Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
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Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_3.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 159.19 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 159.19 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 159.19 MB
read annotations - Elapsed time since the previous call: 0.10 seconds
read annotations - Current memory usage: 172.85 MB
Based on canonical annotations, the following gene is in your area of interest: HCFC1(-)
write fasta - Elapsed time since the previous call: 0.27 seconds
write fasta - Current memory usage: 172.85 MB
Length of region: 111 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.21 seconds
write dat - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fasta/HCFC1.fasta" "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" --SHAPE "HCFC1.dat"

fold - Elapsed time since the previous call: 0.17 seconds
fold - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_FE/HCFC1.txt" -sh "HCFC1.dat"

efn2 - Elapsed time since the previous call: 0.69 seconds
efn2 - Current memory usage: 176.34 MB
This region has 13 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 1 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 2 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 3 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 4 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 5 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 6 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 7 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 8 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 9 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp9.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 10 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp10.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 11 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp11.dbn"

ct2dot - Elapsed time since the previous call: 0.03 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 12 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp12.dbn"

ct2dot - Elapsed time since the previous call: 0.03 seconds
ct2dot - Current memory usage: 176.34 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/ct/HCFC1.ct" 13 "/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/fold_dbn/HCFC1_temp13.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.34 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...(((((...(((((...))))).((((((....)))))).......((........))((((......)))).(((.(((.((((....)))).)))))).)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_3.svg', '-title', 'HCFC1, -34.2 ± 1.3\n kcal/mol, AUC: 0.758', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
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Text: 'C', X: 281.00686827081273, Y: 185.98080538004342, Width: 10.5, Height: 8
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Text: 'C', X: 336.64584304843714, Y: 294.93122097075127, Width: 10.5, Height: 8
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Text: 'G', X: 343.4247929401664, Y: 313.7473267943648, Width: 10.5, Height: 8
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Text: 'A', X: 350.20374283189574, Y: 332.5634326179783, Width: 10.5, Height: 8
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Text: 'G', X: 356.98269272362506, Y: 351.3795384415919, Width: 10.5, Height: 8
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Text: 'U', X: 366.12971579833413, Y: 366.298761627379, Width: 10.5, Height: 8
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Text: 'C', X: 360.33494466159743, Y: 382.8115408928277, Width: 10.5, Height: 8
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Text: 'U', X: 343.87081842286443, Y: 388.7431341688078, Width: 10.5, Height: 8
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Text: 'G', X: 328.8762076579434, Y: 379.72022446045423, Width: 10.5, Height: 8
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Text: 'U', X: 326.4065207602531, Y: 362.395332015652, Width: 10.5, Height: 8
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Text: 'U', X: 319.6275708685238, Y: 343.5792261920385, Width: 10.5, Height: 8
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Text: 'C', X: 312.84862097679445, Y: 324.76312036842495, Width: 10.5, Height: 8
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Text: 'G', X: 306.0696710850651, Y: 305.94701454481145, Width: 10.5, Height: 8
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Text: 'A', X: 294.3039473594771, Y: 292.99256568686565, Width: 10.5, Height: 8
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Text: 'A', X: 295.10439002319833, Y: 275.5108812273493, Width: 10.5, Height: 8
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Text: 'C', X: 288.32550607639064, Y: 256.694751645639, Width: 10.5, Height: 8
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Text: 'C', X: 281.546622129583, Y: 237.87862206392867, Width: 10.5, Height: 8
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Text: 'C', X: 272.1680335059809, Y: 223.10391139233718, Width: 10.5, Height: 8
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Text: 'G', X: 258.0258978822499, Y: 208.96177576860623, Width: 10.5, Height: 8
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Text: 'C', X: 243.88376225851897, Y: 194.81964014487528, Width: 10.5, Height: 8
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Text: 'C', X: 229.16171111750464, Y: 202.70999523344648, Width: 10.5, Height: 8
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Text: 'C', X: 213.17232533361974, Y: 207.54073383913436, Width: 10.5, Height: 8
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Text: 'U', X: 213.17232533361974, Y: 227.54073383913436, Width: 10.5, Height: 8
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Text: 'G', X: 213.17232533361974, Y: 247.54073383913436, Width: 10.5, Height: 8
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Text: 'C', X: 213.17232533361974, Y: 267.54073383913436, Width: 10.5, Height: 8
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Text: 'G', X: 213.17232533361974, Y: 287.54073383913436, Width: 10.5, Height: 8
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Text: 'A', X: 230.67232533361974, Y: 287.54073383913436, Width: 10.5, Height: 8
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Text: 'G', X: 248.1723253336197, Y: 287.54073383913436, Width: 10.5, Height: 8
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Text: 'A', X: 265.6723253336197, Y: 287.54073383913436, Width: 10.5, Height: 8
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Text: '1', X: 128.92232533361974, Y: 307.54073383913436, Width: 9.0, Height: 8
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Text: '10', X: 131.81371992926827, Y: 209.15214867078672, Width: 18.0, Height: 8
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Text: '20', X: 22.220816264808477, Y: 142.76975385100394, Width: 18.0, Height: 8
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Text: '30', X: 32.68993731906302, Y: 79.94528209216543, Width: 18.0, Height: 8
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Text: '40', X: 119.83082943778803, Y: 44.41058185770828, Width: 18.0, Height: 8
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Text: '50', X: 266.4254421241264, Y: 33.9418346778765, Width: 18.0, Height: 8
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Text: '60', X: 289.09905570184765, Y: 84.0703425092911, Width: 18.0, Height: 8
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Text: '70', X: 347.3568173986297, Y: 169.6514662504278, Width: 18.0, Height: 8
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Text: '80', X: 326.33193714245135, Y: 218.06119902512148, Width: 18.0, Height: 8
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Text: '90', X: 338.16492391941034, Y: 408.64726631998076, Width: 18.0, Height: 8
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Text: '100', X: 249.77589788224992, Y: 237.24604701606813, Width: 27.0, Height: 8
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Text: '110', X: 239.9223253336197, Y: 307.54073383913436, Width: 27.0, Height: 8
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Text: '111', X: 257.4223253336197, Y: 307.54073383913436, Width: 27.0, Height: 8
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Text: 'HCFC1, -34.2 ± 1.3
 kcal/mol, AUC: 0.758', X: 127.97959300279786, Y: 421.44726631998077, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 393.70918600559577, 421.44726631998077)
Updated viewBox: -0.25 0.0 398.95918600559577 426.44726631998077
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_3.svg/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_7.svg


Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_3.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...(((((...(((((...))))).((((((....))))))......(((....((((......))))...))).(((.(((.((((....)))).)))))).)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_7.svg', '-title', 'HCFC1, -33.2 ± 1.2\n kcal/mol, AUC: 0.692', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
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Text: 'G', X: 148.6729406516021, Y: 342.40217586675254, Width: 10.5, Height: 8
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Text: 'U', X: 166.1729406516021, Y: 342.40217586675254, Width: 10.5, Height: 8
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Text: 'G', X: 166.1729406516021, Y: 322.40217586675254, Width: 10.5, Height: 8
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Text: 'C', X: 166.1729406516021, Y: 302.40217586675254, Width: 10.5, Height: 8
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Text: 'A', X: 166.1729406516021, Y: 282.40217586675254, Width: 10.5, Height: 8
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Text: 'G', X: 166.1729406516021, Y: 262.40217586675254, Width: 10.5, Height: 8
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Text: 'U', X: 146.90190493244265, Y: 255.0723402098439, Width: 10.5, Height: 8
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Text: 'U', X: 130.42303291591173, Y: 242.68096879626728, Width: 10.5, Height: 8
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Text: 'C', X: 118.03166150233517, Y: 226.2020967797364, Width: 10.5, Height: 8
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Text: 'G', X: 110.70182584542653, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'U', X: 90.70182584542653, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'C', X: 70.70182584542653, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'U', X: 50.70182584542653, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'G', X: 30.701825845426526, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'U', X: 13.227077958505049, Y: 205.9908599220198, Width: 10.5, Height: 8
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Text: 'G', X: 4.75, Y: 190.681061060577, Width: 10.5, Height: 8
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Text: 'A', X: 13.227077958505049, Y: 175.3712621991341, Width: 10.5, Height: 8
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Text: 'C', X: 30.701825845426526, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'A', X: 50.70182584542653, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'G', X: 70.70182584542653, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'A', X: 90.70182584542653, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'C', X: 110.70182584542653, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'A', X: 118.35439957367493, Y: 154.58116004704823, Width: 10.5, Height: 8
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Text: 'G', X: 131.36871005553712, Y: 137.75236990649273, Width: 10.5, Height: 8
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Text: 'G', X: 121.00781861899938, Y: 120.64529743221249, Width: 10.5, Height: 8
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Text: 'A', X: 110.64692718246164, Y: 103.53822495793213, Width: 10.5, Height: 8
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Text: 'G', X: 100.2860357459239, Y: 86.43115248365177, Width: 10.5, Height: 8
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Text: 'G', X: 89.92514430938616, Y: 69.32408000937153, Width: 10.5, Height: 8
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Text: 'C', X: 79.56425287284839, Y: 52.21700753509117, Width: 10.5, Height: 8
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Text: 'A', X: 67.65138791466751, Y: 39.39769007725704, Width: 10.5, Height: 8
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Text: 'G', X: 70.07146788568087, Y: 22.065798532174995, Width: 10.5, Height: 8
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Text: 'C', X: 85.0401868880071, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 101.52122632081998, Y: 18.88443632055396, Width: 10.5, Height: 8
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Text: 'G', X: 107.36324564355391, Y: 35.380558950717386, Width: 10.5, Height: 8
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Text: 'C', X: 117.72413708009165, Y: 52.487631424997744, Width: 10.5, Height: 8
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Text: 'U', X: 128.0850285166294, Y: 69.59470389927799, Width: 10.5, Height: 8
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Text: 'U', X: 138.44591995316713, Y: 86.70177637355835, Width: 10.5, Height: 8
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Text: 'C', X: 148.80681138970488, Y: 103.80884884783859, Width: 10.5, Height: 8
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Text: 'U', X: 159.1677028262426, Y: 120.91592132211895, Width: 10.5, Height: 8
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Text: 'C', X: 176.31017204282946, Y: 117.39658201503676, Width: 10.5, Height: 8
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Text: 'U', X: 193.79880287731754, Y: 118.02728918559342, Width: 10.5, Height: 8
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Text: 'U', X: 210.6432269496808, Y: 122.77232634776499, Width: 10.5, Height: 8
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Text: 'G', X: 225.88955683791926, Y: 131.36298551566404, Width: 10.5, Height: 8
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Text: 'U', X: 238.67440402547822, Y: 143.31278394035564, Width: 10.5, Height: 8
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Text: 'G', X: 248.27377196180714, Y: 157.94501327231262, Width: 10.5, Height: 8
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Text: 'A', X: 254.14405545777765, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'C', X: 274.14405545777765, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'C', X: 294.14405545777765, Y: 174.431061060577, Width: 10.5, Height: 8
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Text: 'U', X: 305.5876624799578, Y: 161.19112267425942, Width: 10.5, Height: 8
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Text: 'C', X: 321.9177553723524, Y: 154.89984488057246, Width: 10.5, Height: 8
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Text: 'G', X: 339.28650402189396, Y: 157.0396300334852, Width: 10.5, Height: 8
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Text: 'A', X: 353.6013417469113, Y: 167.10628444585052, Width: 10.5, Height: 8
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Text: 'C', X: 361.4892893472894, Y: 182.72782063168268, Width: 10.5, Height: 8
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Text: 'U', X: 380.8912617290164, Y: 187.58204226843395, Width: 10.5, Height: 8
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Text: 'G', X: 400.29323411074336, Y: 192.43626390518511, Width: 10.5, Height: 8
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Text: 'U', X: 419.69520649247033, Y: 197.29048554193628, Width: 10.5, Height: 8
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Text: 'G', X: 436.49002115396286, Y: 192.37282834514144, Width: 10.5, Height: 8
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Text: 'G', X: 452.50155925208037, Y: 199.43539158744983, Width: 10.5, Height: 8
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Text: 'G', X: 460.1938314079887, Y: 215.1541097571515, Width: 10.5, Height: 8
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Text: 'C', X: 455.9463933576329, Y: 232.1308120820279, Width: 10.5, Height: 8
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Text: 'C', X: 441.7583439907381, Y: 242.3752450571431, Width: 10.5, Height: 8
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Text: 'A', X: 424.30742961000726, Y: 241.06576458937144, Width: 10.5, Height: 8
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Text: 'G', X: 411.80709633274967, Y: 228.81869066224266, Width: 10.5, Height: 8
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Text: 'C', X: 392.4051239510227, Y: 223.96446902549144, Width: 10.5, Height: 8
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Text: 'A', X: 373.0031515692957, Y: 219.11024738874028, Width: 10.5, Height: 8
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Text: 'G', X: 353.60117918756873, Y: 214.25602575198906, Width: 10.5, Height: 8
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Text: 'A', X: 339.28633004211565, Y: 224.32255911471725, Width: 10.5, Height: 8
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Text: 'A', X: 321.9176320085845, Y: 226.4622620426985, Width: 10.5, Height: 8
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Text: 'U', X: 254.14405545777765, Y: 206.931061060577, Width: 10.5, Height: 8
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Text: 'A', X: 250.36409427604372, Y: 218.82320833509465, Width: 10.5, Height: 8
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Text: 'G', X: 289.8860125323696, Y: 284.929328394055, Width: 10.5, Height: 8
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Text: 'G', X: 296.66489647917723, Y: 303.7454579757653, Width: 10.5, Height: 8
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Text: 'U', X: 303.44378042598487, Y: 322.5615875574756, Width: 10.5, Height: 8
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Text: 'C', X: 315.20943151339526, Y: 335.5160020501706, Width: 10.5, Height: 8
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Text: 'C', X: 314.40902288094446, Y: 352.99761371444004, Width: 10.5, Height: 8
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Text: 'G', X: 321.1879727726738, Y: 371.8137195380536, Width: 10.5, Height: 8
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Text: 'A', X: 327.9669226644031, Y: 390.6298253616671, Width: 10.5, Height: 8
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Text: 'G', X: 334.74587255613244, Y: 409.44593118528064, Width: 10.5, Height: 8
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Text: 'U', X: 343.8928956308415, Y: 424.3651543710678, Width: 10.5, Height: 8
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Text: 'C', X: 338.0981244941048, Y: 440.87793363651645, Width: 10.5, Height: 8
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Text: 'U', X: 321.6339982553718, Y: 446.80952691249655, Width: 10.5, Height: 8
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Text: 'G', X: 306.63938749045076, Y: 437.786617204143, Width: 10.5, Height: 8
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Text: 'U', X: 304.1697005927605, Y: 420.46172475934077, Width: 10.5, Height: 8
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Text: 'U', X: 297.39075070103115, Y: 401.64561893572727, Width: 10.5, Height: 8
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Text: 'C', X: 290.6118008093018, Y: 382.8295131121137, Width: 10.5, Height: 8
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Text: 'G', X: 283.8328509175725, Y: 364.0134072885002, Width: 10.5, Height: 8
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Text: 'A', X: 272.0671271919844, Y: 351.0589584305544, Width: 10.5, Height: 8
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Text: 'A', X: 272.8675698557057, Y: 333.57727397103804, Width: 10.5, Height: 8
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Text: 'C', X: 266.088685908898, Y: 314.76114438932774, Width: 10.5, Height: 8
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Text: 'C', X: 259.3098019620903, Y: 295.94501480761744, Width: 10.5, Height: 8
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Text: 'C', X: 249.9312133384882, Y: 281.17030413602595, Width: 10.5, Height: 8
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Text: 'G', X: 235.7890777147573, Y: 267.028168512295, Width: 10.5, Height: 8
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Text: 'C', X: 221.64694209102635, Y: 252.88603288856405, Width: 10.5, Height: 8
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Text: 'C', X: 210.56508792611976, Y: 258.62221468501855, Width: 10.5, Height: 8
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Text: 'C', X: 198.6729406516021, Y: 262.40217586675254, Width: 10.5, Height: 8
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Text: 'U', X: 198.6729406516021, Y: 282.40217586675254, Width: 10.5, Height: 8
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Text: 'G', X: 198.6729406516021, Y: 302.40217586675254, Width: 10.5, Height: 8
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Text: 'C', X: 198.6729406516021, Y: 322.40217586675254, Width: 10.5, Height: 8
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Text: 'G', X: 198.6729406516021, Y: 342.40217586675254, Width: 10.5, Height: 8
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Text: 'A', X: 216.1729406516021, Y: 342.40217586675254, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 233.6729406516021, Y: 342.40217586675254, Width: 10.5, Height: 8
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Text: 'A', X: 251.17294065160206, Y: 342.40217586675254, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 114.42294065160209, Y: 362.40217586675254, Width: 9.0, Height: 8
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Text: '10', X: 112.53089729218078, Y: 256.82310441999823, Width: 18.0, Height: 8
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Text: '20', X: 21.43016065924889, Y: 155.20838659598303, Width: 18.0, Height: 8
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Text: '30', X: 69.06807183510584, Y: 79.68497144590924, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_4.svg


Text: '40', X: 162.1638838639852, Y: 93.44795741130088, Width: 18.0, Height: 8
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Text: '50', X: 284.3606466751751, Y: 155.36281576998948, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 462.6103055233536, Y: 185.015434868081, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 315.72217168735045, Y: 246.3121921135393, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 304.0951169749587, Y: 276.12759176881025, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 315.9281037519177, Y: 466.7136590636695, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 227.53907771475724, Y: 295.3124397597569, Width: 27.0, Height: 8
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Text: '110', X: 225.4229406516021, Y: 362.40217586675254, Width: 27.0, Height: 8
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Text: '111', X: 242.92294065160206, Y: 362.40217586675254, Width: 27.0, Height: 8
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Text: 'HCFC1, -33.2 ± 1.2
 kcal/mol, AUC: 0.692', X: 166.47191570399434, Y: 479.51365906366954, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 480.6103055233536, 479.51365906366954)
Updated viewBox: -0.25 0.0 485.8603055233536 484.51365906366954
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_7.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...(((((...(((((...)))))..((((..((..........))..))))........((((......)))).(((.(((.((((....)))).)))))).)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_4.svg', '-title', 'HCFC1, -32.9 ± 1.2\n kcal/mol, AUC: 0.753', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
Warning: Font Verdana not found. Using default font.
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Text: 'A', X: 158.296529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
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Text: 'G', X: 175.796529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
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Text: 'U', X: 193.296529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
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Text: 'G', X: 193.296529104162, Y: 364.99969465809926, Width: 10.5, Height: 8
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Text: 'C', X: 193.296529104162, Y: 344.99969465809926, Width: 10.5, Height: 8
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Text: 'A', X: 193.296529104162, Y: 324.99969465809926, Width: 10.5, Height: 8
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Text: 'G', X: 193.296529104162, Y: 304.99969465809926, Width: 10.5, Height: 8
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Text: 'U', X: 175.54756857135604, Y: 299.23337210927065, Width: 10.5, Height: 8
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Text: 'U', X: 159.5662225354975, Y: 289.5963261607249, Width: 10.5, Height: 8
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Text: 'C', X: 146.18336519070948, Y: 276.5895892516734, Width: 10.5, Height: 8
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Text: 'G', X: 136.0947746514551, Y: 260.88938490066255, Width: 10.5, Height: 8
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Text: 'U', X: 116.75170758678235, Y: 265.97325709925013, Width: 10.5, Height: 8
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Text: 'C', X: 97.40864052210958, Y: 271.0571292978377, Width: 10.5, Height: 8
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Text: 'U', X: 78.06557345743681, Y: 276.1410014964253, Width: 10.5, Height: 8
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Text: 'G', X: 58.722506392764046, Y: 281.2248736950129, Width: 10.5, Height: 8
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Text: 'U', X: 41.582752255545984, Y: 284.7575242591256, Width: 10.5, Height: 8
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Text: 'G', X: 29.492464842471975, Y: 272.1054200008738, Width: 10.5, Height: 8
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Text: 'A', X: 33.79944617578025, Y: 255.1436776467716, Width: 10.5, Height: 8
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Text: 'C', X: 50.461214070059214, Y: 249.79238971491964, Width: 10.5, Height: 8
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Text: 'A', X: 69.80428113473198, Y: 244.70851751633205, Width: 10.5, Height: 8
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Text: 'G', X: 89.14734819940475, Y: 239.62464531774447, Width: 10.5, Height: 8
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Text: 'A', X: 108.49041526407751, Y: 234.54077311915688, Width: 10.5, Height: 8
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Text: 'C', X: 127.83348232875028, Y: 229.45690092056935, Width: 10.5, Height: 8
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Text: 'A', X: 128.7075629117047, Y: 211.9787436053801, Width: 10.5, Height: 8
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Text: 'G', X: 133.27732997638026, Y: 195.08592770705792, Width: 10.5, Height: 8
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Text: 'G', X: 141.33386909498316, Y: 179.5507361269576, Width: 10.5, Height: 8
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Text: 'A', X: 127.1917334712522, Y: 165.40860050322664, Width: 10.5, Height: 8
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Text: 'G', X: 113.04959784752123, Y: 151.2664648794957, Width: 10.5, Height: 8
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Text: 'G', X: 98.90746222379028, Y: 137.12432925576474, Width: 10.5, Height: 8
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Text: 'C', X: 81.6051797471091, Y: 134.5011356996909, Width: 10.5, Height: 8
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Text: 'A', X: 69.2308085845915, Y: 122.1267645371733, Width: 10.5, Height: 8
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Text: 'G', X: 66.60761502851767, Y: 104.82448206049213, Width: 10.5, Height: 8
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Text: 'C', X: 52.46547940478672, Y: 90.68234643676118, Width: 10.5, Height: 8
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Text: 'U', X: 35.01859038300597, Y: 92.04439495652144, Width: 10.5, Height: 8
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Text: 'G', X: 18.961410152949156, Y: 85.08622883548162, Width: 10.5, Height: 8
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Text: 'C', X: 8.02483926689473, Y: 71.42458435310613, Width: 10.5, Height: 8
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Text: 'U', X: 4.75, Y: 54.233757133786014, Width: 10.5, Height: 8
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Text: 'U', X: 9.897804259239138, Y: 37.5080516474074, Width: 10.5, Height: 8
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Text: 'C', X: 22.272155003995692, Y: 25.1337009026509, Width: 10.5, Height: 8
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Text: 'U', X: 38.99786049037425, Y: 19.98589664341165, Width: 10.5, Height: 8
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Text: 'C', X: 56.18868770969436, Y: 23.260735910306323, Width: 10.5, Height: 8
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Text: 'U', X: 69.85033219206991, Y: 34.19730679636069, Width: 10.5, Height: 8
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Text: 'U', X: 76.8084983131098, Y: 50.25448702641762, Width: 10.5, Height: 8
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Text: 'G', X: 75.44644979334953, Y: 67.70137604819837, Width: 10.5, Height: 8
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Text: 'U', X: 89.58858541708045, Y: 81.84351167192932, Width: 10.5, Height: 8
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Text: 'G', X: 106.89086789376162, Y: 84.46670522800315, Width: 10.5, Height: 8
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Text: 'A', X: 119.26523905627926, Y: 96.84107639052075, Width: 10.5, Height: 8
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Text: 'C', X: 121.88843261235309, Y: 114.14335886720193, Width: 10.5, Height: 8
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Text: 'C', X: 136.03056823608404, Y: 128.28549449093288, Width: 10.5, Height: 8
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Text: 'U', X: 150.172703859815, Y: 142.42763011466383, Width: 10.5, Height: 8
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Text: 'C', X: 164.31483948354594, Y: 156.56976573839478, Width: 10.5, Height: 8
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Text: 'G', X: 180.09118132054428, Y: 148.41976983246224, Width: 10.5, Height: 8
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Text: 'A', X: 197.25398398375802, Y: 143.86415793414102, Width: 10.5, Height: 8
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Text: 'C', X: 214.99539574672252, Y: 143.1173623252315, Width: 10.5, Height: 8
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Text: 'U', X: 232.48032979967394, Y: 146.21453461434982, Width: 10.5, Height: 8
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Text: 'G', X: 248.88577171781372, Y: 153.00989115356737, Width: 10.5, Height: 8
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Text: 'U', X: 263.4395186833939, Y: 163.18357506287026, Width: 10.5, Height: 8
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Text: 'G', X: 275.4565270095886, Y: 176.25671186750554, Width: 10.5, Height: 8
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Text: 'G', X: 284.37115709115653, Y: 191.61395008058753, Width: 10.5, Height: 8
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Text: 'G', X: 289.7637980146876, Y: 208.53242574757365, Width: 10.5, Height: 8
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Text: 'C', X: 309.7637980146876, Y: 208.53242574757365, Width: 10.5, Height: 8
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Text: 'C', X: 329.7637980146876, Y: 208.53242574757365, Width: 10.5, Height: 8
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Text: 'A', X: 349.7637980146876, Y: 208.53242574757365, Width: 10.5, Height: 8
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Text: 'G', X: 364.8628546272724, Y: 199.6855256560708, Width: 10.5, Height: 8
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Text: 'C', X: 382.10978799079146, Y: 202.65073077096673, Width: 10.5, Height: 8
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Text: 'A', X: 393.38715767894246, Y: 216.03243786445245, Width: 10.5, Height: 8
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Text: 'G', X: 393.38715767894246, Y: 233.53241363069486, Width: 10.5, Height: 8
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Text: 'A', X: 382.10978799079146, Y: 246.91412072418058, Width: 10.5, Height: 8
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Text: 'A', X: 364.8628546272723, Y: 249.8793258390765, Width: 10.5, Height: 8
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Text: 'U', X: 349.7637980146876, Y: 241.03242574757365, Width: 10.5, Height: 8
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Text: 'G', X: 329.7637980146876, Y: 241.03242574757365, Width: 10.5, Height: 8
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Text: 'G', X: 309.7637980146876, Y: 241.03242574757365, Width: 10.5, Height: 8
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Text: 'U', X: 289.7637980146876, Y: 241.03242574757365, Width: 10.5, Height: 8
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Text: 'A', X: 285.16296602824326, Y: 256.1037794598578, Width: 10.5, Height: 8
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Text: 'G', X: 277.7591891133409, Y: 270.0141153681897, Width: 10.5, Height: 8
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Text: 'C', X: 291.90132473707183, Y: 284.1562509919207, Width: 10.5, Height: 8
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Text: 'U', X: 320.81820943968717, Y: 307.6770357445681, Width: 10.5, Height: 8
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Text: 'G', X: 323.0172891661213, Y: 325.0383812622435, Width: 10.5, Height: 8
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Text: 'G', X: 329.79617311292895, Y: 343.8545108439538, Width: 10.5, Height: 8
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Text: 'U', X: 336.57505705973665, Y: 362.6706404256641, Width: 10.5, Height: 8
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Text: 'C', X: 348.340708147147, Y: 375.62505491835907, Width: 10.5, Height: 8
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Text: 'C', X: 347.54029951469624, Y: 393.1066665826286, Width: 10.5, Height: 8
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Text: 'G', X: 354.31924940642557, Y: 411.9227724062421, Width: 10.5, Height: 8
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Text: 'A', X: 361.0981992981549, Y: 430.73887822985563, Width: 10.5, Height: 8
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Text: 'G', X: 367.8771491898842, Y: 449.5549840534691, Width: 10.5, Height: 8
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Text: 'U', X: 377.02417226459323, Y: 464.47420723925626, Width: 10.5, Height: 8
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Text: 'C', X: 371.22940112785653, Y: 480.98698650470493, Width: 10.5, Height: 8
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Text: 'U', X: 354.7652748891236, Y: 486.91857978068504, Width: 10.5, Height: 8
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Text: 'G', X: 339.77066412420254, Y: 477.8956700723315, Width: 10.5, Height: 8
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Text: 'U', X: 337.30097722651226, Y: 460.5707776275293, Width: 10.5, Height: 8
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Text: 'U', X: 330.52202733478293, Y: 441.75467180391576, Width: 10.5, Height: 8
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Text: 'C', X: 323.7430774430536, Y: 422.93856598030226, Width: 10.5, Height: 8
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Text: 'G', X: 316.9641275513243, Y: 404.1224601566887, Width: 10.5, Height: 8
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Text: 'A', X: 305.19840382573614, Y: 391.1680112987429, Width: 10.5, Height: 8
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Text: 'A', X: 305.99884648945743, Y: 373.6863268392266, Width: 10.5, Height: 8
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Text: 'C', X: 299.2199625426498, Y: 354.8701972575163, Width: 10.5, Height: 8
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Text: 'C', X: 292.4410785958421, Y: 336.054067675806, Width: 10.5, Height: 8
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Text: 'C', X: 283.06248997224, Y: 321.27935700421443, Width: 10.5, Height: 8
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Text: 'G', X: 268.920354348509, Y: 307.1372213804835, Width: 10.5, Height: 8
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Text: 'C', X: 254.77821872477807, Y: 292.99508575675253, Width: 10.5, Height: 8
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Text: 'C', X: 240.86788281644613, Y: 300.3988626716549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_8.svg


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Text: 'G', X: 225.796529104162, Y: 344.99969465809926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 225.796529104162, Y: 364.99969465809926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.796529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 243.296529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 260.796529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
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Text: 'A', X: 278.296529104162, Y: 384.99969465809926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 141.546529104162, Y: 404.99969465809926, Width: 9.0, Height: 8
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Text: '111', X: 270.046529104162, Y: 404.99969465809926, Width: 27.0, Height: 8
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Text: 'HCFC1, -32.9 ± 1.2
 kcal/mol, AUC: 0.753', X: 133.06857883947123, Y: 519.622711931858, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 403.88715767894246, 519.622711931858)
Updated viewBox: -0.25 -5.0 409.13715767894246 529.622711931858
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_4.svg
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Text: 'C', X: 349.51460312844887, Y: 382.46005626313354, Width: 10.5, Height: 8
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Text: 'G', X: 289.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
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Text: 'U', X: 269.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
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Text: 'C', X: 249.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
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Text: 'U', X: 229.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
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Text: 'G', X: 209.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
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Text: 'U', X: 189.5157684490166, Y: 274.9612215837012, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_12.svg


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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Text: 'HCFC1, -33.5 ± 1.3
 kcal/mol, AUC: 0.688', X: 137.62765632102463, Y: 542.3897544872142, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 417.99099896546585, 542.3897544872142)
Updated viewBox: -0.25 -5.0 423.24099896546585 552.3897544872142
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_8.svg
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Text: 'G', X: 138.42726644850836, Y: 307.90925300444576, Width: 10.5, Height: 8
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
Text: 'G', X: 100.11170869472062, Y: 194.73285776542124, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 81.13989402208051, Y: 188.40275128709115, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 62.16807934944035, Y: 182.0726448087611, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
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Warning: Font Verdana not found. Using default font.
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Text: 'U', X: 7.945644751976602, Y: 162.98971502400613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 4.75, Y: 145.78394138514946, Width: 10.5, Height: 8
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Text: 'A', X: 17.636910447451555, Y: 133.94424835653703, Width: 10.5, Height: 8
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Text: 'C', X: 34.510873031446465, Y: 138.58323300906076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 53.48268770408657, Y: 144.91333948739086, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.45450237672674, Y: 151.2434459657209, Width: 10.5, Height: 8
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Text: 'A', X: 91.42631704936684, Y: 157.57355244405093, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 110.39813172200701, Y: 163.90365892238103, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 122.77250320783074, Y: 151.52929306667622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 138.42726644850836, Y: 143.7076316141249, Width: 10.5, Height: 8
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Text: 'G', X: 138.42726644850836, Y: 123.70763161412489, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 138.42726644850836, Y: 103.70763161412492, Width: 10.5, Height: 8
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Text: 'G', X: 138.42726644850836, Y: 83.70763161412492, Width: 10.5, Height: 8
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Text: 'G', X: 138.42726644850836, Y: 63.70763161412492, Width: 10.5, Height: 8
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Text: 'C', X: 138.42726644850836, Y: 43.70763161412492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 134.87853206126928, Y: 26.57118694653377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 145.92724856857538, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 163.42728432844135, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.47600083574747, Y: 26.57118694653377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 170.92726644850836, Y: 43.70763161412492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 170.92726644850836, Y: 63.70763161412492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 170.92726644850836, Y: 83.70763161412492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 170.92726644850836, Y: 103.70763161412492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 170.92726644850836, Y: 123.70763161412489, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 170.92726644850836, Y: 143.7076316141249, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 186.58203976230016, Y: 151.52930032472895, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 198.95641569111743, Y: 163.90367906860772, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 206.77808084039876, Y: 179.5584541617595, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.2428242022961, Y: 196.88402685314938, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 228.2146388749362, Y: 203.21413333147947, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 247.18645354757632, Y: 209.5442398098095, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 262.7542116205129, Y: 201.55079240631753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 280.22622008413447, Y: 202.54034435392234, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 294.7918792546328, Y: 212.24044052554606, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 302.4407998544415, Y: 227.98033590218998, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.41261123602726, Y: 234.31045224405372, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 340.38442261761315, Y: 240.6405685859174, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 359.356233999199, Y: 246.9706849277811, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 378.75774179760566, Y: 250.1220345114322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 389.7133999175376, Y: 237.23133986096616, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 405.3429857465322, Y: 230.75735343632226, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 422.2049034970471, Y: 232.12563088890667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 436.34703912077805, Y: 217.98349526517572, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 450.489174744509, Y: 203.84135964144477, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 464.63131036823995, Y: 189.69922401771382, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 478.7734459919709, Y: 175.55708839398287, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 492.91558161570185, Y: 161.41495277025192, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 507.0577172394328, Y: 147.27281714652096, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 516.4364268737976, Y: 132.4980296605547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 523.215441993369, Y: 113.6819473369512, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 515.5064496210452, Y: 97.97141225072073, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 516.749836187434, Y: 80.51565486415188, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 526.607842961256, Y: 66.05643017748537, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 542.4025997202692, Y: 58.52150250591251, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 559.8435526270754, Y: 59.9576911407363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 574.1929682322831, Y: 69.97486378980489, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 581.5529112192112, Y: 85.8519137463112, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 579.924095868719, Y: 103.27593270423904, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 569.748980400271, Y: 117.51378722294996, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 553.7915757692247, Y: 124.69784690625485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 547.0125606496531, Y: 143.5139292298583, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 544.8133982995871, Y: 160.8751989114816, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 530.0386876279956, Y: 170.25378753508377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 515.8965520042647, Y: 184.39592315881472, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 501.7544163805337, Y: 198.53805878254568, Width: 10.5, Height: 8
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Text: 'U', X: 487.61228075680276, Y: 212.68019440627663, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_10.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 473.4701451330718, Y: 226.82233003000758, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 459.32800950934086, Y: 240.9644656537385, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 445.1858738856099, Y: 255.10660127746945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 446.4033482303358, Y: 272.8558224898985, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 438.98444656353433, Y: 289.02607281220764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 424.7358642625756, Y: 299.67947601684665, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 407.1275014465583, Y: 302.2216515354345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 390.4474521126181, Y: 296.0335135565972, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 378.75774179760566, Y: 282.62203451143216, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 362.8652309516112, Y: 286.6663516469466, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 349.0697949436705, Y: 277.7998784228581, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 330.09798356208466, Y: 271.4697620809944, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 311.12617218049877, Y: 265.13964573913074, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 292.154360798913, Y: 258.809529397267, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 276.58660705137567, Y: 266.80296690912877, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 259.1146070689812, Y: 265.8134131636424, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.54895360091166, Y: 256.1133235224012, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 236.90003052029, Y: 240.37343865284973, Width: 10.5, Height: 8
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Text: 'G', X: 217.92821584764988, Y: 234.0433321745197, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 198.95640117500974, Y: 227.7132256961896, Width: 10.5, Height: 8
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Text: 'C', X: 186.58202968918602, Y: 240.0875915518944, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 170.92726644850836, Y: 247.90925300444576, Width: 10.5, Height: 8
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Text: 'U', X: 170.92726644850836, Y: 267.90925300444576, Width: 10.5, Height: 8
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Text: 'G', X: 170.92726644850836, Y: 287.90925300444576, Width: 10.5, Height: 8
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Text: 'C', X: 170.92726644850836, Y: 307.90925300444576, Width: 10.5, Height: 8
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Text: 'G', X: 170.92726644850836, Y: 327.90925300444576, Width: 10.5, Height: 8
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Text: 'A', X: 188.42726644850836, Y: 327.90925300444576, Width: 10.5, Height: 8
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Text: 'G', X: 205.92726644850836, Y: 327.90925300444576, Width: 10.5, Height: 8
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Text: 'A', X: 223.42726644850836, Y: 327.90925300444576, Width: 10.5, Height: 8
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Text: '20', X: 31.607151409577796, Y: 118.60114570801267, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 114.67726644850836, Y: 63.70763161412492, Width: 18.0, Height: 8
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Text: '40', X: 187.17726644850836, Y: 123.70763161412489, Width: 18.0, Height: 8
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Text: '50', X: 306.1067325572207, Y: 199.08558609946036, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 432.59703912077805, Y: 189.69922401771382, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 535.0428782493691, Y: 38.84995170526332, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 526.2886876279956, Y: 198.53805878254568, Width: 18.0, Height: 8
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Text: '90', X: 375.32932817791846, Y: 312.4884750638542, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 217.56421595108623, Y: 257.0199012001067, Width: 27.0, Height: 8
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Text: '110', X: 197.67726644850836, Y: 347.90925300444576, Width: 27.0, Height: 8
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Text: '111', X: 215.17726644850836, Y: 347.90925300444576, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -33.0 ± 1.2
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Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_12.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_12.svg
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Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

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Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_10.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_10.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...........(((((...))))).((((((....))))))((((((.((........))((((......)))).(((.(((.((((....)))).))))))..)))))).', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_6.svg', '-title', 'HCFC1, -33.6 ± 1.3\n kcal/mol, AUC: 0.696', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_6.svg


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Text: 'C', X: 258.4530910959402, Y: 35.50416421283205, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

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Text: 'HCFC1, -33.6 ± 1.3
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Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_6.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_6.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...........(((((...))))).((((((....))))))........((((.....((((((......)))).(((.(((.((((....)))).))))))))..)))).', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_1.svg', '-title', 'HCFC1, -30.7 ± 1.2\n kcal/mol, AUC: 0.8', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_1.svg


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Text: 'G', X: 127.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 162.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 197.25, Y: 254.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 197.25, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 197.25, Y: 194.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 228.80979886144286, Y: 176.98219398987172, Width: 10.5, Height: 8
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Text: 'C', X: 229.75, Y: 194.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 229.75, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 229.75, Y: 234.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 229.75, Y: 254.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 229.75, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 247.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 264.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 264.75, Y: 254.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 264.75, Y: 234.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 264.75, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 264.75, Y: 194.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 264.75, Y: 174.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 289.750017879933, Y: 143.74931026266822, Width: 10.5, Height: 8
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Text: 'G', X: 297.25, Y: 174.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 297.25, Y: 194.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 297.25, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 297.25, Y: 234.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 297.25, Y: 254.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 297.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 314.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 332.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 349.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 367.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 384.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 402.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 419.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 437.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 454.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'U', X: 454.75, Y: 254.4569418767932, Width: 10.5, Height: 8
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Text: 'C', X: 454.75, Y: 234.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 454.75, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 441.338520954835, Y: 202.7672315617808, Width: 10.5, Height: 8
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Text: 'C', X: 435.1503829759977, Y: 186.08718222784054, Width: 10.5, Height: 8
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Text: 'U', X: 437.69255849458557, Y: 168.47881941182325, Width: 10.5, Height: 8
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Text: 'G', X: 448.3459616992245, Y: 154.2302371108645, Width: 10.5, Height: 8
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Text: 'U', X: 464.5162120215337, Y: 146.81133544406313, Width: 10.5, Height: 8
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Text: 'G', X: 482.2654332339627, Y: 148.02880978878895, Width: 10.5, Height: 8
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Text: 'G', X: 496.4075688576936, Y: 133.886674165058, Width: 10.5, Height: 8
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Text: 'G', X: 499.11704231721797, Y: 116.59768116145503, Width: 10.5, Height: 8
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Text: 'C', X: 489.9792805454737, Y: 98.80719747486435, Width: 10.5, Height: 8
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Text: 'C', X: 480.8415187737295, Y: 81.01671378827368, Width: 10.5, Height: 8
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Text: 'A', X: 471.70375700198525, Y: 63.226230101682916, Width: 10.5, Height: 8
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Text: 'G', X: 456.9356462990523, Y: 53.83729735695675, Width: 10.5, Height: 8
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Text: 'C', X: 451.69334954180067, Y: 37.14096612737279, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

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Text: 'U', X: 528.0265783079278, Y: 101.7488182823707, Width: 10.5, Height: 8
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Text: 'G', X: 551.5263974499222, Y: 125.24865074453791, Width: 10.5, Height: 8
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Text: 'C', X: 569.3168759570435, Y: 134.3864226002838, Width: 10.5, Height: 8
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Text: 'G', X: 587.1073544641647, Y: 143.52419445602962, Width: 10.5, Height: 8
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Text: 'U', X: 602.9995766769812, Y: 147.12006459401502, Width: 10.5, Height: 8
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Text: 'G', X: 611.2847902553592, Y: 161.15032634750534, Width: 10.5, Height: 8
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Text: 'G', X: 625.4269258790902, Y: 175.2924619712363, Width: 10.5, Height: 8
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Text: 'U', X: 639.5690615028211, Y: 189.43459759496724, Width: 10.5, Height: 8
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Text: 'C', X: 655.729218773002, Y: 196.15010332286946, Width: 10.5, Height: 8
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Text: 'C', X: 662.4447245009042, Y: 212.31026059305037, Width: 10.5, Height: 8
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Text: 'G', X: 676.5868601246351, Y: 226.45239621678132, Width: 10.5, Height: 8
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Text: 'A', X: 690.7289957483661, Y: 240.59453184051227, Width: 10.5, Height: 8
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Text: 'G', X: 704.871131372097, Y: 254.73666746424323, Width: 10.5, Height: 8
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Text: 'U', X: 719.4977617518254, Y: 264.34462954427835, Width: 10.5, Height: 8
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Text: 'U', X: 708.9070237479376, Y: 294.12792418545496, Width: 10.5, Height: 8
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Text: 'G', X: 691.4981230635693, Y: 292.3442682325345, Width: 10.5, Height: 8
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Text: 'U', X: 681.8901609835342, Y: 277.71763785280604, Width: 10.5, Height: 8
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Text: 'U', X: 667.7480253598033, Y: 263.5755022290751, Width: 10.5, Height: 8
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Text: 'C', X: 653.6058897360723, Y: 249.43336660534413, Width: 10.5, Height: 8
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Text: 'G', X: 639.4637541123413, Y: 235.29123098161315, Width: 10.5, Height: 8
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Text: 'A', X: 623.3035968421605, Y: 228.57572525371097, Width: 10.5, Height: 8
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Text: 'A', X: 616.5880911142583, Y: 212.41556798353005, Width: 10.5, Height: 8
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Text: 'C', X: 602.4459554905274, Y: 198.2734323597991, Width: 10.5, Height: 8
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Text: 'C', X: 588.3038198667964, Y: 184.13129673606815, Width: 10.5, Height: 8
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Text: 'C', X: 572.2584751985776, Y: 172.43372203010145, Width: 10.5, Height: 8
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Text: 'G', X: 554.4679966914564, Y: 163.2959501743556, Width: 10.5, Height: 8
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Text: 'C', X: 536.6775181843352, Y: 154.15817831860974, Width: 10.5, Height: 8
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Text: 'C', X: 519.3885392462564, Y: 156.86764455362075, Width: 10.5, Height: 8
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Text: 'C', X: 505.2464036225256, Y: 171.00978017735173, Width: 10.5, Height: 8
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Text: 'U', X: 506.61468107510996, Y: 187.8716979278667, Width: 10.5, Height: 8
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Text: 'G', X: 500.140694650466, Y: 203.5012837568613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 487.25, Y: 214.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 487.25, Y: 234.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 487.25, Y: 254.4569418767932, Width: 10.5, Height: 8
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Text: 'G', X: 487.25, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: 'A', X: 504.75, Y: 274.4569418767932, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 294.45694187679317, Width: 9.0, Height: 8
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Text: '10', X: 158.5, Y: 294.45694187679317, Width: 18.0, Height: 8
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Text: '20', X: 245.22267446459398, Y: 188.93527669061555, Width: 18.0, Height: 8
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Text: '30', X: 241.0, Y: 194.4569418767932, Width: 18.0, Height: 8
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Text: '40', X: 313.5, Y: 254.4569418767932, Width: 18.0, Height: 8
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Text: '50', X: 436.85786437626905, Y: 288.5990775005242, Width: 18.0, Height: 8
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Text: '70', X: 516.9724848755742, Y: 25.096784564466816, Width: 18.0, Height: 8
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Text: '80', X: 620.5361237100418, Y: 145.95278284863187, Width: 18.0, Height: 8
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Text: '90', X: 711.8578473945878, Y: 312.9719938747894, Width: 18.0, Height: 8
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Text: '100', X: 554.8707033428317, Y: 190.22420053722257, Width: 27.0, Height: 8
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Text: '110', X: 493.14213562373095, Y: 288.5990775005242, Width: 27.0, Height: 8
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Text: '111', X: 496.5, Y: 294.4569418767932, Width: 27.0, Height: 8
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Text: 'HCFC1, -30.7 ± 1.2
 kcal/mol, AUC: 0.8', X: 303.76570885237294, Y: 325.7719938747894, Width: 129.0, Height: 23
Calculated bounding box: (4.75, 5.0, 731.7814177047459, 325.7719938747894)
Updated viewBox: -0.25 0.0 737.0314177047459 330.7719938747894
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_1.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_1.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '....(((((((.(((((.....))))).))..)))))....((((((.((........))((((......)))).(((.(((.((((....)))).))))))..)))))).', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_9.svg', '-title', 'HCFC1, -33.4 ± 1.3\n kcal/mol, AUC: 0.659', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_9.svg


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Text: 'G', X: 130.26540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'C', X: 130.26540745982712, Y: 269.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 130.26540745982712, Y: 209.46277452491236, Width: 10.5, Height: 8
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Text: 'U', X: 123.58709076650416, Y: 193.33989179006946, Width: 10.5, Height: 8
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Text: 'C', X: 109.44495514277321, Y: 179.1977561663385, Width: 10.5, Height: 8
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Text: 'G', X: 93.28479787259229, Y: 172.48225043843635, Width: 10.5, Height: 8
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Text: 'U', X: 86.56929214469005, Y: 156.32209316825546, Width: 10.5, Height: 8
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Text: 'C', X: 72.4271565209591, Y: 142.1799575445245, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 58.28502089722812, Y: 128.03782192079356, Width: 10.5, Height: 8
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Text: 'G', X: 44.14288527349717, Y: 113.89568629706261, Width: 10.5, Height: 8
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Text: 'U', X: 30.00074964976622, Y: 99.75355067333166, Width: 10.5, Height: 8
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Text: 'G', X: 13.85311076971433, Y: 93.00784341336978, Width: 10.5, Height: 8
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Text: 'A', X: 7.185414163558928, Y: 76.82783631182835, Width: 10.5, Height: 8
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Text: 'G', X: 46.236012778367154, Y: 60.624941404716935, Width: 10.5, Height: 8
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Text: 'A', X: 52.98172003832903, Y: 76.77258028476885, Width: 10.5, Height: 8
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Text: 'C', X: 67.12385566205998, Y: 90.9147159084998, Width: 10.5, Height: 8
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Text: 'A', X: 81.26599128579093, Y: 105.05685153223075, Width: 10.5, Height: 8
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Text: 'G', X: 95.40812690952188, Y: 119.1989871559617, Width: 10.5, Height: 8
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Text: 'G', X: 109.55026253325283, Y: 133.34112277969265, Width: 10.5, Height: 8
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Text: 'A', X: 125.71041980343375, Y: 140.0566285075948, Width: 10.5, Height: 8
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Text: 'G', X: 132.425925531336, Y: 156.2167857777757, Width: 10.5, Height: 8
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Text: 'G', X: 146.56806115506694, Y: 170.35892140150665, Width: 10.5, Height: 8
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Text: 'C', X: 162.74062427988625, Y: 177.08684248413525, Width: 10.5, Height: 8
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Text: 'A', X: 169.44377789373974, Y: 193.26968684937052, Width: 10.5, Height: 8
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Text: 'G', X: 162.76540745982712, Y: 209.46277452491236, Width: 10.5, Height: 8
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Text: 'C', X: 162.76540745982712, Y: 229.46277452491236, Width: 10.5, Height: 8
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Text: 'U', X: 162.76540745982712, Y: 249.46277452491236, Width: 10.5, Height: 8
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Text: 'G', X: 162.76540745982712, Y: 269.46277452491233, Width: 10.5, Height: 8
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Text: 'C', X: 162.76540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 180.26540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 197.76540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'C', X: 215.26540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 232.76540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'C', X: 250.26540745982712, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 250.26540745982712, Y: 269.46277452491233, Width: 10.5, Height: 8
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Text: 'U', X: 250.26540745982712, Y: 249.46277452491236, Width: 10.5, Height: 8
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Text: 'G', X: 250.26540745982712, Y: 229.46277452491236, Width: 10.5, Height: 8
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Text: 'U', X: 250.26540745982712, Y: 209.46277452491236, Width: 10.5, Height: 8
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Text: 'G', X: 250.26540745982712, Y: 189.46277452491236, Width: 10.5, Height: 8
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Text: 'A', X: 235.66098767269207, Y: 179.8211705467257, Width: 10.5, Height: 8
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Text: 'C', X: 226.01938369450542, Y: 165.21675075959067, Width: 10.5, Height: 8
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Text: 'C', X: 206.01938369450542, Y: 165.21675075959067, Width: 10.5, Height: 8
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Text: 'U', X: 192.96526950632528, Y: 176.8718188338744, Width: 10.5, Height: 8
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Text: 'C', X: 175.67217103453552, Y: 179.554961450139, Width: 10.5, Height: 8
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Text: 'G', X: 159.7000958739595, Y: 172.40350536629532, Width: 10.5, Height: 8
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Text: 'A', X: 150.18432150785227, Y: 157.71675803179104, Width: 10.5, Height: 8
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Text: 'C', X: 150.18432150785227, Y: 140.2167434873904, Width: 10.5, Height: 8
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Text: 'U', X: 159.70009587395953, Y: 125.52999615288607, Width: 10.5, Height: 8
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Text: 'G', X: 175.67217103453552, Y: 118.37854006904237, Width: 10.5, Height: 8
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Text: 'U', X: 192.96526950632528, Y: 121.06168268530698, Width: 10.5, Height: 8
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Text: 'G', X: 206.01938369450542, Y: 132.71675075959067, Width: 10.5, Height: 8
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Text: 'G', X: 226.01938369450542, Y: 132.71675075959067, Width: 10.5, Height: 8
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Text: 'G', X: 235.66094690223684, Y: 118.11237174296477, Width: 10.5, Height: 8
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Text: 'C', X: 227.80272143056624, Y: 99.72084400771703, Width: 10.5, Height: 8
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Text: 'C', X: 219.94449595889563, Y: 81.3293162724693, Width: 10.5, Height: 8
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Text: 'A', X: 212.08627048722502, Y: 62.93778853722159, Width: 10.5, Height: 8
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Text: 'G', X: 198.01828050347248, Y: 52.529099396118795, Width: 10.5, Height: 8
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Text: 'C', X: 193.96849855576727, Y: 35.50416421283205, Width: 10.5, Height: 8
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Text: 'A', X: 201.8429947266637, Y: 19.875937765995218, Width: 10.5, Height: 8
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Text: 'G', X: 217.93555921021425, Y: 13.0, Width: 10.5, Height: 8
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Text: 'A', X: 234.67206675479815, Y: 18.11257929319038, Width: 10.5, Height: 8
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Text: 'A', X: 244.17531391363414, Y: 32.80738944021675, Width: 10.5, Height: 8
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Text: 'U', X: 241.97250305700257, Y: 50.168172145756785, Width: 10.5, Height: 8
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Text: 'G', X: 249.83072852867318, Y: 68.55969988100452, Width: 10.5, Height: 8
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Text: 'G', X: 257.68895400034376, Y: 86.95122761625228, Width: 10.5, Height: 8
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Text: 'U', X: 265.54717947201436, Y: 105.34275535150002, Width: 10.5, Height: 8
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Text: 'A', X: 282.7653646512369, Y: 108.47070981632257, Width: 10.5, Height: 8
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Text: 'G', X: 297.3698027846631, Y: 118.11230651017607, Width: 10.5, Height: 8
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Text: 'C', X: 315.76133467339605, Y: 110.25409075940169, Width: 10.5, Height: 8
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Text: 'G', X: 334.1528665621291, Y: 102.39587500862737, Width: 10.5, Height: 8
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Text: 'U', X: 347.99786159717223, Y: 92.24717171682286, Width: 10.5, Height: 8
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Text: 'G', X: 364.71692998436924, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'G', X: 384.71692998436924, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'U', X: 404.71692998436924, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'C', X: 420.89246641445203, Y: 89.46145667367082, Width: 10.5, Height: 8
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Text: 'C', X: 437.0680028445348, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'G', X: 457.0680028445348, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'A', X: 477.0680028445348, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'G', X: 497.0680028445348, Y: 96.13983382516008, Width: 10.5, Height: 8
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Text: 'U', X: 514.204447512126, Y: 92.59109943792097, Width: 10.5, Height: 8
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Text: 'C', X: 527.7756344586597, Y: 103.63981594522713, Width: 10.5, Height: 8
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Text: 'U', X: 527.7756344586597, Y: 121.13985170509304, Width: 10.5, Height: 8
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Text: 'G', X: 514.204447512126, Y: 132.1885682123992, Width: 10.5, Height: 8
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Text: 'U', X: 497.0680028445348, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'U', X: 477.0680028445348, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'C', X: 457.0680028445348, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'G', X: 437.0680028445348, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'A', X: 420.89246641445203, Y: 135.31821097664934, Width: 10.5, Height: 8
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Text: 'A', X: 404.71692998436924, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'C', X: 384.71692998436924, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'C', X: 364.71692998436924, Y: 128.63983382516008, Width: 10.5, Height: 8
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Text: 'C', X: 346.9224671571373, Y: 132.28211432781856, Width: 10.5, Height: 8
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Text: 'G', X: 328.53093526840433, Y: 140.14033007859288, Width: 10.5, Height: 8
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Text: 'C', X: 310.13940337967136, Y: 147.9985458293672, Width: 10.5, Height: 8
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Text: 'C', X: 307.01143981412764, Y: 165.21672935529787, Width: 10.5, Height: 8
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Text: 'C', X: 297.36983540105746, Y: 179.8211623926282, Width: 10.5, Height: 8
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Text: 'U', X: 282.7654074598271, Y: 189.46277452491236, Width: 10.5, Height: 8
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Text: 'G', X: 282.7654074598271, Y: 209.46277452491236, Width: 10.5, Height: 8
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Text: 'C', X: 282.7654074598271, Y: 229.46277452491236, Width: 10.5, Height: 8
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Text: 'G', X: 282.7654074598271, Y: 249.46277452491236, Width: 10.5, Height: 8
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Text: 'A', X: 282.7654074598271, Y: 269.46277452491233, Width: 10.5, Height: 8
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Text: 'G', X: 282.7654074598271, Y: 289.46277452491233, Width: 10.5, Height: 8
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Text: 'A', X: 300.2654074598271, Y: 289.4627745249124, Width: 10.5, Height: 8
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Text: '1', X: 61.01540745982712, Y: 309.46277452491233, Width: 9.0, Height: 8
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Text: '10', X: 99.83714350304622, Y: 193.3858206361382, Width: 18.0, Height: 8
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Text: '20', X: -4.0, Y: 46.52183063500274, Width: 18.0, Height: 8
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Text: '30', X: 156.96560851399724, Y: 156.22219958466295, Width: 18.0, Height: 8
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Text: '40', X: 211.51540745982712, Y: 309.46277452491233, Width: 18.0, Height: 8
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Text: '50', X: 194.9643302672763, Y: 183.83491915568507, Width: 18.0, Height: 8
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Text: '60', X: 203.70801503931514, Y: 125.26855677405837, Width: 18.0, Height: 8
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Text: '70', X: 259.9259872903632, Y: 28.3662479367145, Width: 18.0, Height: 8
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Text: '80', X: 358.9513832611799, Y: 76.24165372228032, Width: 18.0, Height: 8
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Text: '90', X: 542.0886017612215, Y: 129.72642332749183, Width: 18.0, Height: 8
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Text: '100', X: 346.53068290791157, Y: 150.67364621655156, Width: 27.0, Height: 8
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Text: '110', X: 288.65754308355804, Y: 303.6049101486433, Width: 27.0, Height: 8
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Text: '111', X: 292.0154074598271, Y: 309.4627745249124, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_4.svg


Text: 'HCFC1, -33.4 ± 1.3
 kcal/mol, AUC: 0.659', X: 201.48052431110932, Y: 322.2627745249124, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 560.0886017612215, 322.2627745249124)
Updated viewBox: -9.0 0.0 574.0886017612215 327.2627745249124
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_9.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_9.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '...(((((...(((((...))))).((((((....)))))).((((...((((....))))...)))).......(((.(((.((((....)))).)))))).)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_4.svg', '-title', 'HCFC1, -31.9 ± 1.6\n kcal/mol, AUC: 0.753', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
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Text: 'U', X: 169.0080861794822, Y: 451.06902729885076, Width: 10.5, Height: 8
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Text: 'C', X: 169.0080861794822, Y: 411.06902729885076, Width: 10.5, Height: 8
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Text: 'A', X: 169.0080861794822, Y: 391.06902729885076, Width: 10.5, Height: 8
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Text: 'G', X: 169.0080861794822, Y: 371.06902729885076, Width: 10.5, Height: 8
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Text: 'U', X: 148.67480977904933, Y: 363.4781486392768, Width: 10.5, Height: 8
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Text: 'U', X: 131.3011660718654, Y: 350.46968707241183, Width: 10.5, Height: 8
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Text: 'C', X: 118.29270450500042, Y: 333.09604336522784, Width: 10.5, Height: 8
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Text: 'G', X: 110.70182584542653, Y: 312.76276696479505, Width: 10.5, Height: 8
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Text: 'U', X: 90.70182584542653, Y: 312.76276696479505, Width: 10.5, Height: 8
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Text: 'C', X: 70.70182584542653, Y: 312.76276696479505, Width: 10.5, Height: 8
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Text: 'U', X: 50.70182584542653, Y: 312.76276696479505, Width: 10.5, Height: 8
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Text: 'G', X: 30.701825845426526, Y: 312.76276696479505, Width: 10.5, Height: 8
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Text: 'U', X: 13.227077958505049, Y: 311.8225658262379, Width: 10.5, Height: 8
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Text: 'G', X: 4.75, Y: 296.51276696479505, Width: 10.5, Height: 8
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Text: 'A', X: 13.227077958505049, Y: 281.2029681033522, Width: 10.5, Height: 8
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Text: 'C', X: 30.701825845426526, Y: 280.26276696479505, Width: 10.5, Height: 8
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Text: 'A', X: 50.70182584542653, Y: 280.26276696479505, Width: 10.5, Height: 8
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Text: 'G', X: 70.70182584542653, Y: 280.26276696479505, Width: 10.5, Height: 8
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Text: 'A', X: 90.70182584542653, Y: 280.26276696479505, Width: 10.5, Height: 8
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Text: 'C', X: 110.70182584542653, Y: 280.26276696479505, Width: 10.5, Height: 8
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Text: 'A', X: 114.75997266807661, Y: 267.3114922266529, Width: 10.5, Height: 8
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Text: 'G', X: 121.04836372308043, Y: 255.28401489695602, Width: 10.5, Height: 8
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Text: 'A', X: 92.76409247561853, Y: 226.99974364949412, Width: 10.5, Height: 8
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Text: 'G', X: 78.62195685188757, Y: 212.85760802576317, Width: 10.5, Height: 8
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Text: 'G', X: 64.4798212281566, Y: 198.71547240203222, Width: 10.5, Height: 8
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Text: 'C', X: 50.337685604425644, Y: 184.57333677830127, Width: 10.5, Height: 8
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Text: 'C', X: 87.4607916167194, Y: 175.7345020134694, Width: 10.5, Height: 8
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Text: 'U', X: 144.0293341116432, Y: 232.30304450839327, Width: 10.5, Height: 8
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Text: 'C', X: 156.05681144134007, Y: 226.01465345338943, Width: 10.5, Height: 8
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Text: 'U', X: 169.00808617948223, Y: 221.95650663073934, Width: 10.5, Height: 8
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Text: 'U', X: 169.00808617948223, Y: 201.95650663073934, Width: 10.5, Height: 8
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Text: 'G', X: 169.00808617948223, Y: 181.95650663073934, Width: 10.5, Height: 8
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Text: 'G', X: 156.4982999261308, Y: 149.71904797706543, Width: 10.5, Height: 8
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Text: 'A', X: 151.90699384092022, Y: 132.83206912243224, Width: 10.5, Height: 8
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Text: 'C', X: 156.4982999261308, Y: 115.94509026779906, Width: 10.5, Height: 8
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Text: 'C', X: 169.0080861794822, Y: 103.70763161412503, Width: 10.5, Height: 8
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Text: 'U', X: 169.0080861794822, Y: 83.70763161412503, Width: 10.5, Height: 8
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Text: 'C', X: 169.0080861794822, Y: 63.707631614125035, Width: 10.5, Height: 8
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Text: 'G', X: 169.0080861794822, Y: 43.707631614125035, Width: 10.5, Height: 8
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Text: 'A', X: 165.4593517922431, Y: 26.571186946533885, Width: 10.5, Height: 8
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Text: 'C', X: 176.50806829954922, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 194.0081040594152, Y: 13.0, Width: 10.5, Height: 8
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Text: 'G', X: 205.05682056672129, Y: 26.57118694653377, Width: 10.5, Height: 8
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Text: 'U', X: 201.5080861794822, Y: 43.707631614125035, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 63.707631614125035, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 83.70763161412503, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 103.70763161412503, Width: 10.5, Height: 8
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Text: 'C', X: 214.01787243283363, Y: 115.94509026779895, Width: 10.5, Height: 8
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Text: 'C', X: 218.60917851804425, Y: 132.83206912243224, Width: 10.5, Height: 8
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Text: 'A', X: 214.01787243283363, Y: 149.71904797706543, Width: 10.5, Height: 8
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Text: 'G', X: 201.50808617948223, Y: 161.95650663073934, Width: 10.5, Height: 8
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Text: 'C', X: 201.50808617948223, Y: 181.95650663073934, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 201.50808617948223, Y: 201.95650663073934, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 221.95650663073934, Width: 10.5, Height: 8
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Text: 'A', X: 218.82447362152527, Y: 227.98542870414076, Width: 10.5, Height: 8
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Text: 'A', X: 234.20272305675724, Y: 237.97114949524462, Width: 10.5, Height: 8
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Text: 'U', X: 246.75488758412678, Y: 251.3370890839132, Width: 10.5, Height: 8
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Text: 'G', X: 255.7561996908878, Y: 267.31149222665283, Width: 10.5, Height: 8
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Text: 'G', X: 260.6869196482594, Y: 284.9719898445591, Width: 10.5, Height: 8
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Text: 'U', X: 261.26234551246455, Y: 303.29885702050865, Width: 10.5, Height: 8
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Text: 'A', X: 257.4492519404589, Y: 321.23389236536445, Width: 10.5, Height: 8
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Text: 'G', X: 249.467808635884, Y: 337.741519032634, Width: 10.5, Height: 8
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Text: 'C', X: 263.60994425961496, Y: 351.88365465636497, Width: 10.5, Height: 8
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Text: 'G', X: 277.7520798833459, Y: 366.0257902800959, Width: 10.5, Height: 8
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Text: 'U', X: 292.52682896223024, Y: 375.4044394090124, Width: 10.5, Height: 8
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Text: 'G', X: 294.7259086886644, Y: 392.7657849266878, Width: 10.5, Height: 8
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Text: 'G', X: 301.5047926354721, Y: 411.5819145083981, Width: 10.5, Height: 8
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Text: 'U', X: 308.2836765822798, Y: 430.3980440901084, Width: 10.5, Height: 8
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Text: 'C', X: 320.0493276696901, Y: 443.35245858280337, Width: 10.5, Height: 8
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Text: 'C', X: 319.2489190372394, Y: 460.8340702470729, Width: 10.5, Height: 8
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Text: 'G', X: 326.0278689289687, Y: 479.65017607068637, Width: 10.5, Height: 8
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Text: 'A', X: 332.806818820698, Y: 498.4662818942999, Width: 10.5, Height: 8
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Text: 'G', X: 339.58576871242735, Y: 517.2823877179135, Width: 10.5, Height: 8
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Text: 'U', X: 348.7327917871363, Y: 532.2016109037006, Width: 10.5, Height: 8
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Text: 'C', X: 342.9380206503996, Y: 548.7143901691493, Width: 10.5, Height: 8
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Text: 'U', X: 326.4738944116667, Y: 554.6459834451293, Width: 10.5, Height: 8
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Text: 'G', X: 311.47928364674567, Y: 545.6230737367757, Width: 10.5, Height: 8
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Text: 'U', X: 309.0095967490554, Y: 528.2981812919736, Width: 10.5, Height: 8
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Text: 'U', X: 302.23064685732606, Y: 509.48207546836005, Width: 10.5, Height: 8
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Text: 'C', X: 295.45169696559674, Y: 490.66596964474655, Width: 10.5, Height: 8
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Text: 'G', X: 288.67274707386736, Y: 471.849863821133, Width: 10.5, Height: 8
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Text: 'A', X: 276.90702334827927, Y: 458.8954149631872, Width: 10.5, Height: 8
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Text: 'A', X: 277.7074660120005, Y: 441.4137305036709, Width: 10.5, Height: 8
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Text: 'C', X: 270.92858206519287, Y: 422.5976009219606, Width: 10.5, Height: 8
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Text: 'C', X: 264.14969811838523, Y: 403.7814713402503, Width: 10.5, Height: 8
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Text: 'C', X: 254.7711094947831, Y: 389.0067606686587, Width: 10.5, Height: 8
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Text: 'G', X: 240.62897387105215, Y: 374.8646250449278, Width: 10.5, Height: 8
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Text: 'C', X: 226.4868382473212, Y: 360.7224894211968, Width: 10.5, Height: 8
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Text: 'C', X: 214.45936091762434, Y: 367.01088047620067, Width: 10.5, Height: 8
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Text: 'C', X: 201.5080861794822, Y: 371.06902729885076, Width: 10.5, Height: 8
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Text: 'U', X: 201.5080861794822, Y: 391.06902729885076, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 411.06902729885076, Width: 10.5, Height: 8
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Text: 'C', X: 201.5080861794822, Y: 431.06902729885076, Width: 10.5, Height: 8
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Text: 'G', X: 201.5080861794822, Y: 451.06902729885076, Width: 10.5, Height: 8
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Text: 'A', X: 219.0080861794822, Y: 451.06902729885076, Width: 10.5, Height: 8
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Text: 'G', X: 236.50808617948223, Y: 451.06902729885076, Width: 10.5, Height: 8
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Text: 'A', X: 254.00808617948223, Y: 451.06902729885076, Width: 10.5, Height: 8
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Text: '1', X: 117.2580861794822, Y: 471.06902729885076, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_13.svg


Text: '10', X: 113.40903044813444, Y: 364.6118226961428, Width: 18.0, Height: 8
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Text: '20', X: 21.43016065924889, Y: 261.04009250020107, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 46.587685604425644, Y: 212.85760802576317, Width: 18.0, Height: 8
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Text: '40', X: 140.27933411164318, Y: 204.0187732609313, Width: 18.0, Height: 8
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Text: '50', X: 145.95868638729192, Y: 98.4604259138303, Width: 18.0, Height: 8
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Text: '60', X: 217.7580861794822, Y: 83.70763161412503, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 243.2811367503508, Y: 222.62736241036816, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 308.9350131312535, Y: 383.9640483014431, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 320.76799990821274, Y: 574.5501155963024, Width: 18.0, Height: 8
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Text: '100', X: 232.37897387105215, Y: 403.1488962923897, Width: 27.0, Height: 8
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Text: '110', X: 228.25808617948223, Y: 471.06902729885076, Width: 27.0, Height: 8
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Text: '111', X: 245.75808617948223, Y: 471.06902729885076, Width: 27.0, Height: 8
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Text: 'HCFC1, -31.9 ± 1.6
 kcal/mol, AUC: 0.753', X: 110.74139589356815, Y: 587.3501155963023, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 359.2327917871363, 587.3501155963023)
Updated viewBox: -0.25 0.0 364.4827917871363 592.3501155963023
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '.......(((((.....(((((((.(((....((((((..(((..((.(((.......))).))..)))..))))))....)))..)))))))))))).(((...)))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_13.svg', '-title', 'HCFC1, -33.7 ± 1.7\n kcal/mol, AUC: 0.544', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
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Text: 'A', X: 22.25, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'U', X: 57.25, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 74.75, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 92.25, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'A', X: 109.75, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 127.25, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'U', X: 127.25, Y: 291.1272654276918, Width: 10.5, Height: 8
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Text: 'U', X: 127.25, Y: 271.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 127.25, Y: 251.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 127.25, Y: 231.1272654276918, Width: 10.5, Height: 8
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Text: 'U', X: 115.407435595344, Y: 217.42776805246626, Width: 10.5, Height: 8
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Text: 'C', X: 113.35587442480579, Y: 199.4357237890765, Width: 10.5, Height: 8
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Text: 'U', X: 121.81033992897943, Y: 183.4218369076547, Width: 10.5, Height: 8
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Text: 'G', X: 137.82422681040129, Y: 174.96737140348094, Width: 10.5, Height: 8
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Text: 'U', X: 155.81627107379106, Y: 177.01893257401926, Width: 10.5, Height: 8
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Text: 'G', X: 169.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'A', X: 189.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'C', X: 209.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'A', X: 229.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'G', X: 249.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'A', X: 269.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'C', X: 289.5157684490166, Y: 188.8614969786752, Width: 10.5, Height: 8
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Text: 'A', X: 304.64381917092084, Y: 180.06436651644222, Width: 10.5, Height: 8
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Text: 'G', X: 321.87472709914204, Y: 183.12103708803127, Width: 10.5, Height: 8
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Text: 'G', X: 340.65431231757714, Y: 176.24156188831333, Width: 10.5, Height: 8
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Text: 'A', X: 359.43389753601224, Y: 169.36208668859544, Width: 10.5, Height: 8
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Text: 'G', X: 364.75610056172553, Y: 152.69102579438268, Width: 10.5, Height: 8
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Text: 'G', X: 376.8671117910505, Y: 140.05878437060406, Width: 10.5, Height: 8
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Text: 'C', X: 393.29925264204775, Y: 134.0392442354735, Width: 10.5, Height: 8
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Text: 'C', X: 444.3157358160384, Y: 138.2675629509878, Width: 10.5, Height: 8
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Text: 'U', X: 463.09532254871334, Y: 131.38809188484188, Width: 10.5, Height: 8
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Text: 'C', X: 500.65449601406317, Y: 117.62914975255015, Width: 10.5, Height: 8
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Text: 'U', X: 519.4340827467381, Y: 110.74967868640422, Width: 10.5, Height: 8
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Text: 'U', X: 529.0934413978094, Y: 96.15697375822228, Width: 10.5, Height: 8
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Text: 'C', X: 545.5255876014203, Y: 90.13743741277409, Width: 10.5, Height: 8
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Text: 'U', X: 562.3256182096327, Y: 95.03735764009807, Width: 10.5, Height: 8
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Text: 'C', X: 581.1052076733602, Y: 88.1578940291867, Width: 10.5, Height: 8
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Text: 'U', X: 599.8847971370876, Y: 81.27843041827526, Width: 10.5, Height: 8
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Text: 'U', X: 609.5441615812584, Y: 66.685729324725, Width: 10.5, Height: 8
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Text: 'C', X: 783.1389415641522, Y: 31.453250585566025, Width: 10.5, Height: 8
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Text: 'G', X: 773.9279396982826, Y: 63.42148822391073, Width: 10.5, Height: 8
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Text: 'U', X: 757.4458130507112, Y: 69.30278855648191, Width: 10.5, Height: 8
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Text: 'G', X: 740.671215198716, Y: 64.3165014275329, Width: 10.5, Height: 8
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Text: 'G', X: 721.8916471145113, Y: 71.19602340007714, Width: 10.5, Height: 8
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Text: 'G', X: 703.1120790303066, Y: 78.07554537262138, Width: 10.5, Height: 8
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Text: 'C', X: 690.2207640368359, Y: 89.91040902790354, Width: 10.5, Height: 8
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Text: 'C', X: 672.7350472853016, Y: 89.20350756014824, Width: 10.5, Height: 8
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Text: 'A', X: 653.9554550905244, Y: 96.0829637158242, Width: 10.5, Height: 8
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Text: 'G', X: 644.2960906743856, Y: 110.6756563760645, Width: 10.5, Height: 8
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Text: 'C', X: 627.8639486987895, Y: 116.69518377394658, Width: 10.5, Height: 8
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Text: 'A', X: 611.0639255048188, Y: 111.79526329683236, Width: 10.5, Height: 8
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Text: 'G', X: 592.2843360410914, Y: 118.6747269077438, Width: 10.5, Height: 8
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Text: 'A', X: 573.5047465773638, Y: 125.55419051865525, Width: 10.5, Height: 8
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Text: 'A', X: 563.8453879543212, Y: 140.14688701352733, Width: 10.5, Height: 8
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Text: 'U', X: 547.4132483683946, Y: 146.16642093474005, Width: 10.5, Height: 8
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Text: 'G', X: 530.6132232292252, Y: 141.26650712700106, Width: 10.5, Height: 8
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Text: 'A', X: 474.27446303120036, Y: 161.90492032543878, Width: 10.5, Height: 8
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Text: 'G', X: 455.4948762985254, Y: 168.78439139158465, Width: 10.5, Height: 8
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Text: 'C', X: 436.7152895658505, Y: 175.66386245773052, Width: 10.5, Height: 8
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Text: 'G', X: 431.3930846158752, Y: 192.3349192469823, Width: 10.5, Height: 8
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Text: 'U', X: 419.2820745756565, Y: 204.96715720411893, Width: 10.5, Height: 8
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Text: 'G', X: 402.8499368470458, Y: 210.98669619543435, Width: 10.5, Height: 8
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Text: 'G', X: 385.4447996870868, Y: 209.16702577389717, Width: 10.5, Height: 8
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Text: 'U', X: 370.61304473555384, Y: 199.8789126685525, Width: 10.5, Height: 8
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Text: 'C', X: 351.83345951711874, Y: 206.7583878682704, Width: 10.5, Height: 8
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Text: 'C', X: 333.05387429868364, Y: 213.63786306798832, Width: 10.5, Height: 8
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Text: 'G', X: 321.8748626697181, Y: 227.10187803379458, Width: 10.5, Height: 8
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Text: 'A', X: 304.6438963785131, Y: 230.1586411373661, Width: 10.5, Height: 8
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Text: 'G', X: 289.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'U', X: 269.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'C', X: 249.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'U', X: 229.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'G', X: 209.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'U', X: 189.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'U', X: 169.5157684490166, Y: 221.3614969786752, Width: 10.5, Height: 8
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Text: 'C', X: 159.75, Y: 231.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 159.75, Y: 251.1272654276918, Width: 10.5, Height: 8
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Text: 'A', X: 159.75, Y: 271.1272654276918, Width: 10.5, Height: 8
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Text: 'A', X: 159.75, Y: 291.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 159.75, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 177.25, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 194.75, Y: 311.1272654276918, Width: 10.5, Height: 8
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Text: 'G', X: 194.75, Y: 291.1272654276918, Width: 10.5, Height: 8
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Text: 'C', X: 194.75, Y: 271.1272654276918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_11.svg


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Text: 'C', X: 211.0, Y: 245.17543958226528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 226.30979886144286, Y: 253.65251754077036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.25, Y: 271.1272654276918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 291.1272654276918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.25, Y: 311.1272654276918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 244.75, Y: 311.12726542769184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 262.25, Y: 311.12726542769184, Width: 10.5, Height: 8
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Text: 'A', X: 279.75, Y: 311.12726542769184, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 331.1272654276918, Width: 9.0, Height: 8
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Text: '10', X: 103.5, Y: 271.1272654276918, Width: 18.0, Height: 8
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Text: '20', X: 205.7657684490166, Y: 168.8614969786752, Width: 18.0, Height: 8
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Text: '30', X: 362.1766648021167, Y: 123.31642433140021, Width: 18.0, Height: 8
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Text: '40', X: 541.1021551949989, Y: 70.14877840837903, Width: 18.0, Height: 8
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Text: '50', X: 700.0829019365826, Y: 21.899657179039764, Width: 18.0, Height: 8
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Text: '60', X: 725.0211690870556, Y: 89.97559148428189, Width: 18.0, Height: 8
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Text: '70', X: 572.4933417643884, Y: 155.84053991281874, Width: 18.0, Height: 8
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Text: '80', X: 401.56342525781224, Y: 230.83439694010548, Width: 18.0, Height: 8
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Text: '90', X: 225.7657684490166, Y: 241.3614969786752, Width: 18.0, Height: 8
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Text: '100', X: 172.35786437626905, Y: 325.26940105142273, Width: 27.0, Height: 8
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Text: '110', X: 254.0, Y: 331.12726542769184, Width: 27.0, Height: 8
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Text: '111', X: 271.5, Y: 331.12726542769184, Width: 27.0, Height: 8
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Text: 'HCFC1, -33.7 ± 1.7
 kcal/mol, AUC: 0.544', X: 328.25335468244106, Y: 343.92726542769185, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 794.2567093648821, 343.92726542769185)
Updated viewBox: -0.25 0.0 799.5067093648821 348.92726542769185
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_13.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_13.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '.......(((((.((((.....))))(((((....))))).((((.((((.((.((....((((......)))))))).))))))))......))))).(((...)))...', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_11.svg', '-title', 'HCFC1, -31.7 ± 1.8\n kcal/mol, AUC: 0.635', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
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Text: 'G', X: 145.83416780625623, Y: 328.83003033131007, Width: 10.5, Height: 8
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Text: 'C', X: 117.80497501537903, Y: 308.63392243810773, Width: 10.5, Height: 8
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Text: 'U', X: 98.83314882242425, Y: 314.96399438906644, Width: 10.5, Height: 8
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Text: 'G', X: 79.86132262946947, Y: 321.2940663400252, Width: 10.5, Height: 8
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Text: 'U', X: 60.88949643651466, Y: 327.6241382909839, Width: 10.5, Height: 8
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Text: 'G', X: 47.63783168506865, Y: 339.0541071952701, Width: 10.5, Height: 8
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Text: 'A', X: 30.183739649711526, Y: 337.7870321939585, Width: 10.5, Height: 8
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Text: 'C', X: 18.72182619295478, Y: 324.5629878902107, Width: 10.5, Height: 8
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Text: 'C', X: 44.16816247750964, Y: 214.99995288504027, Width: 10.5, Height: 8
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Text: 'A', X: 28.05275739404135, Y: 208.17756542958807, Width: 10.5, Height: 8
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Text: 'G', X: 23.168958997239287, Y: 191.37281119705074, Width: 10.5, Height: 8
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Text: 'U', X: 112.0054983152661, Y: 222.37191778155483, Width: 10.5, Height: 8
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Text: 'C', X: 128.45930251877178, Y: 233.74171669062525, Width: 10.5, Height: 8
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Text: 'G', X: 360.28186560956567, Y: 16.6542363449596, Width: 10.5, Height: 8
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Text: 'G', X: 371.62966414964905, Y: 28.987815672704414, Width: 10.5, Height: 8
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Text: 'G', X: 373.9118722486659, Y: 45.59146698598113, Width: 10.5, Height: 8
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Text: 'C', X: 388.0540078723968, Y: 59.73360260971208, Width: 10.5, Height: 8
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Text: 'C', X: 402.1961434961278, Y: 73.87573823344303, Width: 10.5, Height: 8
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Text: 'A', X: 416.3382791198587, Y: 88.01787385717398, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 433.2706274873185, Y: 92.43881613027077, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 443.3693343789834, Y: 106.7309563106395, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 441.8813431297668, Y: 124.16755672073464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 429.5069915948565, Y: 136.5419082556449, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 412.07039118476143, Y: 138.02989950486153, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 397.77825100439264, Y: 127.93119261319657, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 393.3573087312959, Y: 110.99884424573679, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 379.21517310756496, Y: 96.85670862200584, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 365.073037483834, Y: 82.71457299827489, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 350.93090186010306, Y: 68.57243737454394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 330.2918126079692, Y: 63.96142985947449, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 311.4756830262588, Y: 70.74031380628207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 296.7009723546673, Y: 80.1189024298842, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 282.5588367309363, Y: 94.26103805361515, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 275.84333100303417, Y: 110.42119532379604, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.6831737328532, Y: 117.13670105169831, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 245.54103810912227, Y: 131.27883667542926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 231.39890248539132, Y: 145.4209722991602, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 217.25676686166034, Y: 159.56310792289122, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 208.95197366083787, Y: 173.6076261996174, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 203.37440440152363, Y: 192.8141542866391, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 197.7968351422094, Y: 212.0206823736608, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.21926588289517, Y: 231.22721046068244, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 205.071655453057, Y: 243.10433479011493, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 213.50414699812836, Y: 258.438710758582, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 216.64972653876526, Y: 275.65368474501383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.18497110794863, Y: 292.97924334109547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_2.svg


Text: 'U', X: 206.36330253275761, Y: 308.63400302305394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 193.98893104693389, Y: 321.0083688787587, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 178.33416780625623, Y: 328.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 178.33416780625623, Y: 348.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 178.33416780625623, Y: 368.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 178.33416780625623, Y: 388.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 178.33416780625623, Y: 408.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 195.83416780625623, Y: 408.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 213.33416780625623, Y: 408.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 213.33416780625623, Y: 388.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 213.33416780625623, Y: 368.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 214.27436894481338, Y: 351.3552824443886, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 229.58416780625623, Y: 342.8782044858835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 244.8939666676991, Y: 351.3552824443886, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 245.83416780625623, Y: 368.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.83416780625623, Y: 388.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 245.83416780625623, Y: 408.83003033131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 263.33416780625623, Y: 408.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 280.83416780625623, Y: 408.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 298.33416780625623, Y: 408.83003033131007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 24.084167806256232, Y: 428.83003033131, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 122.08416780625623, Y: 368.83003033131, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: -4.0, Y: 330.8930598411695, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 45.50216777194483, Y: 242.82355599761635, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 127.33092259852901, Y: 213.914283469015, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 218.81006772055946, Y: 80.01359503940455, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 385.97302917694054, Y: 20.465483715476694, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 377.58420075516125, Y: 139.31509402706837, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 270.07530935658417, Y: 131.27883667542926, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 232.89584248468447, Y: 275.25954380910844, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 190.94203218252528, Y: 422.97216595504096, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 272.58416780625623, Y: 428.83003033131007, Width: 27.0, Height: 8
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Text: '111', X: 290.08416780625623, Y: 428.83003033131007, Width: 27.0, Height: 8
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Text: 'HCFC1, -31.7 ± 1.8
 kcal/mol, AUC: 0.635', X: 165.0455802859691, Y: 441.6300303313101, Width: 142.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 453.8693343789834, 441.6300303313101)
Updated viewBox: -9.0 0.0 467.8693343789834 446.6300303313101
Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_11.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_11.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'AAGUGCAGUUCGUCUGUGACAGACAGGAGGCAGCUGCUUCUCUUGUGACCUCGACUGUGGGCCAGCAGAAUGGUAGCGUGGUCCGAGUCUGUUCGAACCCGCCCUGCGAGA', '-structureDBN', '....((((.....)))).((((...((((((....)))))).))))...((((.....((((((......)))).(((.(((.((((....)))).))))))))..)))).', '-o', '/disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_2.svg', '-title', 'HCFC1, -29.5 ± 1.2\n kcal/mol, AUC: 0.781', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,4,5,8,9,10,12,13,15,16,17,18,22,26,27,29,30,33,35,36,38,39,41,43,44,45,46,47,51,53,56,57,58,59,60,61,65,68,71,72,73,74,76,78,79,80,81,82,85,87,88,90,91,92,93,95,101,105,106,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '1,97,98,99,37,100,104,77,50,83,84,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '66,67,14,21,86,24,25,28,94,31,96,102,103,107,111,52', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '64,2,69,6,7,70,11,75,19,20,23,89,32,34,40,42,109,48,49,54,55']
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 22.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 57.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 74.75, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'C', X: 74.75, Y: 254.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 74.75, Y: 234.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 74.75, Y: 214.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 68.10183039518208, Y: 198.26890157713854, Width: 10.5, Height: 8
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Text: 'U', X: 74.8280496512215, Y: 182.11313535088513, Width: 10.5, Height: 8
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Text: 'C', X: 91.0, Y: 175.4259214501407, Width: 10.5, Height: 8
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Text: 'G', X: 107.1719503487785, Y: 182.11313535088513, Width: 10.5, Height: 8
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Text: 'U', X: 113.89816960481792, Y: 198.26890157713854, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 107.25, Y: 214.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 234.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 107.25, Y: 254.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 124.75, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 142.25, Y: 274.45694187679317, Width: 10.5, Height: 8
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Text: 'C', X: 142.25, Y: 254.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 142.25, Y: 234.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 142.25, Y: 214.45694187679317, Width: 10.5, Height: 8
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Text: 'A', X: 131.87031610366017, Y: 200.36750089372663, Width: 10.5, Height: 8
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Text: 'C', X: 131.87031784047468, Y: 182.86749560792032, Width: 10.5, Height: 8
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Text: 'A', X: 142.25000453347002, Y: 168.7780566851489, Width: 10.5, Height: 8
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Text: 'G', X: 158.96359459307448, Y: 163.59094840377077, Width: 10.5, Height: 8
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Text: 'G', X: 170.8260916858514, Y: 147.48873853295308, Width: 10.5, Height: 8
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Text: 'A', X: 182.68858877862831, Y: 131.38652866213542, Width: 10.5, Height: 8
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Text: 'G', X: 194.55108587140523, Y: 115.2843187913177, Width: 10.5, Height: 8
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Text: 'G', X: 206.41358296418215, Y: 99.18210892049999, Width: 10.5, Height: 8
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Text: 'C', X: 218.27608005695907, Y: 83.07989904968233, Width: 10.5, Height: 8
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Text: 'A', X: 225.58300801549512, Y: 67.17832505823884, Width: 10.5, Height: 8
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Text: 'G', X: 242.52785390062513, Y: 62.80528841012119, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 256.617316328234, Y: 73.18499457636628, Width: 10.5, Height: 8
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Text: 'U', X: 257.46334564348507, Y: 90.6645679691675, Width: 10.5, Height: 8
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Text: 'G', X: 244.44217109703783, Y: 102.35645682544484, Width: 10.5, Height: 8
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Text: 'C', X: 232.5796740042609, Y: 118.4586666962625, Width: 10.5, Height: 8
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Text: 'U', X: 220.717176911484, Y: 134.56087656708021, Width: 10.5, Height: 8
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Text: 'U', X: 208.85467981870707, Y: 150.66308643789787, Width: 10.5, Height: 8
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Text: 'C', X: 196.99218272593015, Y: 166.76529630871556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 185.12968563315323, Y: 182.86750617953328, Width: 10.5, Height: 8
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Text: 'C', X: 185.12968215952534, Y: 200.36750617953294, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 214.45694187679317, Width: 10.5, Height: 8
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Text: 'U', X: 174.75, Y: 234.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 174.75, Y: 254.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 274.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.25, Y: 274.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 209.75, Y: 274.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 274.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.75, Y: 274.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 244.75, Y: 254.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.75, Y: 234.45694187679317, Width: 10.5, Height: 8
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Text: 'G', X: 244.75, Y: 214.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 231.338520954835, Y: 202.76723156178076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 225.1503829759977, Y: 186.08718222784051, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.69255849458554, Y: 168.47881941182325, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 238.34596169922452, Y: 154.2302371108645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 254.51621202153365, Y: 146.81133544406313, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 272.2654332339627, Y: 148.02880978878895, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 286.40756885769366, Y: 133.886674165058, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 289.1170423172181, Y: 116.59768116145509, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 279.97928054547384, Y: 98.80719747486441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 270.8415187737296, Y: 81.01671378827368, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 261.70375700198537, Y: 63.226230101682916, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 246.9356462990524, Y: 53.83729735695675, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.69334954180079, Y: 37.14096612737279, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 248.4442057479597, Y: 20.995530478161015, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.0108574172131, Y: 13.0, Width: 10.5, Height: 8
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Text: 'A', X: 281.06670538559337, Y: 16.91755049725856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 291.5842454652402, Y: 30.90434793241485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 290.6132929926952, Y: 48.37736722259859, Width: 10.5, Height: 8
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Text: 'G', X: 299.75105476443946, Y: 66.16785090918933, Width: 10.5, Height: 8
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Text: 'G', X: 308.8888165361837, Y: 83.95833459578009, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 318.026578307928, Y: 101.7488182823707, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 333.65779633830334, Y: 109.61742825407904, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 341.5263974499224, Y: 125.24865074453791, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 359.3168759570435, Y: 134.3864226002838, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 377.10735446416464, Y: 143.52419445602968, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 392.9995766769811, Y: 147.12006459401508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 401.2847902553592, Y: 161.15032634750534, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 415.42692587909016, Y: 175.2924619712363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 429.5690615028211, Y: 189.43459759496724, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 445.72921877300206, Y: 196.15010332286946, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 452.4447245009043, Y: 212.31026059305037, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 466.5868601246352, Y: 226.45239621678132, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 480.7289957483662, Y: 240.59453184051227, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 494.8711313720971, Y: 254.73666746424323, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 509.4977617518256, Y: 264.34462954427835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 511.281417704746, Y: 281.75353022864664, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 498.9070237479377, Y: 294.12792418545496, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 481.49812306356944, Y: 292.3442682325345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 471.8901609835343, Y: 277.71763785280604, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 457.74802535980336, Y: 263.5755022290751, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 443.6058897360724, Y: 249.43336660534413, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 429.46375411234146, Y: 235.29123098161318, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 413.3035968421605, Y: 228.57572525371097, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 406.5880911142583, Y: 212.41556798353005, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 392.44595549052735, Y: 198.2734323597991, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 378.3038198667964, Y: 184.13129673606812, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 362.2584751985776, Y: 172.43372203010145, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 344.4679966914565, Y: 163.2959501743556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 326.6775181843354, Y: 154.15817831860977, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 309.38853924625647, Y: 156.86764455362078, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 295.2464036225255, Y: 171.00978017735173, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 296.61468107510996, Y: 187.8716979278667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 290.14069465046606, Y: 203.5012837568613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.25, Y: 214.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 234.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 277.25, Y: 254.45694187679317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.25, Y: 274.4569418767932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 294.75, Y: 274.4569418767932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 294.45694187679317, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 56.95298765539164, Y: 167.9539466871953, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 118.5, Y: 254.45694187679317, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 186.56137309336447, Y: 87.31961182772307, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 209.34439259674784, Y: 178.6277934014925, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 226.85786437626905, Y: 288.5990775005241, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 268.5154332339627, Y: 119.74453854132705, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 306.97248487557437, Y: 25.096784564466816, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 410.53612371004243, Y: 145.95278284863244, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 501.8578473945879, Y: 312.9719938747894, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 344.87070334283175, Y: 190.2242005372226, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 283.14213562373095, Y: 288.5990775005242, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 286.5, Y: 294.4569418767932, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'HCFC1, -29.5 ± 1.2
 kcal/mol, AUC: 0.781', X: 192.015708852373, Y: 325.7719938747894, Width: 142.5, Height: 23
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Updated SVG: /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/7a7f35b6-dd2a-4fcd-ad91-3b7f658f24e5/final_image/HCFC1_fold_final_2.svg
