: 196.605615921079, Width: 10.5, Height: 8
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Text: 'C', X: 45.297435342773284, Y: 179.10649588172294, Width: 10.5, Height: 8
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Text: 'C', X: 63.141900670125935, Y: 149.64175030179456, Width: 10.5, Height: 8
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Text: 'G', X: 36.8327103775453, Y: 74.09159142605972, Width: 10.5, Height: 8
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Text: 'A', X: 30.25541280440011, Y: 55.20405170712604, Width: 10.5, Height: 8
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Text: 'G', X: 193.48788112657144, Y: 229.71970421773165, Width: 10.5, Height: 8
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Text: 'U', X: 210.59520514148988, Y: 240.08018031917578, Width: 10.5, Height: 8
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Text: 'G', X: 227.70252915640833, Y: 250.44065642061986, Width: 10.5, Height: 8
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Text: 'C', X: 271.57677939654945, Y: 285.7797880761932, Width: 10.5, Height: 8
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Text: 'G', X: 262.5113552734401, Y: 300.74870903003557, Width: 10.5, Height: 8
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Text: 'U', X: 246.76379876839354, Y: 308.38185865352636, Width: 10.5, Height: 8
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Text: 'G', X: 229.39720102790386, Y: 306.22505732418426, Width: 10.5, Height: 8
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Text: 'G', X: 215.99520083659272, Y: 294.97175114660564, Width: 10.5, Height: 8
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Text: 'C', X: 210.86675549156166, Y: 278.2400579448624, Width: 10.5, Height: 8
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Text: 'G', X: 193.75943147664321, Y: 267.87958184341824, Width: 10.5, Height: 8
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Text: 'C', X: 176.65210746172477, Y: 257.51910574197416, Width: 10.5, Height: 8
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Text: 'A', X: 159.54478344680632, Y: 247.15862964053002, Width: 10.5, Height: 8
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Text: 'U', X: 142.43745943188787, Y: 236.79815353908594, Width: 10.5, Height: 8
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Text: 'G', X: 125.33013541696943, Y: 226.43767743764184, Width: 10.5, Height: 8
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Text: 'C', X: 110.08390981350671, Y: 235.02852168301834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 110.08390981350671, Y: 255.02852168301834, Width: 10.5, Height: 8
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Text: 'C', X: 110.08390981350671, Y: 275.0285216830183, Width: 10.5, Height: 8
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Text: 'C', X: 110.08390981350671, Y: 295.0285216830183, Width: 10.5, Height: 8
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Text: 'A', X: 110.08390981350671, Y: 315.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 127.58390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 145.08390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 145.08390981350672, Y: 295.0285216830183, Width: 10.5, Height: 8
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Text: 'C', X: 145.08390981350672, Y: 275.0285216830183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 145.08390981350672, Y: 255.02852168301834, Width: 10.5, Height: 8
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Text: 'G', X: 145.08390981350672, Y: 235.02852168301834, Width: 10.5, Height: 8
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Text: 'C', X: 145.08390981350672, Y: 215.02852168301834, Width: 10.5, Height: 8
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Text: 'C', X: 145.08390981350672, Y: 195.0285216830183, Width: 10.5, Height: 8
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Text: 'U', X: 146.02411095206386, Y: 177.5537737960969, Width: 10.5, Height: 8
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Text: 'G', X: 161.33390981350672, Y: 169.07669583759184, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 195.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 215.02852168301834, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 255.02852168301834, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 275.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 295.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 177.58390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
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Text: 'A', X: 195.08390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
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Text: 'G', X: 212.58390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
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Text: 'C', X: 212.58390981350672, Y: 295.0285216830183, Width: 10.5, Height: 8
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Text: 'U', X: 202.20422649610495, Y: 280.93908246188727, Width: 10.5, Height: 8
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Text: 'G', X: 212.58390981350672, Y: 249.34963971688524, Width: 10.5, Height: 8
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Text: 'C', X: 212.58390981350672, Y: 229.34963971688524, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 212.58390981350672, Y: 209.34963971688524, Width: 10.5, Height: 8
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Text: 'G', X: 212.58390981350672, Y: 189.34963971688524, Width: 10.5, Height: 8
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Text: 'U', X: 212.58390981350672, Y: 169.34963971688524, Width: 10.5, Height: 8
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Text: 'C', X: 213.52411095206386, Y: 151.87489182996381, Width: 10.5, Height: 8
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Text: 'U', X: 244.14370867494958, Y: 151.87489182996381, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.08390981350672, Y: 189.34963971688524, Width: 10.5, Height: 8
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Text: 'C', X: 245.08390981350672, Y: 209.34963971688524, Width: 10.5, Height: 8
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Text: 'G', X: 245.08390981350672, Y: 229.34963971688524, Width: 10.5, Height: 8
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Text: 'C', X: 245.08390981350672, Y: 249.34963971688524, Width: 10.5, Height: 8
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Text: 'U', X: 255.46359313090846, Y: 280.93908246188727, Width: 10.5, Height: 8
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Text: 'G', X: 245.08390981350672, Y: 295.02852168301837, Width: 10.5, Height: 8
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Text: 'C', X: 245.08390981350672, Y: 315.0285216830183, Width: 10.5, Height: 8
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Text: 'A', X: 262.5839098135067, Y: 315.02852168301837, Width: 10.5, Height: 8
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Text: 'G', X: 280.0839098135067, Y: 315.02852168301837, Width: 10.5, Height: 8
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Text: 'A', X: 280.0839098135067, Y: 295.02852168301837, Width: 10.5, Height: 8
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Text: 'G', X: 280.0839098135067, Y: 275.02852168301837, Width: 10.5, Height: 8
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Text: 'C', X: 280.0839098135067, Y: 255.02852168301837, Width: 10.5, Height: 8
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Text: 'U', X: 280.0839098135067, Y: 235.02852168301837, Width: 10.5, Height: 8
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Text: 'C', X: 280.0839098135067, Y: 215.02852168301837, Width: 10.5, Height: 8
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Text: 'G', X: 276.5351754262676, Y: 197.89207701542716, Width: 10.5, Height: 8
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Text: 'G', X: 312.5839098135067, Y: 235.02852168301837, Width: 10.5, Height: 8
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Text: 'G', X: 312.5839098135067, Y: 255.02852168301837, Width: 10.5, Height: 8
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Text: 'C', X: 312.5839098135067, Y: 275.02852168301837, Width: 10.5, Height: 8
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Text: 'U', X: 312.5839098135067, Y: 295.02852168301837, Width: 10.5, Height: 8
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Text: 'U', X: 312.5839098135067, Y: 315.02852168301837, Width: 10.5, Height: 8
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Text: 'G', X: 330.0839098135067, Y: 315.02852168301837, Width: 10.5, Height: 8
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Text: 'C', X: 347.5839098135067, Y: 315.02852168301837, Width: 10.5, Height: 8
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Text: '110', X: 327.3115474534761, Y: 193.14679320978965, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_10.svg


Text: '118', X: 339.3339098135067, Y: 335.02852168301837, Width: 27.0, Height: 8
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Text: 'DVL1, -49.0 ± 1.4
 kcal/mol, AUC: 0.685', X: 117.11863316780091, Y: 347.8285216830184, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 366.3339098135067, 347.8285216830184)
Updated viewBox: -9.0 0.0 380.3339098135067 352.8285216830184
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_7.svg
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Text: 'C', X: 450.57474712039385, Y: 208.83506218665315, Width: 10.5, Height: 8
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Text: 'G', X: 450.57474712039385, Y: 228.83506218665315, Width: 10.5, Height: 8
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Text: 'U', X: 450.57474712039385, Y: 248.83506218665315, Width: 10.5, Height: 8
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Text: 'G', X: 450.57474712039385, Y: 268.83506218665315, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_6.svg


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Text: '1', X: 298.82474712039385, Y: 288.83506218665315, Width: 9.0, Height: 8
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Text: '40', X: 394.32474712039385, Y: 168.83506218665312, Width: 18.0, Height: 8
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Text: '60', X: 123.69860928855425, Y: 175.9289141338489, Width: 18.0, Height: 8
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Text: '70', X: -4.0, Y: 283.128608059034, Width: 18.0, Height: 8
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Text: '80', X: 92.84445134836596, Y: 110.32197137775094, Width: 18.0, Height: 8
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Text: '110', X: 462.32474712039385, Y: 248.83506218665315, Width: 27.0, Height: 8
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Text: '118', X: 564.8247471203938, Y: 288.83506218665315, Width: 27.0, Height: 8
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Text: 'DVL1, -50.3 ± 1.7
 kcal/mol, AUC: 0.614', X: 230.18987936649847, Y: 309.92411244075, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 591.8247471203938, 309.92411244075)
Updated viewBox: -9.0 0.0 605.8247471203938 314.92411244075
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_10.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_10.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '..........(((.((((((((((.(((......((((.....))))(((((.((((((((((((((...))))))..))))).)))..)).)))))).)))))))))).))).....', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_6.svg', '-title', 'DVL1, -48.1 ± 1.3\n kcal/mol, AUC: 0.699', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']
Warning: Font Verdana not found. Using default font.
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Text: 'G', X: 74.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 92.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 109.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 127.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'A', X: 144.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'A', X: 162.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 569.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 549.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 173.07162284851074, Y: 533.756146553038, Width: 10.5, Height: 8
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Text: 'U', X: 179.75, Y: 517.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 179.75, Y: 497.5806101229552, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 477.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 179.75, Y: 457.5806101229552, Width: 10.5, Height: 8
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Text: 'A', X: 179.75, Y: 437.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 179.75, Y: 417.5806101229552, Width: 10.5, Height: 8
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Text: 'U', X: 179.75, Y: 397.5806101229552, Width: 10.5, Height: 8
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Text: 'U', X: 179.75, Y: 377.5806101229552, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 357.5806101229552, Width: 10.5, Height: 8
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Text: 'U', X: 179.75, Y: 337.5806101229552, Width: 10.5, Height: 8
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Text: 'U', X: 173.07162284851074, Y: 321.40507369287235, Width: 10.5, Height: 8
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Text: 'C', X: 179.75, Y: 305.2295372627896, Width: 10.5, Height: 8
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Text: 'G', X: 179.75, Y: 285.2295372627896, Width: 10.5, Height: 8
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Text: 'U', X: 179.75, Y: 265.2295372627896, Width: 10.5, Height: 8
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Text: 'G', X: 165.02559265644499, Y: 254.54048640785896, Width: 10.5, Height: 8
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Text: 'G', X: 156.3394130109788, Y: 238.55254523443324, Width: 10.5, Height: 8
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Text: 'A', X: 155.38476644129884, Y: 220.382442600567, Width: 10.5, Height: 8
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Text: 'A', X: 175.87099396489108, Y: 191.39913760091014, Width: 10.5, Height: 8
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Text: 'U', X: 193.31823211574573, Y: 186.23601250988287, Width: 10.5, Height: 8
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Text: 'C', X: 211.2882607412959, Y: 189.08944044749416, Width: 10.5, Height: 8
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Text: 'A', X: 225.4303963650268, Y: 174.94730482376332, Width: 10.5, Height: 8
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Text: 'U', X: 239.57253198875776, Y: 160.80516920003225, Width: 10.5, Height: 8
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Text: 'G', X: 253.7146676124887, Y: 146.66303357630142, Width: 10.5, Height: 8
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Text: 'U', X: 260.4603748724506, Y: 130.51539469624942, Width: 10.5, Height: 8
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Text: 'G', X: 276.64038197399196, Y: 123.84769809009407, Width: 10.5, Height: 8
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Text: 'A', X: 292.8042520270867, Y: 130.55441955026612, Width: 10.5, Height: 8
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Text: 'C', X: 299.5109734872588, Y: 146.71828960336092, Width: 10.5, Height: 8
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Text: 'U', X: 292.84327688110346, Y: 162.8982967049023, Width: 10.5, Height: 8
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Text: 'C', X: 276.6956380010515, Y: 169.64400396486423, Width: 10.5, Height: 8
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Text: 'G', X: 262.55350237732057, Y: 183.78613958859506, Width: 10.5, Height: 8
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Text: 'U', X: 248.41136675358962, Y: 197.92827521232613, Width: 10.5, Height: 8
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Text: 'G', X: 234.26923112985867, Y: 212.07041083605696, Width: 10.5, Height: 8
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Text: 'G', X: 237.09994290117197, Y: 224.34874445451516, Width: 10.5, Height: 8
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Text: 'C', X: 256.0063180959554, Y: 230.8717021421043, Width: 10.5, Height: 8
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Text: 'G', X: 274.91269329073884, Y: 237.39465982969347, Width: 10.5, Height: 8
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Text: 'C', X: 294.1163053142875, Y: 240.61429537917235, Width: 10.5, Height: 8
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Text: 'A', X: 314.1163053142875, Y: 240.61429537917235, Width: 10.5, Height: 8
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Text: 'U', X: 329.24435603619173, Y: 231.81716491693925, Width: 10.5, Height: 8
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Text: 'G', X: 346.47526396441293, Y: 234.8738354885284, Width: 10.5, Height: 8
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Text: 'C', X: 365.25484918284803, Y: 227.99436028881047, Width: 10.5, Height: 8
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Text: 'C', X: 384.03443440128314, Y: 221.11488508909252, Width: 10.5, Height: 8
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Text: 'C', X: 398.8678595628282, Y: 211.6432510751934, Width: 10.5, Height: 8
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Text: 'C', X: 413.00999518655914, Y: 197.50111545146245, Width: 10.5, Height: 8
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Text: 'A', X: 427.1521308102901, Y: 183.3589798277315, Width: 10.5, Height: 8
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Text: 'G', X: 441.29426643402104, Y: 169.21684420400055, Width: 10.5, Height: 8
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Text: 'C', X: 455.436402057752, Y: 155.0747085802696, Width: 10.5, Height: 8
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Text: 'C', X: 462.114718751075, Y: 138.95182584542664, Width: 10.5, Height: 8
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Text: 'C', X: 462.114718751075, Y: 118.95182584542664, Width: 10.5, Height: 8
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Text: 'U', X: 462.114718751075, Y: 98.95182584542658, Width: 10.5, Height: 8
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Text: 'G', X: 462.114718751075, Y: 78.95182584542658, Width: 10.5, Height: 8
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Text: 'C', X: 462.114718751075, Y: 58.95182584542658, Width: 10.5, Height: 8
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Text: 'C', X: 462.114718751075, Y: 38.95182584542658, Width: 10.5, Height: 8
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Text: 'U', X: 463.0549198896321, Y: 21.477077958505106, Width: 10.5, Height: 8
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Text: 'G', X: 478.364718751075, Y: 13.0, Width: 10.5, Height: 8
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Text: 'A', X: 493.6745176125178, Y: 21.477077958505106, Width: 10.5, Height: 8
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Text: 'G', X: 494.614718751075, Y: 38.95182584542658, Width: 10.5, Height: 8
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Text: 'G', X: 494.614718751075, Y: 58.95182584542658, Width: 10.5, Height: 8
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Text: 'U', X: 494.614718751075, Y: 78.95182584542658, Width: 10.5, Height: 8
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Text: 'G', X: 494.614718751075, Y: 98.95182584542658, Width: 10.5, Height: 8
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Text: 'G', X: 494.614718751075, Y: 118.95182584542664, Width: 10.5, Height: 8
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Text: 'G', X: 494.614718751075, Y: 138.95182584542664, Width: 10.5, Height: 8
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Text: 'G', X: 501.2930891849876, Y: 155.1449135209685, Width: 10.5, Height: 8
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Text: 'A', X: 494.5899355711341, Y: 171.32775788620376, Width: 10.5, Height: 8
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Text: 'G', X: 478.4173724463148, Y: 178.0556789688324, Width: 10.5, Height: 8
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Text: 'C', X: 464.27523682258385, Y: 192.19781459256336, Width: 10.5, Height: 8
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Text: 'U', X: 450.1331011988529, Y: 206.3399502162943, Width: 10.5, Height: 8
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Text: 'G', X: 435.99096557512195, Y: 220.48208584002526, Width: 10.5, Height: 8
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Text: 'G', X: 421.848829951391, Y: 234.62422146375621, Width: 10.5, Height: 8
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Text: 'C', X: 412.5165854654939, Y: 249.36942695587828, Width: 10.5, Height: 8
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Text: 'G', X: 395.21358160082474, Y: 251.63171106904957, Width: 10.5, Height: 8
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Text: 'G', X: 376.43399638238964, Y: 258.5111862687675, Width: 10.5, Height: 8
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Text: 'U', X: 357.65441116395453, Y: 265.39066146848546, Width: 10.5, Height: 8
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Text: 'C', X: 346.475399534989, Y: 278.85467643429166, Width: 10.5, Height: 8
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Text: 'C', X: 329.244433243784, Y: 281.91143953786315, Width: 10.5, Height: 8
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Text: 'U', X: 314.1163053142875, Y: 273.11429537917235, Width: 10.5, Height: 8
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Text: 'G', X: 294.1163053142875, Y: 273.11429537917235, Width: 10.5, Height: 8
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Text: 'C', X: 278.1205182834403, Y: 277.1415676226139, Width: 10.5, Height: 8
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Text: 'C', X: 264.3128870484064, Y: 268.1175195212165, Width: 10.5, Height: 8
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Text: 'G', X: 245.40651185362304, Y: 261.5945618336273, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_4.svg


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Text: 'A', X: 212.25, Y: 265.2295372627896, Width: 10.5, Height: 8
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Text: 'U', X: 212.25, Y: 285.2295372627896, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 305.2295372627896, Width: 10.5, Height: 8
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Text: 'C', X: 218.92837715148926, Y: 321.40507369287235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 212.25, Y: 337.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 357.5806101229552, Width: 10.5, Height: 8
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Text: 'A', X: 212.25, Y: 377.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 397.5806101229552, Width: 10.5, Height: 8
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Text: 'C', X: 212.25, Y: 417.5806101229552, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 212.25, Y: 437.5806101229552, Width: 10.5, Height: 8
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Text: 'C', X: 212.25, Y: 457.5806101229552, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 212.25, Y: 477.5806101229552, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 212.25, Y: 497.5806101229552, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 517.5806101229552, Width: 10.5, Height: 8
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Text: 'U', X: 218.92837715148926, Y: 533.756146553038, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 549.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 569.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 212.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 229.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'U', X: 247.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'U', X: 264.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'G', X: 282.25, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: 'C', X: 299.75, Y: 589.9316829831207, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 609.9316829831207, Width: 9.0, Height: 8
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Text: '10', X: 158.5, Y: 609.9316829831207, Width: 18.0, Height: 8
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Text: '20', X: 156.0, Y: 417.5806101229552, Width: 18.0, Height: 8
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Text: '30', X: 133.34137765241917, Y: 243.98514450509896, Width: 18.0, Height: 8
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Text: '40', X: 272.914513172255, Y: 103.84771264796768, Width: 18.0, Height: 8
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Text: '50', X: 277.68565097832806, Y: 218.4882846349101, Width: 18.0, Height: 8
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Text: '60', X: 423.4021308102901, Y: 155.0747085802696, Width: 18.0, Height: 8
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Text: '70', X: 506.8756389696932, Y: 10.862960720867818, Width: 18.0, Height: 8
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Text: '80', X: 474.6673724463148, Y: 206.3399502162943, Width: 18.0, Height: 8
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Warning: Font Verdana not found. Using default font.
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  v = VARNA(structure=fold_dbn, sequence=seq)

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Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '....(((...)))(((((((((...((((.....)))).))))))))).(((.((((((((((((((...))))))..))))(((((.((((.....)))).)).)))..)))).)))', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_5.svg', '-title', 'DVL1, -47.8 ± 1.3\n kcal/mol, AUC: 0.722', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_5.svg


Warning: Font Verdana not found. Using default font.
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Text: 'A', X: 57.79718527771407, Y: 408.33813475721456, Width: 10.5, Height: 8
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Text: 'U', X: 75.29718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 92.79718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 92.79718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 92.79718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 93.73738641627122, Y: 350.8633868702931, Width: 10.5, Height: 8
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Text: 'A', X: 109.04718527771408, Y: 342.386308911788, Width: 10.5, Height: 8
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Text: 'A', X: 124.35698413915694, Y: 350.8633868702931, Width: 10.5, Height: 8
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Text: 'C', X: 125.29718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 125.29718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 125.29718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 142.79718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
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Text: 'U', X: 142.79718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 142.79718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 142.79718527771408, Y: 348.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 142.79718527771408, Y: 328.33813475721456, Width: 10.5, Height: 8
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Text: 'A', X: 142.79718527771408, Y: 308.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 142.79718527771408, Y: 288.33813475721456, Width: 10.5, Height: 8
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Text: 'U', X: 142.79718527771408, Y: 268.33813475721456, Width: 10.5, Height: 8
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Text: 'U', X: 142.79718527771408, Y: 248.3381347572146, Width: 10.5, Height: 8
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Text: 'C', X: 132.41750138137428, Y: 234.24869377414805, Width: 10.5, Height: 8
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Text: 'U', X: 132.41750311818873, Y: 216.74868848834174, Width: 10.5, Height: 8
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Text: 'U', X: 142.7971898111841, Y: 202.65924956557026, Width: 10.5, Height: 8
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Text: 'C', X: 159.51077987078855, Y: 197.47214128419213, Width: 10.5, Height: 8
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Text: 'G', X: 171.37327696356547, Y: 181.3699314133744, Width: 10.5, Height: 8
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Text: 'G', X: 195.0982711491193, Y: 149.16551167173907, Width: 10.5, Height: 8
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Text: 'G', X: 199.34728908706128, Y: 132.18915592615235, Width: 10.5, Height: 8
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Text: 'A', X: 214.34502528648116, Y: 123.17146682470968, Width: 10.5, Height: 8
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Text: 'C', X: 231.33158498612278, Y: 127.37950644051375, Width: 10.5, Height: 8
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Text: 'A', X: 240.3854391401286, Y: 142.3554382244015, Width: 10.5, Height: 8
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Text: 'U', X: 236.21840235049694, Y: 159.3521029628589, Width: 10.5, Height: 8
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Text: 'A', X: 209.40186509642115, Y: 184.54427931831924, Width: 10.5, Height: 8
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Text: 'U', X: 197.53936800364423, Y: 200.64648918913693, Width: 10.5, Height: 8
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Text: 'G', X: 185.6768709108673, Y: 216.74869905995465, Width: 10.5, Height: 8
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Text: 'U', X: 185.67686743723942, Y: 234.2486990599543, Width: 10.5, Height: 8
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Text: 'G', X: 175.29718527771408, Y: 248.3381347572146, Width: 10.5, Height: 8
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Text: 'A', X: 175.29718527771408, Y: 268.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 175.29718527771408, Y: 288.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 175.29718527771408, Y: 308.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 175.29718527771408, Y: 328.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 175.29718527771408, Y: 348.33813475721456, Width: 10.5, Height: 8
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Text: 'U', X: 175.29718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 175.29718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
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Text: 'G', X: 175.29718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
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Text: 'C', X: 192.79718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 210.29718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 210.29718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 210.29718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 203.61880812622482, Y: 352.16259832713183, Width: 10.5, Height: 8
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Text: 'G', X: 210.29718527771408, Y: 335.9870618970491, Width: 10.5, Height: 8
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Text: 'C', X: 210.29718527771408, Y: 315.987061897049, Width: 10.5, Height: 8
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Text: 'C', X: 210.29718527771408, Y: 295.987061897049, Width: 10.5, Height: 8
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Text: 'C', X: 210.29718527771408, Y: 275.987061897049, Width: 10.5, Height: 8
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Text: 'C', X: 200.7477885070921, Y: 266.4376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 180.7477885070921, Y: 266.4376651264271, Width: 10.5, Height: 8
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Text: 'G', X: 160.7477885070921, Y: 266.4376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 140.7477885070921, Y: 266.4376651264271, Width: 10.5, Height: 8
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Text: 'C', X: 124.62490577224918, Y: 273.11598181975, Width: 10.5, Height: 8
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Text: 'C', X: 110.48277014851826, Y: 287.25811744348096, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 96.3406345247873, Y: 301.4002530672119, Width: 10.5, Height: 8
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Text: 'G', X: 82.19849890105633, Y: 315.54238869094286, Width: 10.5, Height: 8
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Text: 'C', X: 68.05636327732537, Y: 329.6845243146738, Width: 10.5, Height: 8
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Text: 'C', X: 53.91422765359443, Y: 343.82665993840476, Width: 10.5, Height: 8
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Text: 'U', X: 40.89289232247392, Y: 355.51835006801923, Width: 10.5, Height: 8
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Text: 'G', X: 24.073030419839633, Y: 350.68688678359683, Width: 10.5, Height: 8
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Text: 'A', X: 19.24156713541725, Y: 333.8670248809625, Width: 10.5, Height: 8
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Text: 'G', X: 30.933257265031635, Y: 320.84568954984206, Width: 10.5, Height: 8
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Text: 'G', X: 45.0753928887626, Y: 306.7035539261111, Width: 10.5, Height: 8
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Text: 'U', X: 59.217528512493544, Y: 292.56141830238016, Width: 10.5, Height: 8
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Text: 'G', X: 73.3596641362245, Y: 278.4192826786491, Width: 10.5, Height: 8
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Text: 'G', X: 87.50179975995545, Y: 264.27714705491815, Width: 10.5, Height: 8
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Text: 'G', X: 101.6439353836864, Y: 250.13501143118722, Width: 10.5, Height: 8
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Text: 'G', X: 108.371856466315, Y: 233.96244830636797, Width: 10.5, Height: 8
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Text: 'A', X: 124.55470083155026, Y: 227.2592946925145, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 140.7477885070921, Y: 233.9376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 160.7477885070921, Y: 233.9376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 180.7477885070921, Y: 233.9376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 200.7477885070921, Y: 233.9376651264271, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 217.79714922020327, Y: 220.97964837211387, Width: 10.5, Height: 8
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Text: 'C', X: 223.15139863103738, Y: 201.70967138077881, Width: 10.5, Height: 8
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Text: 'G', X: 228.5056480418715, Y: 182.43969438944373, Width: 10.5, Height: 8
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Text: 'G', X: 229.4016071938888, Y: 164.96251507300065, Width: 10.5, Height: 8
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Text: 'U', X: 226.04597989739253, Y: 145.24603046120922, Width: 10.5, Height: 8
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Text: 'C', X: 216.74832704267868, Y: 130.42034154795942, Width: 10.5, Height: 8
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Text: 'C', X: 220.61802640803703, Y: 113.3536246058826, Width: 10.5, Height: 8
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Text: 'U', X: 217.2623300111203, Y: 93.63715175469247, Width: 10.5, Height: 8
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Text: 'G', X: 213.90663361420354, Y: 73.92067890350222, Width: 10.5, Height: 8
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Text: 'C', X: 210.5509372172868, Y: 54.20420605231209, Width: 10.5, Height: 8
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Text: 'C', X: 201.28090701577707, Y: 39.36111513765536, Width: 10.5, Height: 8
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Text: 'G', X: 205.20108065767636, Y: 22.305821342032118, Width: 10.5, Height: 8
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Text: 'C', X: 220.0217586781937, Y: 13.0, Width: 10.5, Height: 8
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Text: 'A', X: 237.08646265792504, Y: 16.879005790380916, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 246.42802095131114, Y: 31.677184613767736, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.59020560047082, Y: 48.75119940732236, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.94590199738758, Y: 68.4676722585125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 249.30159839430434, Y: 88.18414510970274, Width: 10.5, Height: 8
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Text: 'G', X: 252.6572947912211, Y: 107.90061796089287, Width: 10.5, Height: 8
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Text: 'A', X: 261.9550130882419, Y: 122.72635350653263, Width: 10.5, Height: 8
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Text: 'G', X: 258.0852673915536, Y: 139.79313610440272, Width: 10.5, Height: 8
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Text: 'C', X: 261.4408946880499, Y: 159.50962071619415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 268.0679711326922, Y: 175.70628264996515, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.819360652791, Y: 191.14034968204922, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.4651112419569, Y: 210.41032667338428, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 249.11086183112272, Y: 229.68030366471933, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 256.6695324035862, Y: 245.46372848878636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 254.30537533179694, Y: 262.80330060980214, Width: 10.5, Height: 8
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Text: 'G', X: 242.79718527771408, Y: 275.987061897049, Width: 10.5, Height: 8
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Text: 'G', X: 242.79718527771408, Y: 295.987061897049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.79718527771408, Y: 315.987061897049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 242.79718527771408, Y: 335.987061897049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 249.47556242920334, Y: 352.16259832713183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 242.79718527771408, Y: 368.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.79718527771408, Y: 388.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 242.79718527771408, Y: 408.33813475721456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 23.54718527771407, Y: 428.33813475721456, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 137.55810549633244, Y: 340.24926963265585, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 119.04718527771408, Y: 288.33813475721456, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 179.5237517051012, Y: 120.28783683830619, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 191.2957501714101, Y: 251.4994927944316, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 192.40504965398313, Y: 422.4802703809455, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_9.svg


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Warning: Font Verdana not found. Using default font.
Text: '70', X: -4.0, Y: 329.38608629563, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 156.9977885070921, Y: 213.9376651264271, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 193.7958571599301, Y: 96.99284815160922, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 260.7680712454945, Y: 84.82844871278598, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 264.26313076874385, Y: 271.0784224788945, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '118', X: 234.54718527771408, Y: 428.33813475721456, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'DVL1, -47.8 ± 1.3
 kcal/mol, AUC: 0.722', X: 77.65476913405473, Y: 441.1381347572146, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 291.26313076874385, 441.1381347572146)
Updated viewBox: -9.0 0.0 305.26313076874385 446.1381347572146
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_5.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_5.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CUAUGGGGAACCCCUGCGAGUUCUUCGUGGACAUCAUGUGACUCGUGGCGCAUGCCCCAGCCCUGCCUGAGGUGGGGAGCUGGCGGUCCUGCCGCAUGCAGAGCUCGCGUGGGCUUGC', '-structureDBN', '..........(((.((((((((((.((((....(((((.....)))))..))))(((((..(((.....)))))))).((..(((((...)))))..)))))))))))).))).....', '-o', '/disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_9.svg', '-title', 'DVL1, -48.1 ± 1.4\n kcal/mol, AUC: 0.674', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '2,4,5,6,7,8,15,16,18,20,21,22,24,25,27,28,29,30,34,37,38,39,40,43,45,46,47,48,50,53,54,58,60,64,65,68,69,71,72,73,74,75,76,77,79,81,82,83,85,86,87,90,91,94,97,98,101,103,105,107,109,110,111,112,113,115,116,117', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '67,104,12,13,14,80,23,55,56,57,92,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,17,26,93,31,36,100,102,41,106,108,49,114,52,118,59,62', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '66,3,70,9,10,11,78,19,84,88,89,95,32,33,96,35,99,42,44,51,61']
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Text: 'U', X: 93.83056256435843, Y: 129.12164603369916, Width: 10.5, Height: 8
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Text: 'C', X: 235.4139152979859, Y: 183.20345985707496, Width: 10.5, Height: 8
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Text: 'C', X: 235.41391529798594, Y: 163.20345985707496, Width: 10.5, Height: 8
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Text: 'C', X: 235.41391529798594, Y: 143.20345985707496, Width: 10.5, Height: 8
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Text: 'C', X: 235.41391529798594, Y: 123.20345985707496, Width: 10.5, Height: 8
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Text: 'A', X: 235.41391529798594, Y: 103.20345985707496, Width: 10.5, Height: 8
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Text: 'C', X: 235.4386984779268, Y: 70.82752781629785, Width: 10.5, Height: 8
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Text: 'C', X: 251.61126160274603, Y: 64.09960673366919, Width: 10.5, Height: 8
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Text: 'C', X: 265.753397226477, Y: 49.957471109938126, Width: 10.5, Height: 8
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Text: 'U', X: 325.691838724978, Y: 35.870591513266675, Width: 10.5, Height: 8
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Text: 'U', X: 267.9139152979859, Y: 103.20345985707496, Width: 10.5, Height: 8
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Text: 'G', X: 267.9139152979859, Y: 143.20345985707496, Width: 10.5, Height: 8
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Text: 'G', X: 267.9139152979859, Y: 163.20345985707496, Width: 10.5, Height: 8
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Text: 'G', X: 267.9139152979859, Y: 183.20345985707496, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 267.9139152979859, Y: 372.4139549589819, Width: 10.5, Height: 8
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Text: 'G', X: 267.9139152979859, Y: 392.4139549589819, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 267.9139152979859, Y: 412.4139549589819, Width: 10.5, Height: 8
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Text: 'G', X: 267.9139152979859, Y: 432.4139549589819, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'C', X: 355.4139152979859, Y: 504.76502781914746, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: '80', X: 316.7019061610054, Y: 198.42273966089084, Width: 18.0, Height: 8
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Text: '118', X: 347.1639152979859, Y: 524.7650278191475, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'DVL1, -48.1 ± 1.4
 kcal/mol, AUC: 0.674', X: 170.08782120769743, Y: 537.5650278191474, Width: 142.5, Height: 23
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Updated viewBox: -9.0 0.0 476.92565697326836 542.5650278191474
Updated SVG: /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_9.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/427e2464-06f4-4927-9e15-d15564bded11/final_image/DVL1_fold_final_9.svg
