Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
  0% [=                                                 ] /                     
  4% [===                                               ] -                     
  9% [=====                                             ] \                     
 13% [=======                                           ] |                     
 18% [==========                                        ] /                     
 22% [============                                      ] -                     
 27% [==============                                    ] \                     
 31% [================                                  ] |                     
 36% [===================                               ] /                     
 40% [=====================                             ] -                     
 45% [=======================                           ] \                     
 49% [=========================                         ] |                     
 54% [============================                      ] /                     
 58% [==============================                    ] -                     
 63% [================================                  ] \                     
 67% [==================================                ] |                     
 72% [=====================================             ] /                     
 76% [=======================================           ] -                     
 81% [=========================================         ] \                     
 85% [===========================================       ] |                     
 90% [==============================================    ] /                     
 94% [================================================  ] -                     
 99% [==================================================] \                     done.
Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_5.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 158.71 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 158.71 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 158.71 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.24 MB
Based on canonical annotations, the following gene is in your area of interest: PLEKHM2(+)
write fasta - Elapsed time since the previous call: 1.01 seconds
write fasta - Current memory usage: 172.24 MB
Length of region: 111 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.20 seconds
write dat - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fasta/PLEKHM2.fasta" "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" --SHAPE "PLEKHM2.dat"

fold - Elapsed time since the previous call: 0.16 seconds
fold - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_FE/PLEKHM2.txt" -sh "PLEKHM2.dat"

efn2 - Elapsed time since the previous call: 0.60 seconds
efn2 - Current memory usage: 175.38 MB
This region has 12 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 1 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 2 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 3 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.03 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 4 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 5 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 6 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 7 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 8 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 9 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp9.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 10 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp10.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 11 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp11.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.38 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/ct/PLEKHM2.ct" 12 "/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/fold_dbn/PLEKHM2_temp12.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 175.38 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '((((.(((...)))((((.(((((.((((((((((((.(((................))).)))))))))))).......))))).)))).((......))..))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_5.svg', '-title', 'PLEKHM2, -46.9 ± 1.3\n kcal/mol, AUC: 0.797', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 524.1093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 524.1093638812481, Y: 360.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 524.1093638812481, Y: 340.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 524.1093638812481, Y: 320.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 509.50494409411306, Y: 310.7045371072834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 499.86334011592635, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 479.86334011592635, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 459.86334011592635, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 442.38859222900487, Y: 295.15991618159126, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 433.9115142704998, Y: 279.85011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 442.38859222900487, Y: 264.54031845870554, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 459.86334011592635, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 479.86334011592635, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 499.86334011592635, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 509.5049033236578, Y: 248.99573830352247, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 501.64667785198714, Y: 230.6042105682748, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 493.7884523803165, Y: 212.212682833027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 485.9302269086459, Y: 193.82115509777933, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 473.43341414525435, Y: 181.57056037278906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 473.21909591514384, Y: 164.0719470547153, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 465.360805986662, Y: 145.6804468603342, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 457.5025160581801, Y: 127.28894666595306, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 449.6442261296982, Y: 108.89744647157193, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 441.7859362012163, Y: 90.5059462771909, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 424.8578729005398, Y: 86.06849612513474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 411.605747410853, Y: 74.63908402436209, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 392.0002437590751, Y: 78.59183326509628, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 372.39474010729725, Y: 82.54458250583036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 352.78923645551936, Y: 86.49733174656456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 333.18373280374146, Y: 90.45008098729863, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 313.5782291519637, Y: 94.40283022803283, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 293.9727255001858, Y: 98.3555794687669, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 274.3672218484079, Y: 102.3083287095011, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.76171819663, Y: 106.26107795023518, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 235.1562145448521, Y: 110.21382719096937, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 215.5507108930742, Y: 114.16657643170345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 195.94520724129632, Y: 118.11932567243764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 181.40866721063242, Y: 127.86285708030664, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 164.2323204186706, Y: 124.51315392308709, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.62683062022882, Y: 128.46597187528266, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 125.02134082178725, Y: 132.41878982747824, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 120.18273080053292, Y: 149.23656671899312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 110.11521933729718, Y: 163.5507198356875, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 95.92367079227996, Y: 173.79033488728865, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 79.16554415231225, Y: 178.8316599144372, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 61.679968872158625, Y: 178.1214320406995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 45.38590864162326, Y: 171.7375955990099, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 32.07156370238603, Y: 160.38074808970683, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 23.19812386848322, Y: 145.29725273801, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.73940947879988, Y: 128.1424557039104, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 22.074998969896807, Y: 110.7990192439803, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 29.94857184010938, Y: 95.17030794816299, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 42.496038678315145, Y: 82.97150298805809, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 58.340371112512585, Y: 75.54136865379508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 75.7427245154437, Y: 73.69532896027647, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 92.79326842615309, Y: 77.63597850819679, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 107.6207819021305, Y: 86.93084863263971, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 118.59801164946943, Y: 100.55986890501049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 138.2035014479111, Y: 96.60705095281492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.80899124635278, Y: 92.65423300061934, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 172.34557590082193, Y: 82.91063476467718, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 189.52198972510337, Y: 86.26038223829858, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.12749337688126, Y: 82.30763299756438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 228.73299702865916, Y: 78.3548837568303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 248.33850068043705, Y: 74.40213451609611, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 267.94400433221494, Y: 70.44938527536203, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 287.54950798399284, Y: 66.49663603462784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.1550116357706, Y: 62.54388679389376, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

Warning: Font Verdana not found. Using default font.
Text: 'C', X: 326.7605152875485, Y: 58.59113755315957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 346.3660189393264, Y: 54.63838831242549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 365.9715225911043, Y: 50.6856390716913, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 385.57702624288214, Y: 46.73288983095722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 405.18252989466, Y: 42.78014059022303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 412.9707308954064, Y: 27.108703988176217, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 426.85692941183515, Y: 16.45865747361438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 444.01174472649865, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 460.9397994972637, Y: 17.4374499070949, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 474.19191994949114, Y: 28.866855119950742, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 481.0679218658469, Y: 44.95941854677221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 480.1667862984704, Y: 62.436201851751775, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 471.6721240170856, Y: 77.73622514340786, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 479.5304139455675, Y: 96.12772533778889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 487.3887038740494, Y: 114.51922553217003, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 495.2469938025313, Y: 132.91072572655105, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 503.1052837310132, Y: 151.3022259209322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 515.6021710025339, Y: 163.55285074266706, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 515.8164594784236, Y: 181.05153870631457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 523.6746849500942, Y: 199.44306644156225, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 531.5329104217648, Y: 217.83459417681004, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 539.3911358934354, Y: 236.22612191205772, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 556.6093210726578, Y: 239.35407637688027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 571.2137592060842, Y: 248.99567307073372, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 589.6052910948172, Y: 241.1374573199594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 600.0139876715953, Y: 227.06947283775165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 617.0389249954035, Y: 223.01969988862575, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 632.6671472801504, Y: 230.8942043198654, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 639.5430765403732, Y: 246.98677243771047, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 634.430488401054, Y: 263.72327728002347, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 619.7356732310609, Y: 273.2265166718737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 602.3748916898253, Y: 271.02369663915056, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 583.9833598010923, Y: 278.8819123899249, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 580.8553962355486, Y: 296.1000959158556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 571.2137918224785, Y: 310.7045289531859, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 556.6093638812481, Y: 320.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 556.6093638812481, Y: 340.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 556.6093638812481, Y: 360.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 556.6093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 574.1093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 591.6093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 609.1093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 626.6093638812481, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 524.8593638812481, Y: 400.3461410854701, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 410.1615142704998, Y: 279.85011732014834, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 451.07758883552503, Y: 171.93022086900373, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 333.38648204447554, Y: 110.05558463907653, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 144.82964857242425, Y: 148.07146167372434, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: -4.0, Y: 128.79323115586408, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 150.10619047201806, Y: 73.04873973882104, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 338.6632696985923, Y: 35.032884660647596, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 495.6424553524444, Y: 67.9474312451872, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 549.625481133184, Y: 221.92793712462685, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 609.895984061156, Y: 283.3229911479812, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 600.8593638812481, Y: 400.3461410854701, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 618.3593638812481, Y: 400.3461410854701, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -46.9 ± 1.3
 kcal/mol, AUC: 0.797', X: 260.6412430095865, Y: 413.1461410854701, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 650.0430765403732, 413.1461410854701)
Updated viewBox: -9.0 0.0 664.0430765403732 418.1461410854701
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_5.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_5.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '.((.(((.....(((((........((((((((((((.(((................))).)))))))))))).)))))...))).))(((.(((.((...)).))).)))', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_9.svg', '-title', 'PLEKHM2, -47.6 ± 1.4\n kcal/mol, AUC: 0.734', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_9.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 23.252578103960474, Y: 319.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.752578103960474, Y: 319.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 40.752578103960474, Y: 299.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 34.074200952471216, Y: 283.1037034101049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 40.752578103960474, Y: 266.9281669800221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 40.752578103960474, Y: 246.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.752578103960445, Y: 226.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 26.929496211924544, Y: 216.19632165901822, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 19.23395346358612, Y: 200.4791743734457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 19.23395474756049, Y: 182.97917160236358, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 26.92949980223156, Y: 167.26202544603444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 40.752583269057254, Y: 156.53018215342837, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 57.88668353799264, Y: 152.97030786323887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 66.68159209715444, Y: 135.00785860274038, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 75.47650065631623, Y: 117.0454093422419, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 84.27140921547803, Y: 99.08296008174341, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 93.06631777463983, Y: 81.12051082124492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 84.66582176736506, Y: 65.76861072470757, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 83.34063385806073, Y: 48.318881593648314, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.32641472881045, Y: 31.874441891740844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 101.55870160199626, Y: 19.359637554701067, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 117.86220367716831, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 135.33763822437533, Y: 13.926475649214865, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 150.87731553698248, Y: 21.974307578520268, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 161.7177852928612, Y: 35.71233455528011, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 165.93126617221517, Y: 52.69749715743444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 184.56597376027568, Y: 59.96025648894755, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 203.20068134833613, Y: 67.22301582046066, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 221.83538893639664, Y: 74.48577515197377, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.4700965244571, Y: 81.74853448348688, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.1048041125176, Y: 89.01129381499999, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 277.7395117005781, Y: 96.2740531465131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 296.3742192886385, Y: 103.5368124780262, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 315.0089268766991, Y: 110.79957180953932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 333.64363446475954, Y: 118.06233114105243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 352.2783420528201, Y: 125.32509047256553, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 370.91304964088056, Y: 132.58784980407864, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 388.4095040766048, Y: 132.2393063521925, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 401.0556563090031, Y: 144.3356791173743, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 419.69038935077026, Y: 151.5983731397099, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 438.32512239253754, Y: 158.86106716204552, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 451.48086930281147, Y: 147.3208726340763, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 467.68493414151465, Y: 140.7119355626814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 485.15899325875273, Y: 139.75955723563726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 501.98534681210015, Y: 144.56825691520845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 516.3173777481659, Y: 154.61030131653467, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 526.5822097659527, Y: 168.78362097556914, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 531.6533234568352, Y: 185.53275744419642, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 530.9741867717524, Y: 203.0195678987513, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 524.6193319247269, Y: 219.32495309456286, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 513.2861758156911, Y: 232.6594699256587, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 498.21848164463563, Y: 241.55971480308173, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 481.0698614626406, Y: 245.04892565429523, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 463.72229964438316, Y: 242.7441771924686, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 448.07961351943413, Y: 234.8984052542282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 435.8585179343934, Y: 222.37264822274096, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 428.40022347579156, Y: 206.54155191580935, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 426.5232446062422, Y: 189.14250835491725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 407.8885115644749, Y: 181.87981433258165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 389.25377852270776, Y: 174.61712031024604, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 371.75725043690886, Y: 174.96569590154445, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 359.11106572717176, Y: 162.86924963467692, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 340.4763581391113, Y: 155.6064903031638, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 321.84165055105075, Y: 148.3437309716507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 303.2069429629903, Y: 141.0809716401376, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 284.57223537492973, Y: 133.81821230862448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 265.9375277868693, Y: 126.55545297711137, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 247.30282019880877, Y: 119.29269364559826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 228.6681126107483, Y: 112.02993431408515, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 210.03340502268782, Y: 104.76717498257204, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 191.39869743462734, Y: 97.50441565105893, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.76398984656686, Y: 90.24165631954583, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 154.12928225850635, Y: 82.97889698803277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 139.5332270576192, Y: 92.63317959072543, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 122.25529782294987, Y: 95.41223722988286, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 113.46038926378807, Y: 113.37468649038135, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 104.66548070462628, Y: 131.33713575087984, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 95.87057214546448, Y: 149.29958501137833, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 87.07566358630268, Y: 167.26203427187681, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 94.77120338632164, Y: 182.97917991561013, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 94.77120146036037, Y: 200.47917991561002, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 87.07565820084292, Y: 216.19632386547875, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 73.25257810396045, Y: 226.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 73.25257810396047, Y: 246.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 73.25257810396047, Y: 266.92816698002207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 79.93095525544973, Y: 283.10370341010486, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 73.25257810396047, Y: 299.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 73.25257810396047, Y: 319.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 90.75257810396047, Y: 319.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.75257810396047, Y: 299.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 90.75257810396047, Y: 279.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 84.07420095247122, Y: 263.1037034101049, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 90.75257810396047, Y: 246.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 90.75257810396047, Y: 226.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 90.75257810396047, Y: 206.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 84.07420095247122, Y: 190.7526305499394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 90.75257810396047, Y: 174.5770941198566, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 90.75257810396047, Y: 154.5770941198566, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 91.69277924251762, Y: 137.1023462329352, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 107.00257810396047, Y: 128.62526827443008, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.31237696540333, Y: 137.1023462329352, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 123.25257810396047, Y: 154.5770941198566, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 123.25257810396047, Y: 174.5770941198566, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 129.93095525544973, Y: 190.7526305499394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 123.25257810396047, Y: 206.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 123.25257810396047, Y: 226.92816698002213, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 123.25257810396047, Y: 246.9281669800221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 129.93095525544973, Y: 263.10370341010486, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 123.25257810396047, Y: 279.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 123.25257810396047, Y: 299.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 123.25257810396047, Y: 319.27923984018764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 24.002578103960474, Y: 339.27923984018764, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: -4.0, Y: 178.46524787737496, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 68.64766577813788, Y: 21.22467856267565, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 243.9828558559702, Y: 63.11382689542637, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 423.20308337310587, Y: 132.9636400979427, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 538.0436645939606, Y: 229.5739675528654, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 378.24106817306915, Y: 193.25184698860792, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 199.0206456911747, Y: 123.40188257063252, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 110.50515912744078, Y: 178.46526047923214, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 67.00257810396047, Y: 299.27923984018764, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 98.75257810396047, Y: 108.62526827443008, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 135.00257810396047, Y: 299.27923984018764, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 115.00257810396047, Y: 339.27923984018764, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_2.svg

Text: 'PLEKHM2, -47.6 ± 1.4
 kcal/mol, AUC: 0.734', X: 206.44363846021065, Y: 352.07923984018765, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 556.0436645939606, 352.07923984018765)
Updated viewBox: -9.0 0.0 570.0436645939606 357.07923984018765
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_9.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_9.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '((((.(((...)))((((.(((((.(((((((((((((((((.....))))........).)))))))))))).......))))).)))).((......))..))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_2.svg', '-title', 'PLEKHM2, -46.5 ± 1.5\n kcal/mol, AUC: 0.853', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 420.83548124923476, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 420.83548124923476, Y: 360.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 420.83548124923476, Y: 340.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 420.83548124923476, Y: 320.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 406.2310614620997, Y: 310.7045371072834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 396.58945748391307, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 376.58945748391307, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 356.58945748391307, Y: 296.10011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 339.1147095969916, Y: 295.15991618159126, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 330.63763163848654, Y: 279.85011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 339.1147095969916, Y: 264.54031845870554, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 356.58945748391307, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.58945748391307, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 396.58945748391307, Y: 263.60011732014834, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 406.23102069164446, Y: 248.99573830352247, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 398.37279521997385, Y: 230.6042105682748, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 390.51456974830324, Y: 212.212682833027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 382.65634427663264, Y: 193.82115509777933, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 370.15953151324106, Y: 181.57056037278906, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 369.94521328313056, Y: 164.0719470547153, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.0869233546487, Y: 145.6804468603342, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 354.2286334261668, Y: 127.28894666595306, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 346.3703434976849, Y: 108.89744647157193, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 338.51205356920303, Y: 90.5059462771909, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 321.5839902685265, Y: 86.06849612513474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 308.3318647788397, Y: 74.63908402436209, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 288.7263611270618, Y: 78.59183326509628, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 269.12085747528397, Y: 82.54458250583036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 249.51535382350608, Y: 86.49733174656456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 229.90985017172818, Y: 90.45008098729863, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 210.30434651995034, Y: 94.40283022803283, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 190.6988428681725, Y: 98.3555794687669, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 171.0933392163946, Y: 102.3083287095011, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 151.48783556461672, Y: 106.26107795023518, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 131.88233191283882, Y: 110.21382719096937, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.27682826106093, Y: 114.16657643170345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 92.67132460928303, Y: 118.11932567243764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 79.69569491515438, Y: 125.0766278837832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 81.88152780258963, Y: 142.43959757550726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 99.08756546531743, Y: 152.63529607775774, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 116.29360312804522, Y: 162.83099458000825, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 133.49964079077301, Y: 173.0266930822588, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 150.81537898898114, Y: 175.55967916370182, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 161.2852899172077, Y: 189.5822243318468, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 158.79409613147845, Y: 206.90402450849157, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 144.79685692225667, Y: 217.40774300993147, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 127.46909563456916, Y: 214.9583560265044, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 116.93163072461596, Y: 200.98650428419145, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 99.72559306188816, Y: 190.79080578194092, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 82.51955539916037, Y: 180.59510727969044, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 65.31351773643257, Y: 170.39940877743996, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 49.03409504345291, Y: 176.8204987770662, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 31.589534561601795, Y: 175.42862608352002, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 16.534250624889182, Y: 166.507391550959, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 6.935830810709604, Y: 151.87454025427837, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 4.75, Y: 134.51158705884097, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 10.422131888096146, Y: 117.95631841577608, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 22.796501920720857, Y: 105.58195110687188, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 39.351771812277434, Y: 99.9098228627538, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 56.71472452659157, Y: 102.0956574952204, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 67.39643358123226, Y: 86.55937472308835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 86.24810709309008, Y: 86.26038223829858, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 105.85361074486798, Y: 82.30763299756438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 125.45911439664587, Y: 78.3548837568303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 145.06461804842377, Y: 74.40213451609611, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 164.67012170020166, Y: 70.44938527536203, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 184.27562535197956, Y: 66.49663603462784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 203.8811290037574, Y: 62.54388679389376, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 223.48663265553523, Y: 58.59113755315957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 243.09213630731313, Y: 54.63838831242549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 262.697639959091, Y: 50.6856390716913, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 282.30314361086886, Y: 46.73288983095722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 301.9086472626467, Y: 42.78014059022303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 309.6968482633931, Y: 27.108703988176217, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 323.58304677982187, Y: 16.45865747361438, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 340.73786209448537, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 357.66591686525044, Y: 17.4374499070949, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 370.91803731747785, Y: 28.866855119950742, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 377.79403923383364, Y: 44.95941854677221, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 376.89290366645713, Y: 62.436201851751775, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 368.3982413850723, Y: 77.73622514340786, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 376.2565313135542, Y: 96.12772533778889, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 384.1148212420361, Y: 114.51922553217003, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 391.973111170518, Y: 132.91072572655105, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 399.8314010989999, Y: 151.3022259209322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 412.3282883705205, Y: 163.55285074266706, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 412.5425768464102, Y: 181.05153870631457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 420.4008023180808, Y: 199.44306644156225, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 428.2590277897514, Y: 217.83459417681004, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 436.1172532614221, Y: 236.22612191205772, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 453.33543844064457, Y: 239.35407637688027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 467.9398765740708, Y: 248.99567307073372, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 486.3314084628038, Y: 241.1374573199594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 496.740105039582, Y: 227.06947283775165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 513.7650423633902, Y: 223.01969988862575, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 529.3932646481371, Y: 230.8942043198654, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 536.2691939083599, Y: 246.98677243771047, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 531.1566057690408, Y: 263.72327728002347, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 516.4617905990476, Y: 273.2265166718737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 499.101009057812, Y: 271.02369663915056, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 480.70947716907904, Y: 278.8819123899249, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 477.5815136035353, Y: 296.1000959158556, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 467.9399091904652, Y: 310.7045289531859, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 453.33548124923476, Y: 320.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 453.33548124923476, Y: 340.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 453.33548124923476, Y: 360.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 453.33548124923476, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 470.83548124923476, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 488.33548124923476, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 505.8354812492348, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 523.3354812492348, Y: 380.3461410854701, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 421.58548124923476, Y: 400.3461410854701, Width: 9.0, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_10.svg


Warning: Font Verdana not found. Using default font.
Text: '10', X: 306.88763163848654, Y: 279.85011732014834, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 347.80370620351175, Y: 171.93022086900373, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 230.11259941246223, Y: 110.05558463907653, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 105.5332639675679, Y: 135.42925841503, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 68.57385689690987, Y: 197.80114494241823, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 33.12326470141367, Y: 99.5823982555375, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 235.389387066579, Y: 35.032884660647596, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 392.36857272043113, Y: 67.9474312451872, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 446.3515985011707, Y: 221.92793712462685, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 506.62210142914273, Y: 283.3229911479812, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 497.5854812492348, Y: 400.3461410854701, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 515.0854812492348, Y: 400.3461410854701, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -46.5 ± 1.5
 kcal/mol, AUC: 0.853', X: 201.50959695417993, Y: 413.1461410854701, Width: 148.5, Height: 23
Calculated bounding box: (4.75, 5.0, 546.7691939083599, 413.1461410854701)
Updated viewBox: -0.25 0.0 552.0191939083599 418.1461410854701
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_2.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '........(((((.(((((.((((.((((((((((((.(((................))).)))))))))))).(((.....)))....))))..))).))..)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_10.svg', '-title', 'PLEKHM2, -45.2 ± 1.2\n kcal/mol, AUC: 0.694', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 268.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 286.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 303.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 321.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 338.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 356.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 373.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 391.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 408.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 408.76583123603666, Y: 319.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 408.76583123603666, Y: 299.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 408.76583123603666, Y: 279.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 408.76583123603666, Y: 259.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 399.9687007738037, Y: 244.52092648069456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 403.0253713453927, Y: 227.29001855247333, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 396.14589614567484, Y: 208.51043333403828, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 386.67426213177566, Y: 193.67700817249323, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 372.5321265080447, Y: 179.53487254876228, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 358.38999088431376, Y: 165.39273692503133, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 341.47233302789357, Y: 160.91610027826647, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 331.4496336748713, Y: 146.57061594719625, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 313.30593805431994, Y: 138.15596745609542, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 295.1622424337686, Y: 129.7413189649945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.0185468132173, Y: 121.32667047389356, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 261.8078265457111, Y: 129.98043810652194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 244.37751893864038, Y: 131.54187399016877, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.26782848958354, Y: 148.79858743810695, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 224.15813804052667, Y: 166.05530088604513, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.0484475914698, Y: 183.3120143339832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 203.93875714241292, Y: 200.56872778192138, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 193.82906669335605, Y: 217.82544122985945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 183.71937624429918, Y: 235.08215467779763, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 173.6096857952423, Y: 252.3388681257357, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 163.49999534618544, Y: 269.5955815736738, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 153.39030489712857, Y: 286.85229502161195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 143.2806144480717, Y: 304.1090084695501, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 133.17092399901483, Y: 321.3657219174882, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 130.75680304088453, Y: 338.6983333871641, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 116.8180350860483, Y: 349.27936113783437, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 106.708405116725, Y: 366.5361100171384, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 96.59877514740165, Y: 383.7928588964424, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 105.92066531386789, Y: 398.60340008287085, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 109.89239712843894, Y: 415.6467305350941, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 108.07809078643638, Y: 433.0524209554113, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 100.67685829514065, Y: 448.9102746601326, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 88.50095182144017, Y: 461.47996312302826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.88662264898599, Y: 469.3820192481645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 55.54747357565694, Y: 471.74922771457074, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 38.38639866989027, Y: 468.32179797944536, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 23.28674915659863, Y: 459.4758751284194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 11.905644042764834, Y: 446.1822596345658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 5.4921087172238, Y: 429.89986634799425, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 412.41561511546, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 9.760761004026449, Y: 395.64832431846236, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.97448311772169, Y: 381.4381291370172, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 34.27025601586584, Y: 371.3445349429136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 51.07918255497398, Y: 366.47526855941993, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 68.55655821853267, Y: 367.364710196292, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 78.66618818785597, Y: 350.10796131698794, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 88.77581815717932, Y: 332.851212437684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 91.18991898868765, Y: 315.5185231721571, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 105.12876464611534, Y: 304.9374749377708, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 115.23845509517221, Y: 287.68076148983266, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 125.34814554422908, Y: 270.42404804189454, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.45783599328595, Y: 253.1673345939564, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 145.56752644234282, Y: 235.9106211460183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 155.6772168913997, Y: 218.65390769808022, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 165.78690734045657, Y: 201.39719425014204, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 175.89659778951344, Y: 184.14048080220397, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 186.0062882385703, Y: 166.88376735426579, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 196.11597868762718, Y: 149.62705390632772, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 206.22566913668405, Y: 132.37034045838953, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 216.33535958574092, Y: 115.11362701045147, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 209.1745113105923, Y: 99.14577643561512, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 209.28552650151212, Y: 81.64612856408962, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 193.07362845961805, Y: 69.93398265143844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 176.86173041772403, Y: 58.22183673878715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 159.8465708527364, Y: 54.13097462724181, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 150.68971217866252, Y: 39.217801019296985, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 154.73950279035446, Y: 22.192819261917066, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 169.63053639636698, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 186.6652412071626, Y: 17.008695529311353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 195.89396752578224, Y: 31.877502420709334, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 212.10586556767626, Y: 43.58964833336063, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 228.31776360957033, Y: 55.30179424601181, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 244.8967164010055, Y: 49.699265857920864, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.30570790407137, Y: 51.48168411584436, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.40535542583507, Y: 60.327623563890256, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 287.4727228277577, Y: 74.64188615735645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 290.69235061125624, Y: 91.84316509049773, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 308.8360462318076, Y: 100.25781358159855, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 326.97974185235887, Y: 108.67246207269949, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 345.1234374729102, Y: 117.08711056380042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 362.54868868703375, Y: 115.47136920928637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.89427971695795, Y: 125.49404440117809, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 381.37096127287657, Y: 142.41176653646852, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 395.51309689660746, Y: 156.55390216019947, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 409.6552325203385, Y: 170.69603778393042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 424.4004380124605, Y: 180.02828226982757, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_7.svg


Text: 'G', X: 426.6627221256319, Y: 197.33128613449668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 433.5421973253498, Y: 216.11087135293172, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 447.006212291156, Y: 227.28988298189728, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 450.0629753947275, Y: 244.5208492731023, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 441.26583123603666, Y: 259.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 441.26583123603666, Y: 279.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 441.26583123603666, Y: 299.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 441.26583123603666, Y: 319.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 441.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 458.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 476.26583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 493.76583123603666, Y: 339.64897720259876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 269.51583123603666, Y: 359.64897720259876, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 385.01583123603666, Y: 319.64897720259876, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 326.26784709430314, Y: 177.3110614553226, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 217.44547059035105, Y: 210.6784182309782, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 120.21515399602902, Y: 376.6457399864617, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 6.7083735319749, Y: 474.8196940413745, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 67.76907813569687, Y: 322.7415673484157, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 164.99957479063218, Y: 156.77407690520891, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 134.77760474846042, Y: 10.480673349265885, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 301.3316297422095, Y: 77.95256949162166, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 430.86627616489665, Y: 181.68171771261638, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 468.01583123603666, Y: 359.64897720259876, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 485.51583123603666, Y: 359.64897720259876, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -45.2 ± 1.2
 kcal/mol, AUC: 0.694', X: 180.25791561801833, Y: 489.54922771457075, Width: 148.5, Height: 23
Calculated bounding box: (4.75, 2.480673349265885, 512.5158312360367, 489.54922771457075)
Updated viewBox: -0.25 -2.519326650734115 517.7658312360367 497.06855436530486
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_10.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_10.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '.....(((...))).((((((((..((((((((((((.(((................))).)))))))))))).(((.....)))..(((....))).)))).))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_7.svg', '-title', 'PLEKHM2, -46.0 ± 1.2\n kcal/mol, AUC: 0.768', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 327.43800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 344.93800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.43800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 379.93800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 397.43800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 414.93800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 414.93800784198237, Y: 299.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 414.93800784198237, Y: 279.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 415.8782089805395, Y: 262.2665578269085, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 431.18800784198237, Y: 253.78947986840345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 446.4978067034252, Y: 262.2665578269085, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 447.43800784198237, Y: 279.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 447.43800784198237, Y: 299.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 447.43800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 464.93800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 482.43800784198237, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 482.43800784198237, Y: 299.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 482.43800784198237, Y: 279.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 482.43800784198237, Y: 259.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 478.6224046013044, Y: 242.66220411067414, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 470.1109127557352, Y: 224.56373714347473, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 461.5994209101661, Y: 206.4652701762753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 453.08792906459695, Y: 188.36680320907587, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 435.6398332816405, Y: 187.02069028148682, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 419.77262008774363, Y: 179.639659735251, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 407.50276830800567, Y: 167.16172706319728, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 388.1770089533808, Y: 172.31100131954926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 368.8512495987559, Y: 177.46027557590114, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.525490244131, Y: 182.60954983225312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 330.1997308895061, Y: 187.758824088605, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 310.87397153488126, Y: 192.90809834495693, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 291.54821218025637, Y: 198.05737260130886, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 272.2224528256315, Y: 203.2066468576608, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 252.89669347100659, Y: 208.35592111401272, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 233.5709341163817, Y: 213.50519537036465, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.2451747617568, Y: 218.65446962671658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 194.9194154071319, Y: 223.8037438830685, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 181.00866778423904, Y: 234.4215826900671, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 163.65903258645545, Y: 232.13301133154368, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.33329127863095, Y: 237.28235331892876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 125.00754997080645, Y: 242.43169530631383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 121.21086193987874, Y: 259.5148720163512, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 112.0413925497564, Y: 274.42026022378025, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 98.50545005924671, Y: 285.5120602311807, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 82.08854362263237, Y: 291.5729965913485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 64.59235530332997, Y: 291.93790864385187, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 47.9370135247279, Y: 286.5667489228507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 33.95036756271982, Y: 276.0489781873764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 24.167389261995666, Y: 261.53887473915404, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.66171674062987, Y: 244.6288575410326, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 20.92782740803655, Y: 227.17472535726492, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 27.826771280637857, Y: 211.09199113844355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 39.60142012116383, Y: 198.1456630415329, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 54.9595588767407, Y: 189.75654267793104, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.21570050203395, Y: 186.84529849058148, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 89.47606062481061, Y: 189.73142650967858, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 104.84639191160444, Y: 198.09818709217174, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 116.63986924130582, Y: 211.02736568109904, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 135.96561054913025, Y: 205.87802369371397, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 155.2913518569547, Y: 200.7286817063289, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 169.20213991547814, Y: 190.11077345701526, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 186.55184474056006, Y: 192.3993849318031, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 205.87760409518495, Y: 187.25011067545117, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.20336344980984, Y: 182.10083641909918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.52912280443473, Y: 176.9515621627473, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 263.85488215905957, Y: 171.80228790639532, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 283.18064151368446, Y: 166.65301365004345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 302.50640086830936, Y: 161.50373939369146, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.83216022293425, Y: 156.3544651373396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 341.15791957755914, Y: 151.2051908809876, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.48367893218403, Y: 146.05591662463573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 379.80943828680887, Y: 140.90664236828374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 399.13519764143376, Y: 135.75736811193187, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 403.5697737493667, Y: 118.82856027608736, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 413.66087962155063, Y: 104.53102264625844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 405.1493567276416, Y: 86.43257028075317, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 396.6378338337325, Y: 68.33411791524799, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 383.732511007301, Y: 56.51449649223895, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 382.94371024239973, Y: 39.03225975917309, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 394.7321551840012, Y: 26.09845236550524, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 412.21243754686805, Y: 25.2674671958942, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 425.1746541923067, Y: 37.0246670102369, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 426.0478189276785, Y: 54.50289321264569, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 434.55934182158757, Y: 72.60134557815098, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 443.0708647154966, Y: 90.69979794365622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 460.5190171182383, Y: 92.04589516551619, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 476.38628040186046, Y: 99.42694901223888, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_8.svg


Warning: Font Verdana not found. Using default font.
Text: 'G', X: 488.65615664430146, Y: 111.90493510756622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 507.98192483260095, Y: 106.75569400502368, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 527.3076930209004, Y: 101.6064529024811, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 542.9527764333358, Y: 93.76536773430928, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 558.9110823402632, Y: 100.94754875246198, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 563.4166775117966, Y: 117.85763047156806, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 553.1476221218453, Y: 132.02794285325885, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 535.675209812532, Y: 133.0108262084677, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 516.3494416242326, Y: 138.16006731101024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 497.02367343593306, Y: 143.30930841355277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 492.5890682862325, Y: 160.23810864175115, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 482.49793788629603, Y: 174.53562896002595, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 491.00942973186517, Y: 192.6340959272254, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 499.5209215774343, Y: 210.73256289442483, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 508.0324134230035, Y: 228.83102986162424, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 518.753642334226, Y: 242.6623439941703, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 514.9380078419824, Y: 259.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 514.9380078419824, Y: 279.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 514.9380078419824, Y: 299.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 514.9380078419824, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 532.4380078419824, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 549.9380078419824, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 567.4380078419824, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 584.9380078419824, Y: 319.74130571383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 328.18800784198237, Y: 339.74130571383, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 427.43800784198237, Y: 233.78947986840345, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 455.3536064074929, Y: 238.30141094093304, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 331.59900514585803, Y: 207.0845834432299, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 145.73263326601602, Y: 256.6080946267532, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: -4.0, Y: 246.50596607303606, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 146.39202680232177, Y: 181.40293588678213, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 332.25864532120727, Y: 131.8794315263627, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 382.4706322900921, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 520.7545433487313, Y: 81.80386842682697, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 500.85789669906467, Y: 184.12260408165625, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 559.1880078419824, Y: 339.74130571383, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 576.6880078419824, Y: 339.74130571383, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -46.0 ± 1.2
 kcal/mol, AUC: 0.768', X: 233.2998622913061, Y: 352.54130571383, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 0.0, 603.6880078419824, 352.54130571383)
Updated viewBox: -9.0 -5.0 617.6880078419824 362.54130571383
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_7.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '...(((((...))).))...((...((((((((((((.(((................))).))))))))))))..))...((.(((((((((....)).))))).)).)).', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_8.svg', '-title', 'PLEKHM2, -46.8 ± 1.1\n kcal/mol, AUC: 0.759', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 4.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 22.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 39.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 57.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 57.25, Y: 452.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 53.43439675932204, Y: 435.6461421815791, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 44.92290491375286, Y: 417.54767521437964, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 36.41141306818369, Y: 399.4492082471802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 29.82541432347321, Y: 383.2357751613997, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 40.07197977598426, Y: 369.04920798255705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 57.53380322030233, Y: 370.2048523447522, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 65.82142188988277, Y: 385.6180339981303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 74.33291373545197, Y: 403.7165009653297, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 82.84440558102114, Y: 421.81496793252916, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 93.56563449224357, Y: 435.6462820650753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 89.75, Y: 452.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 89.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 107.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 124.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 142.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 159.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 159.75, Y: 452.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 148.16884293909868, Y: 439.6055757014991, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 145.64647808527857, Y: 422.2883425210007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 153.00391259362138, Y: 406.410148450547, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 167.84636746724806, Y: 397.1392033634538, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 173.55151862538577, Y: 377.97018538488226, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 179.25666978352348, Y: 358.8011674063107, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 184.9618209416612, Y: 339.63214942773914, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 190.6669720997989, Y: 320.4631314491676, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 196.3721232579366, Y: 301.294113470596, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 202.07727441607432, Y: 282.12509549202446, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 207.78242557421203, Y: 262.9560775134529, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 213.48757673234974, Y: 243.78705953488134, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 219.19272789048745, Y: 224.61804155630972, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 224.89787904862516, Y: 205.44902357773816, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 230.60303020676287, Y: 186.2800055991666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 228.8163161812014, Y: 168.8715291192995, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 239.83134766573215, Y: 155.27312914893452, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 245.53643164210223, Y: 136.104091175615, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 251.24151561847225, Y: 116.93505320229548, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 238.65817487982196, Y: 104.77325636278289, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 230.7386059646146, Y: 89.16780235760137, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 228.351946144212, Y: 71.83131997471202, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 231.76012066052857, Y: 54.666410625202445, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.58909760208638, Y: 39.55684634703749, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 253.86993623359274, Y: 28.160834248305775, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 270.1451239084413, Y: 21.729035692768605, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 287.6285315635392, Y: 20.96731180826788, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 304.40143339623825, Y: 25.959258384624206, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 318.62307844044733, Y: 36.15703160955303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 328.732704753144, Y: 50.44147147705172, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 333.6208260577415, Y: 67.24492459306617, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 332.7509929012139, Y: 84.7232871247898, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 326.21866558251173, Y: 100.95838694930245, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 314.7407378116597, Y: 114.1684944658088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 299.5768608310999, Y: 122.90385945125746, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 282.39120232511647, Y: 126.20581466389677, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 276.68611834874645, Y: 145.3748526372163, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.98103437237637, Y: 164.5438906105358, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 272.7677864872617, Y: 181.9524378468779, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 261.75268442194164, Y: 195.55087623114042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 256.0475332638039, Y: 214.71989420971198, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 250.34238210566622, Y: 233.88891218828354, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.6372309475285, Y: 253.05793016685507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.9320797893908, Y: 272.2269481454266, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 233.2269286312531, Y: 291.39596612399816, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.52177747311538, Y: 310.5649841025697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 221.81662631497767, Y: 329.7340020811413, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 216.11147515683996, Y: 348.90302005971284, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 210.40632399870225, Y: 368.0720380382844, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 204.70117284056454, Y: 387.24105601685596, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 198.99602168242686, Y: 406.4100739954275, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 206.35351237168118, Y: 422.28827700324723, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 203.83117097893486, Y: 439.60554566485894, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.25, Y: 452.72524378473497, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_6.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 192.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 209.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 244.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 262.25, Y: 452.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 255.57162284851074, Y: 436.54970735465224, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 262.25, Y: 420.3741709245694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.25, Y: 400.3741709245694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 258.43439675932206, Y: 383.2950693214136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 249.92290491375286, Y: 365.1966023542142, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 241.41141306818372, Y: 347.09813538701474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 232.89992122261452, Y: 328.9996684198153, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 224.38842937704536, Y: 310.90120145261585, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 213.33553095324822, Y: 295.1707359436157, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 199.19339532951727, Y: 281.02860031988473, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 184.56676494978885, Y: 271.4206382398495, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 182.78310899686835, Y: 254.01173755548123, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 195.15750295367664, Y: 241.637343598673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 212.56640363804496, Y: 243.42099955159347, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 222.17436571808008, Y: 258.0476299313219, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 236.31650134181098, Y: 272.1897655550529, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 250.55556388516283, Y: 280.76670010317036, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 253.7984381987444, Y: 297.0700272035659, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.3099300443136, Y: 315.16849417076537, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 270.8214218898828, Y: 333.2669611379648, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 279.33291373545194, Y: 351.36542810516426, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 287.84440558102114, Y: 369.4638950723637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 298.5656344922436, Y: 383.2952092049097, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.75, Y: 400.3741709245694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.75, Y: 420.3741709245694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 301.42837715148926, Y: 436.5497073546521, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 294.75, Y: 452.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.75, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 312.25, Y: 472.72524378473497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 492.72524378473497, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 27.810487930415093, Y: 350.9507410153576, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 138.5, Y: 492.72524378473497, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 167.7479541212273, Y: 314.75798029102987, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 222.61739366878274, Y: 130.3990071992448, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 309.45285591048594, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 286.4000673470306, Y: 170.24899138235565, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 231.53049313541152, Y: 354.6081712178506, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 241.0, Y: 492.72524378473497, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 202.5399624098459, Y: 319.412693298185, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 262.84441108468576, Y: 287.0276508947045, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 300.64213562373095, Y: 486.8673794084659, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 304.0, Y: 492.72524378473497, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -46.8 ± 1.1
 kcal/mol, AUC: 0.759', X: 100.18541302887076, Y: 505.525243784735, Width: 148.5, Height: 23
Calculated bounding box: (4.75, 0.0, 344.1208260577415, 505.525243784735)
Updated viewBox: -0.25 -5.0 349.3708260577415 515.525243784735
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_8.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '((((((((((((((.(((...))).)))))..)).)))((((.....))))..((...((((...((((((((((.....))))..)))))).))))...)).))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_6.svg', '-title', 'PLEKHM2, -45.4 ± 1.4\n kcal/mol, AUC: 0.778', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 142.3081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 142.3081324210945, Y: 210.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 142.3081324210945, Y: 190.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 142.3081324210945, Y: 170.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 125.34107618201483, Y: 156.70899300379585, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 105.80357746461915, Y: 160.98522310375097, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 86.26607874722346, Y: 165.26145320370608, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 73.07045085214936, Y: 172.47773999778113, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 58.92831522841841, Y: 186.61987562151208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 52.24999853509543, Y: 202.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 52.24999853509543, Y: 222.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 52.24999853509543, Y: 242.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 52.24999853509543, Y: 262.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 52.24999853509543, Y: 282.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 58.92837568658469, Y: 298.91829478643774, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 52.24999853509543, Y: 315.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 52.24999853509543, Y: 335.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 52.24999853509543, Y: 355.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 51.309797396538286, Y: 372.56857910344195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 35.99999853509543, Y: 381.04565706194705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 20.69019967365257, Y: 372.56857910344195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 19.74999853509543, Y: 355.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 19.74999853509543, Y: 335.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.74999853509543, Y: 315.0938312165205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 13.071621383606171, Y: 298.91829478643774, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.74999853509543, Y: 282.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 19.74999853509543, Y: 262.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 19.74999853509543, Y: 242.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.74999853509543, Y: 222.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.74999853509543, Y: 202.742758356355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 13.071628101182867, Y: 186.54967068081314, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 19.774781715036298, Y: 170.3668263155779, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 35.9473448398556, Y: 163.6389052329493, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 50.089480463586554, Y: 149.49676960921835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 60.62178168851189, Y: 134.04139325782387, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 79.31720483479639, Y: 133.5130177879381, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 98.85470355219208, Y: 129.236787687983, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 118.39220226958777, Y: 124.96055758802788, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 125.3409006537629, Y: 108.89925033221084, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 115.08082895712921, Y: 91.73152104788392, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 104.82075726049551, Y: 74.56379176355694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 94.56068556386181, Y: 57.39606247923001, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 80.54946405814901, Y: 46.911002643658435, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 78.03519363311393, Y: 29.592537005286715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 88.48641220886601, Y: 15.556054606924988, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 105.79876019185447, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 119.86042174636073, Y: 23.41731645694739, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 122.45824565089306, Y: 40.723445972200295, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 132.71831734752675, Y: 57.89117525652722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 142.97838904416045, Y: 75.05890454085414, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 153.2384607407941, Y: 92.22663382518107, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 170.67510861970402, Y: 93.71435380787494, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 185.89610313147472, Y: 102.34982287866944, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 196.1182046964919, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 216.1182046964919, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 228.35566335016586, Y: 104.04421346153322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 245.24264220479904, Y: 99.45290737632263, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 262.1296210594322, Y: 104.04421346153322, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 274.36707971310625, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 294.36707971310625, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 314.36707971310625, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 334.36707971310625, Y: 116.55399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 348.4565206961728, Y: 106.17431581854487, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 365.9565259819791, Y: 106.17431755535932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 380.0459649047505, Y: 116.55400424835466, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 385.23307318612865, Y: 133.26759430795914, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 401.33528305694637, Y: 145.1300914007361, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 417.437492927764, Y: 156.99258849351304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 433.53970279858174, Y: 168.85508558628996, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 449.64191266939946, Y: 180.71758267906688, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 465.7441225402172, Y: 192.58007977184383, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 485.3044742009312, Y: 199.0072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 505.30447420093117, Y: 199.0072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 525.3044742009312, Y: 199.0072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 545.3044742009312, Y: 199.0072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 561.4925145005858, Y: 192.3590683808635, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 577.6482807268393, Y: 199.08528763690293, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 584.3354946275837, Y: 215.2572379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 577.6482807268393, Y: 231.4291883344599, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 561.4925145005858, Y: 238.15540759049932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 545.3044742009312, Y: 231.5072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 525.3044742009312, Y: 231.5072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 505.30447420093117, Y: 231.5072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 485.3044742009312, Y: 231.5072379856814, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 470.2608880430826, Y: 238.15765648365047, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 454.6347853357296, Y: 233.0232173841968, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 446.46756476445466, Y: 218.74617081192258, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 430.36535489363695, Y: 206.88367371914563, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 414.26314502281923, Y: 195.0211766263687, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 398.1609351520015, Y: 183.1586795335918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 382.0587252811838, Y: 171.29618244081485, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 365.95651541036614, Y: 159.4336853480379, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 348.4565154103665, Y: 159.43368187441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 334.36707971310625, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 314.36707971310625, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 294.36707971310625, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 274.36707971310625, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 262.1296210594322, Y: 161.5637859682361, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 245.24264220479904, Y: 166.15509205344668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 228.35566335016586, Y: 161.5637859682361, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 216.1182046964919, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 196.1182046964919, Y: 149.05399971488464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 187.4961828852591, Y: 161.74205017904924, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.8081324210945, Y: 170.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 174.8081324210945, Y: 190.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.8081324210945, Y: 210.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.8081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.3081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 209.8081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.3081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 244.8081324210945, Y: 230.364071990282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 143.0581324210945, Y: 250.364071990282, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 62.674573466967146, Y: 216.85238009121218, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 32.24999853509543, Y: 401.04565706194705, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: -4.0, Y: 202.7351035421356, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 94.16309967280229, Y: 101.99159274451756, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 156.39611832848738, Y: 64.79883284422044, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 290.61707971310625, Y: 96.55399971488464, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 457.7544097621764, Y: 164.6153728082492, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 557.7907768619821, Y: 258.15534935902633, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 382.54843805922457, Y: 199.26088940440948, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 209.97887128998036, Y: 178.81046920211512, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 219.0581324210945, Y: 250.364071990282, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 236.5581324210945, Y: 250.364071990282, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -45.4 ± 1.4
 kcal/mol, AUC: 0.778', X: 229.7035580055949, Y: 413.84565706194707, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 594.8354946275837, 413.84565706194707)
Updated viewBox: -9.0 0.0 608.8354946275837 418.84565706194707
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_6.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_6.svg/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_12.svg


['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '.....(((...)))(((..(((((.((((((((((((.(((................))).)))))))))))).(((((((((...))).)).))))...)))))...)))', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_12.svg', '-title', 'PLEKHM2, -44.0 ± 1.0\n kcal/mol, AUC: 0.642', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 327.5168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 345.0168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 362.5168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 380.0168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 397.5168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 415.0168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 415.0168897409222, Y: 402.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 415.0168897409222, Y: 382.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 415.9570908794793, Y: 365.3670847948507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 431.2668897409222, Y: 356.8900068363456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 446.57668860236504, Y: 365.3670847948507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 447.5168897409222, Y: 382.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 447.5168897409222, Y: 402.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 447.5168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 465.0168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 465.0168897409222, Y: 402.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 465.0168897409222, Y: 382.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 453.4357373193726, Y: 369.7221746107464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 450.9133646452188, Y: 352.4049532572935, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 458.2707804266132, Y: 336.5267621660047, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 452.56554651627386, Y: 317.3577688166315, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 446.8603126059345, Y: 298.1887754672583, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 441.1550786955952, Y: 279.01978211788503, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 435.4498447852559, Y: 259.85078876851185, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 421.54666816825466, Y: 254.94602133483508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 410.5065260229904, Y: 245.17512961328046, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 390.97938078674457, Y: 249.498392145508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 371.45223555049876, Y: 253.82165467773555, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 351.92509031425294, Y: 258.1449172099632, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 332.3979450780071, Y: 262.4681797421907, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 312.8707998417613, Y: 266.7914422744183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 293.34365460551555, Y: 271.1147048066458, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 273.81650936926974, Y: 275.4379673388735, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.28936413302392, Y: 279.761229871101, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 234.76221889677808, Y: 284.08449240332857, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 215.23507366053227, Y: 288.4077549355561, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 195.70792842428645, Y: 292.7310174677838, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 181.35848408146913, Y: 302.7480453409412, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 164.12179136926008, Y: 299.7241695656978, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 144.59466128488938, Y: 304.0475005347615, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 125.06753120051869, Y: 308.37083150382523, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 120.54822611583936, Y: 325.277210420144, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 110.75355194390298, Y: 339.77942143695645, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 96.75843037234452, Y: 350.2859117504652, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 80.09876340609807, Y: 355.64364103480875, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 62.60287499105894, Y: 355.2646224613168, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 46.190860637463494, Y: 349.19045162342195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 32.6638655244951, Y: 338.0877416063007, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 23.506416871764692, Y: 323.17496518193366, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 19.72350371590867, Y: 306.0887328715088, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 21.73028385822702, Y: 288.70418225980313, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 29.306522152616004, Y: 272.9291900310511, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 41.62076032794082, Y: 260.4949910350591, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 57.32156581492982, Y: 252.76618300469048, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 74.6858454269146, Y: 250.59096805729726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 91.80794713122654, Y: 254.20806630558312, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 106.80879683752093, Y: 263.2205173928136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 118.04211837579018, Y: 276.6392451167228, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 137.56924846016088, Y: 272.3159141476592, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.09637854453158, Y: 267.9925831785955, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 171.44586623779284, Y: 257.97548764441274, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 188.68262680941663, Y: 260.9994064588843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 208.20977204566245, Y: 256.67614392665666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.73691728190826, Y: 252.35288139442915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 247.26406251815408, Y: 248.0296188622016, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 266.7912077543999, Y: 243.706356329974, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 286.31835299064574, Y: 239.3830937977464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 305.84549822689155, Y: 235.05983126551885, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 325.37264346313736, Y: 230.7365687332913, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 344.8997886993832, Y: 226.4133062010637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 364.426933935629, Y: 222.0900436688361, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 383.95407917187475, Y: 217.76678113660856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 403.4812244081206, Y: 213.443518604381, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 411.0484599124036, Y: 197.66419837749163, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 424.81895651597813, Y: 186.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 424.81895651597813, Y: 166.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 424.81895651597813, Y: 146.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 424.81895651597813, Y: 126.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 421.0033532753001, Y: 109.7858642418388, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 412.491861429731, Y: 91.68739727463935, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 401.43896300593383, Y: 75.95693176563918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 387.2968273822029, Y: 61.81479614190823, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 373.1546917584719, Y: 47.67266051817728, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 361.4630016288575, Y: 34.65132518705673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 366.2944649132799, Y: 17.831463284422398, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 383.1143268159142, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 396.1356621470347, Y: 24.69169012961447, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 410.27779777076563, Y: 38.83382575334542, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 424.41993339449664, Y: 52.97596137707637, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 438.65899593784843, Y: 61.552895925193866, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 441.90187025143007, Y: 77.85622302558943, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 450.4133620969992, Y: 95.95468999278887, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 461.13459100822166, Y: 109.7860041253349, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 457.31895651597813, Y: 126.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 457.31895651597813, Y: 146.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 457.31895651597813, Y: 166.86496584499457, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 457.31895651597813, Y: 186.86496584499469, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 471.9516955191906, Y: 198.77944590754794, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 479.16484998139583, Y: 216.21625434835752, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 477.22545802592504, Y: 234.98619427208055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 466.59945897798735, Y: 250.57978366421045, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 472.30469288832666, Y: 269.74877701358366, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 478.009926798666, Y: 288.91777036295684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 483.7151607090053, Y: 308.08676371233, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 489.4203946193446, Y: 327.2557570617033, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 504.262911423349, Y: 336.52666289246474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 511.6204021126034, Y: 352.40486590028456, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 509.098060719857, Y: 369.72213456189627, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 497.5168897409222, Y: 382.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 497.5168897409222, Y: 402.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 497.5168897409222, Y: 422.8418326817722, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 328.2668897409222, Y: 442.8418326817722, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 427.5168897409222, Y: 336.8900068363456, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 434.5730613424872, Y: 337.97192767237266, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 332.97120761023467, Y: 281.99532497843654, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 145.16799225395306, Y: 323.5746306191322, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_4.svg


Text: '50', X: -4.0, Y: 307.11788267138365, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 149.02306468467162, Y: 248.46544930623367, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 336.8265261671557, Y: 206.8861609648179, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 390.64339446253155, Y: 100.1988891202086, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 451.2732909485024, Y: 50.054641761874734, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 487.7590844921652, Y: 241.8546276288776, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 509.2668897409221, Y: 402.8418326817722, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 489.2668897409222, Y: 442.8418326817722, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -44.0 ± 1.0
 kcal/mol, AUC: 0.642', X: 196.67195291425605, Y: 455.6418326817722, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 536.2668897409221, 455.6418326817722)
Updated viewBox: -9.0 0.0 550.2668897409221 460.6418326817722
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_12.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_12.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '....((((((((((.(((...))).)))))..)).)))(((((..((((.........((((...((((((((((.....))))..)))))).)))).)))).)))))...', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_4.svg', '-title', 'PLEKHM2, -44.6 ± 1.6\n kcal/mol, AUC: 0.815', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.87121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 153.37121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 170.87121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 188.37121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 205.87121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 205.87121132928772, Y: 250.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 205.87121132928772, Y: 230.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 202.05560808860977, Y: 213.06633666912143, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 193.54411624304058, Y: 194.96786970192198, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 180.6168508056301, Y: 183.17250582290853, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 161.81634984941346, Y: 176.35039736618512, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 143.01584889319682, Y: 169.52828890946165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 124.21534793698018, Y: 162.70618045273824, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 105.4148469807636, Y: 155.88407199601477, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 87.93144468148094, Y: 156.64436430865766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 75.00406236713584, Y: 144.84901832568698, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 56.20353750156435, Y: 138.026975759195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 37.4030126359929, Y: 131.20493319270304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 21.296995637024942, Y: 124.36044575233421, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 18.550524865571482, Y: 107.07728370964185, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 31.741405588744307, Y: 95.57722033418872, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 48.48883180654233, Y: 100.65408028614934, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 67.28935667211383, Y: 107.47612285264131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 86.08988153768527, Y: 114.29816541913328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 103.57335671011302, Y: 113.53783924234926, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 116.50077322293916, Y: 125.33325794216273, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 135.3012741791558, Y: 132.1553663988862, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 154.10177513537243, Y: 138.97747485560967, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.90227609158907, Y: 145.79958331233308, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 191.7027770478057, Y: 152.6216917690565, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 209.1862548848442, Y: 151.86142686668126, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 222.11363005814073, Y: 163.65689087318975, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 222.95412506473969, Y: 181.13669545287206, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 231.46561691030885, Y: 199.2351624200715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 242.1868458215313, Y: 213.06647655261756, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 238.37121132928772, Y: 230.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 238.37121132928772, Y: 250.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.37121132928772, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 255.87121132928775, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 255.87121132928775, Y: 250.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 255.87121132928775, Y: 230.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 255.87121132928775, Y: 210.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 255.87121132928775, Y: 190.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 247.07407630154236, Y: 175.01736181451363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 250.13077771705915, Y: 157.7864344319058, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 263.5946974857736, Y: 146.60738498797065, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 270.4740569095306, Y: 127.82775735804239, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 277.3534163332875, Y: 109.04812972811408, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 284.2327757570445, Y: 90.26850209818576, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 273.7200943359569, Y: 76.27797835062313, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 269.4551926496479, Y: 59.30559375097084, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 272.1054989707044, Y: 42.00741171363052, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 281.2562582825295, Y: 27.090480748802577, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 295.475438634667, Y: 16.889199677006673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 312.53783445895755, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 329.7732961930429, Y: 16.03151516659159, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 344.4845906300371, Y: 25.5093335537764, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 354.36949967541324, Y: 39.950240677535476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 357.8811019100887, Y: 57.09433222937389, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.5042866643867, Y: 64.38658768343498, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 395.12747141868465, Y: 71.67884313749607, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 413.7506561729826, Y: 78.97109859155711, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 430.6547346238296, Y: 74.44315018959162, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 446.95002557250297, Y: 80.82387725641843, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 456.2849704347394, Y: 95.62620779664945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 455.02100581451754, Y: 113.08050750881432, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 465.68950932717416, Y: 129.99745264676505, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 476.3580128398308, Y: 146.91439778471573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 487.0265163524874, Y: 163.8313429226664, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 497.69501986514405, Y: 180.74828806061709, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 508.36352337780056, Y: 197.6652331985678, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 522.64078443601, Y: 207.7847498571508, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 542.1364678613409, Y: 212.24774523909826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 561.6321512866716, Y: 216.71074062104572, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 581.1278347120024, Y: 221.1737360029932, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 598.3912176721658, Y: 218.30556295932826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 612.6386485903166, Y: 228.46733052556328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 615.5484718644517, Y: 245.72374198191676, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 605.4211146179484, Y: 259.9956529625585, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 588.1717751520306, Y: 262.94710952283435, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 573.8754672163377, Y: 252.85422156915564, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 554.379783791007, Y: 248.3912261872082, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 534.8841003656762, Y: 243.9282308052607, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 515.3884169403455, Y: 239.46523542331326, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 498.13044258181304, Y: 242.3656355750573, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 483.8530603279881, Y: 232.2460330147705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 480.8734875286308, Y: 215.00155140663477, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 470.20498401597416, Y: 198.0846062686841, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 459.53648050331753, Y: 181.1676611307334, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 448.8679769906609, Y: 164.25071599278272, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 438.1994734780043, Y: 147.333770854832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 427.53096996534765, Y: 130.4168257168813, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 411.23568457186633, Y: 124.03609896007731, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 401.9007410601334, Y: 109.23377381729131, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 383.2775563058354, Y: 101.94151836323022, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 364.6543715515374, Y: 94.64926290916918, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 346.03118679723946, Y: 87.35700745510815, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 331.8120307743055, Y: 97.55826237768804, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 314.749670655678, Y: 101.4474611617909, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 307.870311231921, Y: 120.22708879171915, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 300.9909518081641, Y: 139.0067164216474, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 294.11159238440706, Y: 157.78634405157572, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 297.1683554879786, Y: 175.01731034278077, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 288.37121132928775, Y: 190.14543827227726, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_1.svg


Warning: Font Verdana not found. Using default font.
Text: 'C', X: 288.37121132928775, Y: 210.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 288.37121132928775, Y: 230.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 288.37121132928775, Y: 250.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 288.37121132928775, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 305.87121132928775, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 323.37121132928775, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 340.87121132928775, Y: 270.14543827227726, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 136.62121132928772, Y: 290.14543827227726, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 158.7684285840691, Y: 191.68409281301254, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: -4.0, Y: 100.25524114314987, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 194.77490197707414, Y: 133.82119679021474, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 232.12121132928772, Y: 250.14543827227726, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 251.92043537395375, Y: 84.89249002310811, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 380.0465421184478, Y: 45.76340292913699, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 510.8619650030947, Y: 170.07978454796046, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 580.0058381503799, Y: 282.4535059198486, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 428.20103185271023, Y: 174.91921950543934, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 318.3999388618493, Y: 127.10644821547612, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 315.12121132928775, Y: 290.14543827227726, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 332.62121132928775, Y: 290.14543827227726, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -44.6 ± 1.6
 kcal/mol, AUC: 0.815', X: 248.04949836501163, Y: 302.9454382722773, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 626.0484718644517, 302.9454382722773)
Updated viewBox: -9.0 0.0 640.0484718644517 307.9454382722773
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '.....(((...))).(((((((((((((....))).))((((.....)))).......((((...((((((((((.....))))..)))))).)))).)))).))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_1.svg', '-title', 'PLEKHM2, -42.0 ± 1.2\n kcal/mol, AUC: 0.867', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 37.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 55.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 72.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 90.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 107.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 125.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 125.19968675731883, Y: 233.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 125.19968675731883, Y: 213.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 126.13988789587597, Y: 195.53873937877657, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 141.44968675731883, Y: 187.06166142027146, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 156.7594856187617, Y: 195.53873937877657, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.69968675731883, Y: 213.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 157.69968675731883, Y: 233.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 157.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 175.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 192.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.69968675731883, Y: 233.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 192.69968675731883, Y: 213.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 192.69968675731883, Y: 193.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 188.88408351664089, Y: 175.93438566254218, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 180.37259167107172, Y: 157.83591869534277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 171.86109982550255, Y: 139.73745172814333, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 163.34960797993338, Y: 121.63898476094388, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 130.53147976822973, Y: 115.90747931203126, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 116.38934414449878, Y: 130.0496149357622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 107.010634510134, Y: 144.82440242172848, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 100.23161939056251, Y: 163.64048474533192, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 93.452604270991, Y: 182.45656706893536, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 90.98285731487061, Y: 199.78145095222072, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 75.98821527123505, Y: 208.80430868022594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 59.52410959505295, Y: 202.8726583297673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 53.72939570152576, Y: 186.35985897627333, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 62.876470495135464, Y: 171.44066749963167, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 69.65548561470695, Y: 152.62458517602826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 76.43450073427843, Y: 133.80850285242482, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 78.63366308434445, Y: 116.44723317080152, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 93.40837375593597, Y: 107.0686445471994, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 107.55050937966695, Y: 92.92650892346845, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 103.78102042665245, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 83.78102042665245, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 63.78102042665245, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 43.78102042665245, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 27.592980126997873, Y: 90.47432717470323, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 11.437213900744439, Y: 83.7481079186638, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 4.75, Y: 67.57615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 11.437213900744439, Y: 51.404207221106816, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 27.592980126997816, Y: 44.67798796506739, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 43.78102042665245, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 63.78102042665245, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 83.78102042665245, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 103.78102042665245, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 111.44602263546773, Y: 35.88994764730543, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 123.54227009679039, Y: 23.613562471304135, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 138.8634960414985, Y: 15.721232575367367, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 155.88183112181287, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 172.90016620212717, Y: 15.721232575367253, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 188.22139214683534, Y: 23.613562471304135, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 200.317639608158, Y: 35.88994764730538, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 207.98264181697328, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.98264181697328, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 247.98264181697328, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 267.9826418169733, Y: 51.32615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 282.0720828000398, Y: 40.946473673545455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 299.57208808584613, Y: 40.946475410359966, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 313.66152700861755, Y: 51.3261621033553, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 318.8486352899957, Y: 68.03975216295979, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 334.9508451608134, Y: 79.90224925573673, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 351.0530550316311, Y: 91.76474634851368, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 367.15526490244883, Y: 103.62724344129063, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 383.25747477326655, Y: 115.48974053406758, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 399.35968464408427, Y: 127.35223762684453, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 418.9200363047983, Y: 133.7793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 438.9200363047983, Y: 133.7793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 458.9200363047983, Y: 133.7793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 478.9200363047983, Y: 133.7793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 495.1080766044529, Y: 127.1312262358642, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 511.2638428307064, Y: 133.85744549190363, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 517.9510567314508, Y: 150.0293958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 511.2638428307064, Y: 166.20134618946057, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 495.1080766044529, Y: 172.9275654455, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 478.9200363047983, Y: 166.2793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 458.9200363047983, Y: 166.2793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 438.9200363047983, Y: 166.2793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 418.9200363047983, Y: 166.2793958406821, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 403.8764501469497, Y: 172.92981433865114, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 388.2503474395967, Y: 167.7953752391975, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 380.08312686832176, Y: 153.51832866692328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 363.98091699750404, Y: 141.65583157414633, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 347.8787071266863, Y: 129.79333448136939, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 331.7764972558686, Y: 117.93083738859244, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 315.6742873850509, Y: 106.06834029581549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 299.5720775142332, Y: 94.20584320303854, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_2.svg


Warning: Font Verdana not found. Using default font.
Text: 'U', X: 282.0720775142335, Y: 94.20583972941066, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 267.9826418169733, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 247.98264181697328, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 227.98264181697328, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 207.98264181697328, Y: 83.82615756988528, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 201.95869703816118, Y: 96.82473706393594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.75961680163246, Y: 107.80781051189396, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 201.27110864720163, Y: 125.9062774790934, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.7826004927708, Y: 144.00474444629285, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 218.29409233833996, Y: 162.1032114134923, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 229.0153212495624, Y: 175.93452554603832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 225.19968675731883, Y: 193.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 225.19968675731883, Y: 213.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.19968675731883, Y: 233.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 260.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 277.69968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 295.19968675731883, Y: 253.01348726569802, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 38.44968675731883, Y: 273.013487265698, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 137.69968675731883, Y: 167.06166142027146, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 165.61528532282938, Y: 171.57359249280108, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 74.1940407750441, Y: 228.70844761158014, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 80.03102042665245, Y: 103.82615756988528, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 80.03102042665245, Y: 31.326157569885254, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 224.23264181697328, Y: 31.326157569885254, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 391.3699718660435, Y: 99.38753066324989, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 491.40633896584916, Y: 192.92750721402703, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 316.16400016309166, Y: 134.03304725941013, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 211.11957561440107, Y: 117.39478563352421, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 269.44968675731883, Y: 273.013487265698, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 286.94968675731883, Y: 273.013487265698, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -42.0 ± 1.2
 kcal/mol, AUC: 0.867', X: 192.35052836572538, Y: 285.81348726569803, Width: 148.5, Height: 23
Calculated bounding box: (4.75, 5.0, 528.4510567314508, 285.81348726569803)
Updated viewBox: -0.25 0.0 533.7010567314508 290.81348726569803
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_1.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_1.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '((((.......(((((((((((...)))..))))))))((((.....)))).......((((((.((((((((((.....))))..)))))).))...)))).))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_2.svg', '-title', 'PLEKHM2, -40.8 ± 1.6\n kcal/mol, AUC: 0.853', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 232.03927184794702, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 232.03927184794702, Y: 311.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 232.03927184794702, Y: 291.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 232.03927184794702, Y: 271.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 215.42723280153308, Y: 265.9859444419979, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 200.68496777830313, Y: 256.32003884975205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 188.65127756430684, Y: 243.437709527501, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 180.01085130294751, Y: 228.07193122129826, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 175.25530926617193, Y: 211.09698118102364, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 174.6552307979449, Y: 193.47869480676667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 178.2447589753341, Y: 176.2195118482055, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 185.8196579463861, Y: 160.3014399011476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 171.67752232265508, Y: 146.15930427741665, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 157.53538669892419, Y: 132.0171686536857, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 143.39325107519323, Y: 117.87503302995475, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 129.25111545146228, Y: 103.7328974062238, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 115.10897982773133, Y: 89.59076178249285, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 100.96684420400038, Y: 75.4486261587619, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 86.82470858026937, Y: 61.306490535030946, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 70.70182584542647, Y: 54.62817384170796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 50.70182584542647, Y: 54.62817384170796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 30.70182584542647, Y: 54.62817384170796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 13.227077958504992, Y: 53.68797270315082, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 4.75, Y: 38.37817384170796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 13.227077958504992, Y: 23.068374980265105, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 30.70182584542647, Y: 22.128173841707962, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 50.70182584542647, Y: 22.128173841707962, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 70.70182584542647, Y: 22.128173841707962, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 86.89491352096832, Y: 15.449803407795343, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 103.07775788620359, Y: 22.15295702164883, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 109.80567896883218, Y: 38.325520146468136, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 123.94781459256313, Y: 52.46765577019909, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 138.08995021629408, Y: 66.60979139393004, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 152.23208584002504, Y: 80.75192701766099, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 166.374221463756, Y: 94.89406264139194, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 180.51635708748694, Y: 109.03619826512289, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 194.6584927112179, Y: 123.17833388885384, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 208.80062833494884, Y: 137.3204695125848, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 232.03927184794702, Y: 127.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 232.03927184794702, Y: 107.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 232.03927184794702, Y: 87.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 232.03927184794702, Y: 67.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 225.39110224312907, Y: 51.5066678986928, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 232.1173214991685, Y: 35.35090167243936, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 248.28927184794702, Y: 28.663687771694924, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.4612221967255, Y: 35.35090167243936, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 271.1874414527649, Y: 51.5066678986928, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.539271847947, Y: 67.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 264.539271847947, Y: 87.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.539271847947, Y: 107.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.539271847947, Y: 127.69470819834737, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 281.15131089436096, Y: 133.59422238629355, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 295.89357591759085, Y: 143.2601279785394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 307.92726613158715, Y: 156.14245730079045, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 316.56769239294647, Y: 171.50823560699308, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 321.3232344297221, Y: 188.48318564726776, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 321.92331289794913, Y: 206.10147202152478, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 318.33378472055995, Y: 223.36065498008594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 310.75888574950795, Y: 239.27872692714388, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 324.9010213732389, Y: 253.42086255087483, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 339.04315699696986, Y: 267.5629981746058, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 353.1852926207008, Y: 281.70513379833676, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 370.1028861981123, Y: 286.18172553614596, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 389.38876229469673, Y: 280.8850300392164, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 403.21802661080744, Y: 270.1612784179613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 420.58463150173725, Y: 272.3173013588313, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 439.8704890348537, Y: 267.02053827064856, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 459.1563465679701, Y: 261.72377518246583, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 478.4422041010866, Y: 256.42701209428304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 497.7280616342031, Y: 251.1302490061003, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 517.0139191673195, Y: 245.83348591791753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 530.8430684119954, Y: 235.10970711116835, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 540.7746526073029, Y: 217.74987890431333, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 550.7062368026104, Y: 200.39005069745832, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 560.637820997918, Y: 183.03022249060336, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 562.9059111460867, Y: 165.67779975147425, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 576.7668293101981, Y: 154.99483408245345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 594.1246746957909, Y: 157.22104418204395, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 604.8410572926564, Y: 171.05614273157613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_11.svg


Text: 'A', X: 602.6567402051935, Y: 188.41930968634227, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 588.8475418340572, Y: 199.16904680797808, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 578.9159576387498, Y: 216.52887501483303, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 568.9843734434423, Y: 233.88870322168805, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 559.0527892481348, Y: 251.24853142854306, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 556.8171082007939, Y: 268.6051362305935, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 542.9878415643964, Y: 279.3290060684563, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 525.6211591856165, Y: 277.1730044092318, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 506.3353016525, Y: 282.4697674974145, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 487.04944411938357, Y: 287.7665305855973, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 467.76358658626714, Y: 293.06329367378004, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 448.47772905315065, Y: 298.3600567619628, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 429.19187152003417, Y: 303.65681985014555, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 415.36256729973286, Y: 314.3806412204574, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 397.99589247720724, Y: 312.22457869616613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 378.71001638062285, Y: 317.5212741930957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 366.45184603210436, Y: 330.01076015956767, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 349.0265948179808, Y: 331.62650151408167, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 334.68100378805667, Y: 321.60382632219006, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 330.20432223213805, Y: 304.68610418689957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 316.0621866084071, Y: 290.5439685631686, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 301.92005098467615, Y: 276.40183293943767, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 287.7779153609452, Y: 262.2596973157067, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 276.5711196550996, Y: 268.06850395914523, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 264.539271847947, Y: 271.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 264.539271847947, Y: 291.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.539271847947, Y: 311.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 264.539271847947, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 282.039271847947, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 299.539271847947, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 317.039271847947, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 334.539271847947, Y: 331.8854586299441, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 232.78927184794702, Y: 351.8854586299441, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 150.97829550003252, Y: 191.77069901262274, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 52.84220411056931, Y: 68.80274877357971, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 113.4590638252653, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 208.28927184794702, Y: 107.69470819834737, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 280.789271847947, Y: 107.69470819834737, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 335.2931569969698, Y: 239.27872692714385, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 488.68129854602046, Y: 231.84439147298383, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 616.2904839529137, Y: 198.30897364997614, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 469.3103496744499, Y: 312.34915120689647, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 293.67005098467615, Y: 304.68610418689957, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 308.789271847947, Y: 351.8854586299441, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 326.289271847947, Y: 351.8854586299441, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -40.8 ± 1.6
 kcal/mol, AUC: 0.853', X: 235.7955286463282, Y: 364.6854586299441, Width: 148.5, Height: 23
Calculated bounding box: (4.75, 0.0, 634.2904839529137, 364.6854586299441)
Updated viewBox: -0.25 -5.0 639.5404839529137 374.6854586299441
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_2.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'CCGAGACCCCUGGUGCUGAGGCAGAGCUGGUUGGCGUCCCUGGUGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACUGUCACGGCUGUUGUCAUGCUGUCGGGAGC', '-structureDBN', '((((.(((...)))((....))...((((((((((((.(((................))).)))))))))))).((((...((.(((....)).).)))))).))))....', '-o', '/disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_11.svg', '-title', 'PLEKHM2, -42.1 ± 1.3\n kcal/mol, AUC: 0.69', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '3,5,11,12,13,14,15,17,18,20,21,24,26,28,29,30,31,32,33,34,36,37,41,42,43,44,45,46,47,50,51,55,56,59,60,64,68,71,72,75,76,82,83,84,88,89,91,92,93,94,95,96,99,100,102,103,104,106,107,108,110', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '66,35,67,69,38,6,39,40,70,73,105,48,87,90,27', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '65,4,7,74,16,81,19,85,22,97,98,101,111,49,61,63', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '1,2,8,9,10,77,78,79,80,86,23,25,109,52,53,54,57,58,62']
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 115.92692319364177, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 115.92692319364177, Y: 441.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 115.92692319364177, Y: 421.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 115.92692319364177, Y: 401.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 99.32828335210122, Y: 393.2208544461062, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 86.17281772351323, Y: 380.28563440649043, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 67.33158354107779, Y: 386.9944267331784, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 48.49034935864243, Y: 393.7032190598664, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 31.712677788622372, Y: 398.6792142950883, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 18.591234182435404, Y: 387.0999867914046, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 21.441651676143966, Y: 369.83366373164546, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 37.588561827774456, Y: 363.08621351340884, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 56.42979601020987, Y: 356.3774211867208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 75.27103019264528, Y: 349.66862886003287, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 77.04002966541724, Y: 332.25826870105476, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 59.93322508400591, Y: 321.8969349542148, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 43.43725350831981, Y: 316.0544891161481, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 37.55324331703302, Y: 299.57329754316345, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 46.61942887151325, Y: 284.6048129475766, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 63.95138298344186, Y: 282.18518110397133, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 76.77039242262082, Y: 294.09837750942137, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 93.87719700403214, Y: 304.4597112562613, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 108.4876437749379, Y: 294.8272222137277, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 125.33216487054537, Y: 290.0825294882042, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 142.82219731996565, Y: 290.6730927093967, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 159.30830165554664, Y: 296.54321739600584, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 173.4504372792776, Y: 282.4010817722749, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 187.59257290300854, Y: 268.2589461485439, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 201.73470852673947, Y: 254.11681052481293, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 215.8768441504704, Y: 239.97467490108198, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 230.01897977420134, Y: 225.83253927735097, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 244.16111539793226, Y: 211.69040365361997, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 258.3032510216632, Y: 197.54826802988902, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 272.44538664539414, Y: 183.406132406158, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 286.5875222691251, Y: 169.263996782427, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 300.72965789285604, Y: 155.12186115869616, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 314.871793516587, Y: 140.9797255349651, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 321.58729924448926, Y: 124.81956826478421, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 337.74745651467015, Y: 118.10406253688205, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 351.8895921384011, Y: 103.96192691315099, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 366.03172776213205, Y: 89.81979128942015, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.754813338762, Y: 73.13435030996192, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 361.2186326723648, Y: 55.640504588213616, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 367.37228366532247, Y: 39.258125457958386, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 378.5404306408834, Y: 25.785105765149183, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 393.4974194135191, Y: 16.700049168418218, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 410.60178735454053, Y: 13.0, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 427.97640657481713, Y: 15.091022109149208, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 443.71449031590987, Y: 22.743635170640346, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 456.0888542694744, Y: 35.11799912420497, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 463.74146733096575, Y: 50.856082865297594, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 465.83248944011484, Y: 68.23070208557414, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 462.13244027169674, Y: 85.3350700265957, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 453.0473836749658, Y: 100.29205879923126, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 439.5743639821567, Y: 111.46020577479243, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 423.19198485190145, Y: 117.61385676775006, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 405.6981391301532, Y: 118.07767610135278, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 389.01269815069486, Y: 112.80076167798296, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 374.8705625269639, Y: 126.9428973017138, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.72842690323296, Y: 141.08503292544486, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 354.0129211753308, Y: 157.24519019562575, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 337.8527639051498, Y: 163.9606959235279, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 323.71062828141885, Y: 178.10283154725892, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.5684926576879, Y: 192.24496717098987, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 295.42635703395695, Y: 206.38710279472076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 281.284221410226, Y: 220.52923841845177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 267.14208578649504, Y: 234.67137404218278, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 252.99995016276415, Y: 248.81350966591373, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 238.8578145390332, Y: 262.9556452896447, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 224.71567891530228, Y: 277.0977809133757, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 210.57354329157135, Y: 291.2399165371067, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 196.4314076678404, Y: 305.38205216083765, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 182.28927204410948, Y: 319.5241877845686, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 187.97175471503073, Y: 335.0669520042998, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 188.94874435352986, Y: 351.58704946592945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 207.5528795404761, Y: 358.9277683643636, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 226.15701472742236, Y: 366.2684872627978, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 244.76114991436862, Y: 373.60920616123195, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.9411275605777, Y: 371.17323536431564, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 278.0333309932847, Y: 381.59777067702265, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 282.19092305634524, Y: 399.4628194924406, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 273.25226128144914, Y: 415.4798687404794, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 273.25226128144914, Y: 435.47986874047945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.9306384329384, Y: 451.6554051705622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 273.25226128144914, Y: 467.83094160064496, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 277.06786452212714, Y: 484.9100432038008, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 285.5793563676963, Y: 503.00851017100024, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 296.0835244243493, Y: 517.0054278686284, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 291.86083523898367, Y: 533.9883648243019, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 276.0246442827465, Y: 541.4359354076654, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 260.2508503943691, Y: 533.857104497586, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 256.1693475459972, Y: 516.8396844200502, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 247.65785570042803, Y: 498.7412174528507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 236.9366267892056, Y: 484.90990332030464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 240.75226128144917, Y: 467.83094160064496, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 234.0738841299599, Y: 451.6554051705622, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 240.75226128144917, Y: 435.47986874047945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 240.75226128144917, Y: 415.47986874047945, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 232.8324817044131, Y: 403.8409258400196, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 214.22834651746686, Y: 396.5002069415854, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 195.6242113305206, Y: 389.15948804315127, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 177.02007614357436, Y: 381.8187691447171, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 164.23516433699191, Y: 393.7684984344504, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 148.42692319364178, Y: 401.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 148.42692319364178, Y: 421.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 148.42692319364178, Y: 441.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 148.42692319364178, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 165.92692319364178, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 183.42692319364178, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 200.92692319364178, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 218.42692319364178, Y: 461.2751296331768, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 116.67692319364177, Y: 481.2751296331768, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: -4.0, Y: 393.8087791180926, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 66.20801839295315, Y: 263.1084850835068, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 197.9847085267394, Y: 225.8325392773511, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 333.9974565146702, Y: 89.81979128941998, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 468.62812973388617, Y: 23.513710914904323, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 371.1205625269639, Y: 155.22716854917581, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 235.10781453903326, Y: 291.2399165371066, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 290.8183601430728, Y: 370.3464236014206, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 272.1915950843996, Y: 561.4357629776885, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 198.63762761903268, Y: 415.1043421285317, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 192.67692319364178, Y: 481.2751296331768, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '111', X: 210.17692319364178, Y: 481.2751296331768, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'PLEKHM2, -42.1 ± 1.3
 kcal/mol, AUC: 0.69', X: 173.21186181127513, Y: 574.2357629776884, Width: 148.5, Height: 23
Calculated bounding box: (-4.0, 5.0, 486.62812973388617, 574.2357629776884)
Updated viewBox: -9.0 0.0 500.62812973388617 579.2357629776884
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_11.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8750960e-d44c-457e-a66a-8c95644b54de/final_image/PLEKHM2_fold_final_11.svg
