Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
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Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_1.svg

first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 159.24 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 159.24 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 159.24 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.90 MB
Based on canonical annotations, the following gene is in your area of interest: KPNB1(+)
write fasta - Elapsed time since the previous call: 0.59 seconds
write fasta - Current memory usage: 172.90 MB
Length of region: 129 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.19 seconds
write dat - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fasta/KPNB1.fasta" "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" --SHAPE "KPNB1.dat"

fold - Elapsed time since the previous call: 0.23 seconds
fold - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_FE/KPNB1.txt" -sh "KPNB1.dat"

efn2 - Elapsed time since the previous call: 0.51 seconds
efn2 - Current memory usage: 176.39 MB
This region has 8 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 1 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 2 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 3 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 4 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp4.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 5 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp5.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 6 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp6.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 7 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp7.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/ct/KPNB1.ct" 8 "/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/fold_dbn/KPNB1_temp8.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.39 MB
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '.((((....)))).....((((((...(((.(((((........))))).))))))))).((((...(((......))).....))))((((((((.(((((.......)))))))......)))))).', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_1.svg', '-title', 'KPNB1, -32.6 ± 1.6\n kcal/mol, AUC: 0.736', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
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Text: 'A', X: 113.67125428324346, Y: 59.186797357500694, Width: 10.5, Height: 8
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Text: 'A', X: 130.8768998184368, Y: 55.99055673048801, Width: 10.5, Height: 8
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Text: 'U', X: 146.6498734748453, Y: 63.57102468851875, Width: 10.5, Height: 8
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Text: 'A', X: 154.90297024972728, Y: 79.00269945352463, Width: 10.5, Height: 8
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Text: 'U', X: 173.00137788030375, Y: 87.51431746877242, Width: 10.5, Height: 8
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Text: 'G', X: 191.09978551088022, Y: 96.02593548402027, Width: 10.5, Height: 8
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Text: 'C', X: 209.1981931414567, Y: 104.53755349926806, Width: 10.5, Height: 8
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Text: 'U', X: 227.29660077203317, Y: 113.0491715145159, Width: 10.5, Height: 8
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Text: 'G', X: 244.37556249169285, Y: 116.86480600675944, Width: 10.5, Height: 8
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Text: 'C', X: 264.37556249169285, Y: 116.86480600675944, Width: 10.5, Height: 8
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Text: 'U', X: 276.5226846756771, Y: 104.40825406205872, Width: 10.5, Height: 8
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Text: 'U', X: 293.2902913113082, Y: 99.764372989463, Width: 10.5, Height: 8
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Text: 'U', X: 310.1149715016777, Y: 104.19702458816292, Width: 10.5, Height: 8
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Text: 'C', X: 322.4177814185965, Y: 116.49983450508174, Width: 10.5, Height: 8
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Text: 'A', X: 326.85043301729644, Y: 133.32451469545126, Width: 10.5, Height: 8
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Text: 'G', X: 322.2065519447007, Y: 150.09212133108232, Width: 10.5, Height: 8
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Text: 'A', X: 309.75, Y: 162.23924351506662, Width: 10.5, Height: 8
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Text: 'A', X: 309.75, Y: 182.23924351506662, Width: 10.5, Height: 8
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Text: 'A', X: 309.75, Y: 202.23924351506662, Width: 10.5, Height: 8
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Text: 'A', X: 309.75, Y: 222.23924351506662, Width: 10.5, Height: 8
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Text: 'A', X: 309.75, Y: 242.23924351506662, Width: 10.5, Height: 8
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Text: 'C', X: 309.75, Y: 262.2392435150666, Width: 10.5, Height: 8
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Text: 'C', X: 327.25, Y: 262.2392435150666, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 282.2392435150666, Width: 9.0, Height: 8
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Text: '10', X: 70.85671253071119, Y: 199.8494804572098, Width: 18.0, Height: 8
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Text: '20', X: 136.0, Y: 242.23924351506662, Width: 18.0, Height: 8
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Text: '30', X: 206.09564008412536, Y: 81.69831051219, Width: 18.0, Height: 8
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Text: '40', X: 379.73576441016684, Y: 8.0, Width: 18.0, Height: 8
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Text: '50', X: 259.31567079541935, Y: 142.51356122091153, Width: 18.0, Height: 8
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Text: '60', X: 206.0, Y: 282.2392435150666, Width: 18.0, Height: 8
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Text: '70', X: 174.98717681348754, Y: 117.0208383491532, Width: 18.0, Height: 8
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Text: '80', X: 264.3830089657434, Y: 113.68292522742968, Width: 18.0, Height: 8
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Text: '90', X: 253.5, Y: 242.23924351506662, Width: 18.0, Height: 8
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Text: '100', X: 160.50678822085473, Y: 143.53425551428353, Width: 27.0, Height: 8
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Text: '110', X: 157.97427550545387, Y: 62.5154908569593, Width: 27.0, Height: 8
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Text: '120', X: 331.5092112734505, Y: 106.53615995252937, Width: 27.0, Height: 8
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Text: '129', X: 319.0, Y: 282.2392435150666, Width: 27.0, Height: 8
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Text: 'KPNB1, -32.6 ± 1.6
 kcal/mol, AUC: 0.736', X: 125.51330043110335, Y: 295.03924351506663, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 397.73576441016684, 295.03924351506663)
Updated viewBox: -0.25 -5.0 402.98576441016684 305.03924351506663/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_4.svg


Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_1.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_1.svg
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Text: 'A', X: 147.70589636189743, Y: 212.94338240174287, Width: 10.5, Height: 8
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Text: 'G', X: 147.70589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 147.70589636189743, Y: 172.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 144.15716197465832, Y: 155.8069377341517, Width: 10.5, Height: 8
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Text: 'C', X: 155.20587848196445, Y: 142.23575078761792, Width: 10.5, Height: 8
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Text: 'A', X: 172.7059142418304, Y: 142.23575078761792, Width: 10.5, Height: 8
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Text: 'U', X: 183.75463074913654, Y: 155.8069377341517, Width: 10.5, Height: 8
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Text: 'C', X: 180.20589636189743, Y: 172.9433824017429, Width: 10.5, Height: 8
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Text: 'C', X: 180.20589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 180.20589636189743, Y: 212.94338240174287, Width: 10.5, Height: 8
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Text: 'G', X: 180.20589636189743, Y: 232.94338240174287, Width: 10.5, Height: 8
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Text: 'A', X: 197.70589636189743, Y: 232.94338240174287, Width: 10.5, Height: 8
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Text: 'A', X: 215.20589636189743, Y: 232.94338240174287, Width: 10.5, Height: 8
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Text: 'U', X: 232.70589636189743, Y: 232.94338240174287, Width: 10.5, Height: 8
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Text: 'U', X: 250.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 267.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 285.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'A', X: 302.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 320.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'A', X: 337.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 355.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'C', X: 372.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'C', X: 372.70589636189743, Y: 212.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 372.70589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 362.32621304449566, Y: 178.8539431806118, Width: 10.5, Height: 8
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Text: 'U', X: 362.32621304449566, Y: 161.35393965674086, Width: 10.5, Height: 8
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Text: 'C', X: 372.70589636189743, Y: 147.26450043560976, Width: 10.5, Height: 8
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Text: 'A', X: 372.70589636189743, Y: 127.26450043560976, Width: 10.5, Height: 8
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Text: 'G', X: 363.9087795963603, Y: 112.13652692125561, Width: 10.5, Height: 8
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Text: 'C', X: 346.5262765235828, Y: 102.2446824559963, Width: 10.5, Height: 8
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Text: 'A', X: 329.14377345080527, Y: 92.35283799073707, Width: 10.5, Height: 8
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Text: 'A', X: 311.76127037802775, Y: 82.46099352547779, Width: 10.5, Height: 8
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Text: 'U', X: 294.7873055706177, Y: 87.28271723988647, Width: 10.5, Height: 8
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Text: 'A', X: 277.7288879929224, Y: 82.76886183610307, Width: 10.5, Height: 8
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Text: 'A', X: 265.3611752736904, Y: 70.18298948032921, Width: 10.5, Height: 8
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Text: 'G', X: 245.36117527369038, Y: 70.18298948032921, Width: 10.5, Height: 8
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Text: 'A', X: 225.3611752736904, Y: 70.18298948032921, Width: 10.5, Height: 8
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Text: 'A', X: 205.3611752736904, Y: 70.18298948032921, Width: 10.5, Height: 8
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Text: 'G', X: 185.3611752736904, Y: 70.18298948032921, Width: 10.5, Height: 8
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Text: 'G', X: 168.28207367053457, Y: 73.99859272100716, Width: 10.5, Height: 8
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Text: 'G', X: 150.18360670333513, Y: 82.5100845665763, Width: 10.5, Height: 8
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Text: 'A', X: 132.0851397361357, Y: 91.02157641214549, Width: 10.5, Height: 8
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Text: 'U', X: 113.98667276893627, Y: 99.53306825771463, Width: 10.5, Height: 8
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Text: 'G', X: 108.2365554443112, Y: 116.06142097548178, Width: 10.5, Height: 8
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Text: 'U', X: 94.90907181390912, Y: 127.40287030487696, Width: 10.5, Height: 8
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Text: 'U', X: 77.67370204492795, Y: 130.4347544940178, Width: 10.5, Height: 8
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Text: 'G', X: 61.27589166148192, Y: 124.32229938674521, Width: 10.5, Height: 8
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Text: 'G', X: 43.17742026912083, Y: 132.83378182283633, Width: 10.5, Height: 8
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Text: 'U', X: 29.180497110328815, Y: 143.33794260242547, Width: 10.5, Height: 8
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Text: 'G', X: 12.19756235005326, Y: 139.11524458755264, Width: 10.5, Height: 8
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Text: 'A', X: 4.75, Y: 123.27904975929113, Width: 10.5, Height: 8
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Text: 'G', X: 12.328839110947001, Y: 107.50525981118523, Width: 10.5, Height: 8
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Text: 'C', X: 29.346261310472812, Y: 103.42376581024948, Width: 10.5, Height: 8
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Text: 'U', X: 47.4447327028339, Y: 94.91228337415842, Width: 10.5, Height: 8
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Text: 'U', X: 53.194853723449455, Y: 78.38394080001396, Width: 10.5, Height: 8
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Text: 'U', X: 66.5223324566773, Y: 67.04249862472781, Width: 10.5, Height: 8
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Text: 'G', X: 83.75769359210375, Y: 64.01061364481316, Width: 10.5, Height: 8
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Text: 'A', X: 100.15549851988635, Y: 70.12305943601555, Width: 10.5, Height: 8
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Text: 'U', X: 118.2539654870858, Y: 61.61156759044641, Width: 10.5, Height: 8
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Text: 'C', X: 136.35243245428524, Y: 53.100075744877216, Width: 10.5, Height: 8
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Text: 'C', X: 154.45089942148468, Y: 44.58858389930808, Width: 10.5, Height: 8
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Text: 'U', X: 168.2822135540307, Y: 33.86735498808562, Width: 10.5, Height: 8
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Text: 'C', X: 185.3611752736904, Y: 37.68298948032921, Width: 10.5, Height: 8
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Text: 'U', X: 205.3611752736904, Y: 37.68298948032921, Width: 10.5, Height: 8
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Text: 'U', X: 225.3611752736904, Y: 37.68298948032921, Width: 10.5, Height: 8
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Text: 'U', X: 245.36117527369038, Y: 37.68298948032921, Width: 10.5, Height: 8
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Text: 'U', X: 323.4319390854236, Y: 37.36779845484213, Width: 10.5, Height: 8
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Text: 'U', X: 327.83551763407405, Y: 54.214426032214334, Width: 10.5, Height: 8
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Text: 'C', X: 379.9830268524066, Y: 83.88995942799212, Width: 10.5, Height: 8
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Text: 'G', X: 410.94627741701674, Y: 94.90540621490825, Width: 10.5, Height: 8
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Text: 'U', X: 414.0030405205883, Y: 112.13637250611333, Width: 10.5, Height: 8
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Text: 'U', X: 405.20589636189743, Y: 127.26450043560976, Width: 10.5, Height: 8
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Text: 'G', X: 405.20589636189743, Y: 147.26450043560976, Width: 10.5, Height: 8
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Text: 'U', X: 415.5855796792992, Y: 161.35393965674086, Width: 10.5, Height: 8
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Text: 'U', X: 415.5855796792992, Y: 178.8539431806118, Width: 10.5, Height: 8
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Text: 'A', X: 405.20589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 405.20589636189743, Y: 212.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 405.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'A', X: 422.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 440.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 440.20589636189743, Y: 212.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 440.20589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 440.20589636189743, Y: 172.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 440.20589636189743, Y: 152.9433824017429, Width: 10.5, Height: 8
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Text: 'U', X: 440.20589636189743, Y: 132.9433824017429, Width: 10.5, Height: 8
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Text: 'G', X: 427.3314588535903, Y: 120.06894489343574, Width: 10.5, Height: 8
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Text: 'C', X: 407.3314588535903, Y: 120.06894489343574, Width: 10.5, Height: 8
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Text: 'U', X: 390.25242719215527, Y: 123.88456376001841, Width: 10.5, Height: 8
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Text: 'G', X: 376.4211178591529, Y: 113.16322280087894, Width: 10.5, Height: 8
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Text: 'G', X: 358.3227102285764, Y: 104.65160478563112, Width: 10.5, Height: 8
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Text: 'C', X: 340.2243025979999, Y: 96.13998677038327, Width: 10.5, Height: 8
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Text: 'A', X: 322.12589496742345, Y: 87.62836875513548, Width: 10.5, Height: 8
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Text: 'U', X: 304.027487336847, Y: 79.11675073988764, Width: 10.5, Height: 8
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Text: 'U', X: 286.8779821653907, Y: 82.60167036631807, Width: 10.5, Height: 8
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Text: 'U', X: 270.9798505961803, Y: 75.28732794634877, Width: 10.5, Height: 8
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Text: 'U', X: 262.46859935930047, Y: 59.99652041989029, Width: 10.5, Height: 8
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Text: 'G', X: 264.6289439584555, Y: 42.630372210186835, Width: 10.5, Height: 8
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Text: 'A', X: 276.62715064514083, Y: 29.890936244176913, Width: 10.5, Height: 8
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Text: 'A', X: 293.8327961803342, Y: 26.69469561716423, Width: 10.5, Height: 8
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Text: 'U', X: 309.6057698367427, Y: 34.275163575194966, Width: 10.5, Height: 8
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Text: 'A', X: 317.85886661162465, Y: 49.70683834020085, Width: 10.5, Height: 8
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Text: 'U', X: 335.95727424220115, Y: 58.218456355448694, Width: 10.5, Height: 8
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Text: 'G', X: 354.05568187277765, Y: 66.73007437069649, Width: 10.5, Height: 8
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Text: 'C', X: 372.1540895033541, Y: 75.24169238594433, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_6.svg


Text: 'U', X: 390.25249713393055, Y: 83.75331040119212, Width: 10.5, Height: 8
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Text: 'G', X: 407.3314588535903, Y: 87.56894489343571, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 427.3314588535903, Y: 87.56894489343571, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 439.47858103757454, Y: 75.11239294873499, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 456.2461876732056, Y: 70.46851187613927, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 473.07086786357513, Y: 74.9011634748392, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 485.37367778049395, Y: 87.20397339175796, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 489.80632937919387, Y: 104.02865358212753, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 485.16244830659815, Y: 120.79626021775857, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 472.70589636189743, Y: 132.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 472.70589636189743, Y: 152.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 472.70589636189743, Y: 172.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 472.70589636189743, Y: 192.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 472.70589636189743, Y: 212.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 472.70589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 490.20589636189743, Y: 232.9433824017429, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 130.95589636189743, Y: 252.94338240174287, Width: 9.0, Height: 8
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Text: '10', X: 196.31260889260864, Y: 170.55361934388614, Width: 18.0, Height: 8
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Text: '20', X: 298.95589636189743, Y: 252.9433824017429, Width: 18.0, Height: 8
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Text: '30', X: 348.95589636189743, Y: 127.26450043560976, Width: 18.0, Height: 8
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Text: '40', X: 201.6111752736904, Y: 90.18298948032921, Width: 18.0, Height: 8
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Text: '50', X: 35.23645756550776, Y: 152.38974847286218, Width: 18.0, Height: 8
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Text: '60', X: 92.94048455405701, Y: 50.4255043030401, Width: 18.0, Height: 8
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Text: '70', X: 263.5970879304561, Y: 8.0, Width: 18.0, Height: 8
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Text: '80', X: 429.9455841932397, Y: 115.62975535096689, Width: 18.0, Height: 8
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Text: '90', X: 416.45589636189743, Y: 212.9433824017429, Width: 18.0, Height: 8
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Text: '100', X: 323.46268458275205, Y: 114.23839440095975, Width: 27.0, Height: 8
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Text: '110', X: 320.93017186735085, Y: 33.21962974363527, Width: 27.0, Height: 8
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Text: '120', X: 494.46510763534786, Y: 77.24029883920556, Width: 27.0, Height: 8
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Text: '129', X: 481.95589636189743, Y: 252.9433824017429, Width: 27.0, Height: 8
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Text: 'KPNB1, -31.9 ± 1.8
 kcal/mol, AUC: 0.7', X: 189.72794818094872, Y: 265.7433824017429, Width: 126.0, Height: 23
Calculated bounding box: (4.75, 0.0, 521.4651076353479, 265.7433824017429)
Updated viewBox: -0.25 -5.0 526.7151076353479 275.7433824017429
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_4.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_4.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '..(((((.(((((((((.(((((((...........(((((((((...((....))...)))).)))))))))))).)))..))))))))))).((.(((((.......))))))).............', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_6.svg', '-title', 'KPNB1, -31.4 ± 1.6\n kcal/mol, AUC: 0.653', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 61.15561164204021, Y: 553.4340255724069, Width: 10.5, Height: 8
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Text: 'A', X: 78.65561164204021, Y: 553.4340255724069, Width: 10.5, Height: 8
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Text: 'G', X: 78.65561164204021, Y: 533.4340255724069, Width: 10.5, Height: 8
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Text: 'G', X: 78.65561164204021, Y: 513.4340255724069, Width: 10.5, Height: 8
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Text: 'G', X: 78.65561164204021, Y: 493.4340255724069, Width: 10.5, Height: 8
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Text: 'C', X: 78.65561164204021, Y: 473.4340255724069, Width: 10.5, Height: 8
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Text: 'A', X: 74.83999277545755, Y: 456.35499391097187, Width: 10.5, Height: 8
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Text: 'U', X: 85.56133373459699, Y: 442.5236845779695, Width: 10.5, Height: 8
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Text: 'C', X: 94.07295174984478, Y: 424.425276947393, Width: 10.5, Height: 8
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Text: 'C', X: 102.58456976509257, Y: 406.3268693168165, Width: 10.5, Height: 8
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Text: 'U', X: 111.09618778034036, Y: 388.22846168624005, Width: 10.5, Height: 8
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Text: 'G', X: 119.60780579558815, Y: 370.13005405566355, Width: 10.5, Height: 8
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Text: 'A', X: 128.11942381083594, Y: 352.0316464250871, Width: 10.5, Height: 8
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Text: 'A', X: 128.95997227771562, Y: 334.5519931389825, Width: 10.5, Height: 8
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Text: 'U', X: 122.22421736268197, Y: 315.7203812662669, Width: 10.5, Height: 8
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Text: 'U', X: 115.4884624476483, Y: 296.8887693935514, Width: 10.5, Height: 8
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Text: 'U', X: 103.75252320590246, Y: 283.9074316168323, Width: 10.5, Height: 8
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Text: 'U', X: 104.5929833484561, Y: 266.42769972220634, Width: 10.5, Height: 8
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Text: 'A', X: 97.85716243423968, Y: 247.59611145643333, Width: 10.5, Height: 8
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Text: 'G', X: 91.12134152002326, Y: 228.7645231906601, Width: 10.5, Height: 8
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Text: 'A', X: 84.38552060580682, Y: 209.9329349248871, Width: 10.5, Height: 8
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Text: 'G', X: 77.6496996915904, Y: 191.10134665911386, Width: 10.5, Height: 8
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Text: 'C', X: 70.91387877737398, Y: 172.26975839334085, Width: 10.5, Height: 8
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Text: 'C', X: 64.17805786315753, Y: 153.43817012756762, Width: 10.5, Height: 8
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Text: 'U', X: 47.54887547273145, Y: 150.22476057318437, Width: 10.5, Height: 8
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Text: 'U', X: 33.139570530486054, Y: 141.32376967218687, Width: 10.5, Height: 8
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Text: 'U', X: 22.822609017217136, Y: 127.89186686312854, Width: 10.5, Height: 8
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Text: 'C', X: 17.93866347307898, Y: 111.67450629304341, Width: 10.5, Height: 8
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Text: 'A', X: 19.12239475923818, Y: 94.77910786091326, Width: 10.5, Height: 8
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Text: 'G', X: 26.21997890065771, Y: 79.40120139437073, Width: 10.5, Height: 8
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Text: 'C', X: 38.30909626402337, Y: 67.53912108301597, Width: 10.5, Height: 8
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Text: 'A', X: 53.818785509320435, Y: 60.734325167444695, Width: 10.5, Height: 8
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Text: 'A', X: 70.73358748699681, Y: 59.871085922359725, Width: 10.5, Height: 8
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Text: 'U', X: 86.85545090991229, Y: 65.06157989799613, Width: 10.5, Height: 8
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Text: 'A', X: 100.08936557962616, Y: 75.63131075800356, Width: 10.5, Height: 8
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Text: 'A', X: 108.71560558908624, Y: 90.20675899253303, Width: 10.5, Height: 8
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Text: 'G', X: 128.71560558908624, Y: 90.20675899253303, Width: 10.5, Height: 8
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Text: 'A', X: 148.71560558908624, Y: 90.20675899253303, Width: 10.5, Height: 8
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Text: 'A', X: 168.71560558908624, Y: 90.20675899253303, Width: 10.5, Height: 8
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Text: 'G', X: 188.71560558908624, Y: 90.20675899253303, Width: 10.5, Height: 8
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Text: 'G', X: 205.79470719224207, Y: 86.39115575185514, Width: 10.5, Height: 8
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Text: 'G', X: 223.8931741594415, Y: 77.87966390628588, Width: 10.5, Height: 8
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Text: 'A', X: 241.99164112664093, Y: 69.36817206071669, Width: 10.5, Height: 8
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Text: 'U', X: 260.09010809384034, Y: 60.856680215147435, Width: 10.5, Height: 8
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Text: 'G', X: 265.8402254184654, Y: 44.328327497380315, Width: 10.5, Height: 8
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Text: 'U', X: 279.1677090488675, Y: 32.986878167985196, Width: 10.5, Height: 8
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Text: 'U', X: 296.40307881784867, Y: 29.954993978844414, Width: 10.5, Height: 8
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Text: 'G', X: 312.80088920129475, Y: 36.067449086116994, Width: 10.5, Height: 8
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Text: 'G', X: 330.8993605936558, Y: 27.555966650025766, Width: 10.5, Height: 8
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Text: 'U', X: 344.8962837524478, Y: 17.051805870436738, Width: 10.5, Height: 8
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Text: 'G', X: 361.8792185127234, Y: 21.274503885309514, Width: 10.5, Height: 8
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Text: 'A', X: 369.32678086277673, Y: 37.110698713570855, Width: 10.5, Height: 8
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Text: 'G', X: 361.7479417518297, Y: 52.88448866167687, Width: 10.5, Height: 8
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Text: 'C', X: 344.73051955230386, Y: 56.96598266261253, Width: 10.5, Height: 8
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Text: 'U', X: 326.6320481599427, Y: 65.47746509870376, Width: 10.5, Height: 8
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Text: 'U', X: 320.8819271393273, Y: 82.0058076728481, Width: 10.5, Height: 8
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Text: 'U', X: 307.5544484060994, Y: 93.34724984813437, Width: 10.5, Height: 8
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Text: 'G', X: 290.3190872706729, Y: 96.37913482804896, Width: 10.5, Height: 8
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Text: 'A', X: 273.92128234289027, Y: 90.26668903684657, Width: 10.5, Height: 8
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Text: 'U', X: 255.82281537569082, Y: 98.77818088241582, Width: 10.5, Height: 8
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Text: 'C', X: 237.7243484084914, Y: 107.28967272798496, Width: 10.5, Height: 8
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Text: 'C', X: 219.62588144129197, Y: 115.8011645735541, Width: 10.5, Height: 8
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Text: 'U', X: 205.7945673087459, Y: 126.52239348477661, Width: 10.5, Height: 8
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Text: 'C', X: 188.71560558908624, Y: 122.70675899253303, Width: 10.5, Height: 8
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Text: 'U', X: 168.71560558908624, Y: 122.70675899253303, Width: 10.5, Height: 8
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Text: 'U', X: 148.71560558908624, Y: 122.70675899253303, Width: 10.5, Height: 8
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Text: 'U', X: 128.71560558908624, Y: 122.70675899253303, Width: 10.5, Height: 8
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Text: 'U', X: 108.71560558908624, Y: 122.70675899253303, Width: 10.5, Height: 8
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Text: 'G', X: 94.7793887950389, Y: 142.49246114196598, Width: 10.5, Height: 8
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Text: 'G', X: 101.51520970925532, Y: 161.3240494077392, Width: 10.5, Height: 8
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Text: 'U', X: 108.25103062347173, Y: 180.15563767351222, Width: 10.5, Height: 8
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Text: 'U', X: 114.98685153768818, Y: 198.98722593928545, Width: 10.5, Height: 8
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Text: 'U', X: 121.7226724519046, Y: 217.81881420505846, Width: 10.5, Height: 8
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Text: 'U', X: 128.45849336612102, Y: 236.6504024708317, Width: 10.5, Height: 8
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Text: 'G', X: 135.19431428033747, Y: 255.4819907366047, Width: 10.5, Height: 8
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Text: 'C', X: 146.93032608133325, Y: 268.463363044912, Width: 10.5, Height: 8
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Text: 'A', X: 146.089831740811, Y: 285.9431676566217, Width: 10.5, Height: 8
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Text: 'G', X: 152.8255866558447, Y: 304.7747795293372, Width: 10.5, Height: 8
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Text: 'U', X: 171.29730787593553, Y: 336.587804841527, Width: 10.5, Height: 8
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Text: 'G', X: 170.45675227387852, Y: 354.0676065074456, Width: 10.5, Height: 8
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Text: 'U', X: 157.52933621052273, Y: 365.86302569986475, Width: 10.5, Height: 8
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Text: 'U', X: 149.01771819527494, Y: 383.96143333044125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 140.50610018002715, Y: 402.0598409610177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 131.99448216477936, Y: 420.15824859159414, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 123.48286414953157, Y: 438.25665622217065, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 114.97124613428377, Y: 456.35506385274715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 111.15561164204021, Y: 473.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 111.15561164204021, Y: 493.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 111.15561164204021, Y: 513.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 111.15561164204021, Y: 533.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 111.15561164204021, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 128.6556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 146.1556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 146.1556116420402, Y: 533.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 142.33999277545755, Y: 516.3549939109719, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 153.06133373459699, Y: 502.5236845779695, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 161.57295174984478, Y: 484.425276947393, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 170.08456976509257, Y: 466.3268693168165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 178.59618778034036, Y: 448.22846168624005, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 187.10780579558815, Y: 430.13005405566355, Width: 10.5, Height: 8
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Text: 'U', X: 183.62288616915768, Y: 412.9805488842072, Width: 10.5, Height: 8
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Text: 'U', X: 190.93722858912702, Y: 397.08241731499686, Width: 10.5, Height: 8
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Text: 'U', X: 206.22803611558544, Y: 388.571166078117, Width: 10.5, Height: 8
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Text: 'G', X: 223.59418432528895, Y: 390.73151067727207, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 236.33362029129884, Y: 402.7297173639574, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 239.52986091831153, Y: 419.93536289915073, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 231.94939296028082, Y: 435.70833655555924, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 216.51771819527494, Y: 443.96143333044125, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 208.00610018002715, Y: 462.0598409610177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 199.49448216477936, Y: 480.1582485915942, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 190.98286414953157, Y: 498.2566562221707, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 182.47124613428377, Y: 516.3550638527472, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 178.6556116420402, Y: 533.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 178.6556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 196.1556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 213.6556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 231.1556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 248.6556116420402, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 266.15561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 283.65561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 301.15561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 318.65561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 336.15561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 353.65561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 371.15561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 388.65561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 406.15561164204024, Y: 553.4340255724069, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 44.40561164204021, Y: 573.4340255724069, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 72.22454411926829, Y: 415.9136589321452, Width: 18.0, Height: 8
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Text: '20', X: 75.27557416846658, Y: 254.33193237064984, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: -4.0, Y: 89.808160135153, Width: 18.0, Height: 8
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Text: '40', X: 164.96560558908624, Y: 70.20675899253297, Width: 18.0, Height: 8
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Text: '50', X: 331.3403232972695, Y: 8.0, Width: 18.0, Height: 8
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Text: '60', X: 273.6362963087197, Y: 109.964244169822, Width: 18.0, Height: 8
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Text: '70', X: 109.860977060812, Y: 135.75664022774947, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 174.64295934529335, Y: 316.87065298682785, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 127.40561164204021, Y: 493.4340255724069, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 143.7361621345161, Y: 457.81525130156865, Width: 27.0, Height: 8
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Text: '110', X: 224.75492679184026, Y: 455.28273858616785, Width: 27.0, Height: 8
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Text: '120', X: 240.4056116420402, Y: 573.4340255724069, Width: 27.0, Height: 8
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Text: '129', X: 397.90561164204024, Y: 573.4340255724069, Width: 27.0, Height: 8
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Text: 'KPNB1, -31.4 ± 1.6
 kcal/mol, AUC: 0.653', X: 146.0471375575596, Y: 586.2340255724068, Width: 142.5, Height: 23/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_8.svg


Calculated bounding box: (-4.0, 0.0, 424.90561164204024, 586.2340255724068)
Updated viewBox: -9.0 -5.0 438.90561164204024 596.2340255724068
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_6.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_6.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '.((((....))))....(((((((...(((.(((((........))))).)))))))))).....((((((....(((((((((((.((...)).))))))..........)))))..)))))).....', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_8.svg', '-title', 'KPNB1, -31.2 ± 1.8\n kcal/mol, AUC: 0.535', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 315.9241686531544, Width: 10.5, Height: 8
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Text: 'C', X: 22.25, Y: 315.9241686531544, Width: 10.5, Height: 8
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Text: 'A', X: 22.25, Y: 295.9241686531544, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 275.9241686531544, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 255.92416865315445, Width: 10.5, Height: 8
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Text: 'G', X: 18.701265612760892, Y: 238.78772398556328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 29.749982120067017, Y: 225.2165370390295, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 47.25001787993298, Y: 225.2165370390295, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 58.29873438723911, Y: 238.78772398556328, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 255.92416865315445, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 54.75, Y: 275.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 54.75, Y: 295.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 54.75, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 72.25, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 89.75, Y: 315.9241686531544, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 315.9241686531544, Width: 10.5, Height: 8
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Text: 'U', X: 124.75, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 142.25, Y: 315.9241686531544, Width: 10.5, Height: 8
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Text: 'U', X: 142.25, Y: 295.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 142.25, Y: 275.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 142.25, Y: 255.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 142.25, Y: 235.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 142.25, Y: 215.92416865315448, Width: 10.5, Height: 8
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Text: 'C', X: 142.25, Y: 195.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 133.45286268950832, Y: 180.79607932745938, Width: 10.5, Height: 8
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Text: 'U', X: 136.5095795270139, Y: 163.56514221768026, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 149.97352309500576, Y: 152.38610222742233, Width: 10.5, Height: 8
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Text: 'U', X: 167.47272276333175, Y: 152.54957232839803, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 184.8551648527225, Y: 142.6576207004847, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 202.23760694211327, Y: 132.76566907257137, Width: 10.5, Height: 8
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Text: 'G', X: 212.99297909829536, Y: 118.96098254439374, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 230.3545619314289, Y: 116.76488557762116, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 247.73696935235114, Y: 106.87287302945549, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 265.1193767732734, Y: 96.98086048128982, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 282.5017841941957, Y: 87.08884793312416, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 299.88419161511797, Y: 77.19683538495849, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 305.46518420000046, Y: 60.61060522793605, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 319.167884338909, Y: 49.725453967738076, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 336.5866548947971, Y: 48.04113173741507, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 352.12108268889205, Y: 56.09917505848773, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.77660086220664, Y: 71.30879419262959, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 359.77032196057723, Y: 88.7798534572068, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 349.42578073659286, Y: 102.8951280177501, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 333.0689125548236, Y: 109.11633146551304, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 315.95871200588715, Y: 105.44324744395715, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 298.5763045849649, Y: 115.33525999212281, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 281.1938971640426, Y: 125.22727254028848, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 263.8114897431204, Y: 135.11928508845415, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 246.4290823221981, Y: 145.01129763661982, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 235.67368870736473, Y: 158.81606160381614, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 218.3120283374724, Y: 161.01213746783134, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 200.92958624808165, Y: 170.90408909574467, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 183.54714415869086, Y: 180.796040723658, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.75, Y: 195.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 174.75, Y: 215.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 235.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 255.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 275.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.75, Y: 295.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 174.75, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.25, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.75, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 227.25, Y: 315.9241686531544, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 244.75, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 262.25, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.75, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.75, Y: 295.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.75, Y: 275.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.75, Y: 255.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 279.75, Y: 235.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 279.75, Y: 215.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 267.2402124297059, Y: 203.6867077566285, Width: 10.5, Height: 8
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Text: 'U', X: 262.6489076614384, Y: 186.79972594303098, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 267.24021769747776, Y: 169.9127455616587, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 279.7500090851589, Y: 157.67528856747134, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 296.7339389996895, Y: 153.45671547859382, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 306.8607377848471, Y: 136.21003619344077, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 316.9875365700048, Y: 118.96335690828772, Width: 10.5, Height: 8
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Text: 'G', X: 327.1143353551625, Y: 101.71667762313461, Width: 10.5, Height: 8
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Text: 'U', X: 337.2411341403202, Y: 84.46999833798151, Width: 10.5, Height: 8
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Text: 'U', X: 330.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'G', X: 310.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'U', X: 290.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'U', X: 270.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'A', X: 250.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'G', X: 230.94249059063225, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'G', X: 214.7669541605495, Y: 80.14579558968484, Width: 10.5, Height: 8
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Text: 'A', X: 198.59141773046673, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'G', X: 178.59141773046673, Y: 73.46741843819558, Width: 10.5, Height: 8
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Text: 'U', X: 161.11666984354528, Y: 72.5272172996385, Width: 10.5, Height: 8
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Text: 'U', X: 152.6395918850402, Y: 57.21741843819552, Width: 10.5, Height: 8
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Text: 'U', X: 161.11666984354528, Y: 41.90761957675272, Width: 10.5, Height: 8
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Text: 'U', X: 178.59141773046673, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'U', X: 198.59141773046673, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'G', X: 214.7669541605495, Y: 34.289041286706265, Width: 10.5, Height: 8
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Text: 'C', X: 230.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'U', X: 250.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'G', X: 270.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'G', X: 290.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'C', X: 310.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'A', X: 330.94249059063225, Y: 40.96741843819552, Width: 10.5, Height: 8
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Text: 'U', X: 340.77603377522036, Y: 25.967405645114013, Width: 10.5, Height: 8
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Text: 'U', X: 355.75674825598077, Y: 16.104487770483615, Width: 10.5, Height: 8
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Text: 'U', X: 373.42199976957903, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 390.8678511437476, Y: 17.1642796719467, Width: 10.5, Height: 8
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Text: 'G', X: 405.226431730378, Y: 27.912773468428554, Width: 10.5, Height: 8
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Text: 'A', X: 414.13737797198456, Y: 43.47856906116863, Width: 10.5, Height: 8
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Text: 'A', X: 416.1358464152397, Y: 61.302852475575094, Width: 10.5, Height: 8
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Text: 'U', X: 410.8933148879284, Y: 78.45554376705803, Width: 10.5, Height: 8
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Text: 'A', X: 399.2715872634472, Y: 92.11696398525424, Width: 10.5, Height: 8
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Text: 'U', X: 383.18112413324155, Y: 100.0413536533145, Width: 10.5, Height: 8
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Text: 'G', X: 365.266987978694, Y: 100.92604636386278, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 355.1401891935363, Y: 118.17272564901589, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 345.0133904083786, Y: 135.419404934169, Width: 10.5, Height: 8
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Text: 'G', X: 334.8865916232209, Y: 152.66608421932204, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_7.svg


Text: 'C', X: 324.7597928380632, Y: 169.9127635044751, Width: 10.5, Height: 8
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Text: 'U', X: 329.3510923385609, Y: 186.7997398145411, Width: 10.5, Height: 8
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Text: 'U', X: 324.7597840584465, Y: 203.6867137375669, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 312.25, Y: 215.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 312.25, Y: 235.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 312.25, Y: 255.92416865315448, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 312.25, Y: 275.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 312.25, Y: 295.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 312.25, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 329.75, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 347.25, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 364.75, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 382.25, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 399.75, Y: 315.9241686531545, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 335.9241686531544, Width: 9.0, Height: 8
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Text: '10', X: 70.85671253071119, Y: 253.53440559529767, Width: 18.0, Height: 8
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Text: '20', X: 118.5, Y: 275.9241686531545, Width: 18.0, Height: 8
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Text: '30', X: 188.59564008412536, Y: 115.38323565027778, Width: 18.0, Height: 8
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Text: '40', X: 362.2357644101668, Y: 41.684925138087806, Width: 18.0, Height: 8
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Text: '50', X: 241.8156707954194, Y: 176.19848635899933, Width: 18.0, Height: 8
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Text: '60', X: 185.14213562373095, Y: 330.0663042768854, Width: 18.0, Height: 8
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Text: '70', X: 256.0, Y: 235.92416865315448, Width: 18.0, Height: 8
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Text: '80', X: 316.2444548551671, Y: 74.34319955282382, Width: 18.0, Height: 8
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Text: '90', X: 146.75255260590808, Y: 89.47833865681406, Width: 18.0, Height: 8
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Text: '100', X: 302.69249059063225, Y: 20.967418438195523, Width: 27.0, Height: 8
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Text: '110', X: 403.31170732364996, Y: 107.89520688190791, Width: 27.0, Height: 8
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Text: '120', X: 324.0, Y: 235.92416865315448, Width: 27.0, Height: 8
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Text: '129', X: 391.5, Y: 335.9241686531545, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'KPNB1, -31.2 ± 1.8
 kcal/mol, AUC: 0.535', X: 144.44292320761986, Y: 348.7241686531545, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 430.31170732364996, 348.7241686531545)
Updated viewBox: -0.25 0.0 435.56170732364996 353.7241686531545
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_8.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_8.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '..(((((.(.((((...)))))))))).((((.(((....((((((((((((((......((((...(((......))).....))))...))))))))))))))...)))))))..............', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_7.svg', '-title', 'KPNB1, -31.1 ± 1.6\n kcal/mol, AUC: 0.612', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 22.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'A', X: 39.75, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 443.08699820922857, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 423.08699820922857, Width: 10.5, Height: 8
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Text: 'G', X: 39.75, Y: 403.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 39.75, Y: 383.08699820922857, Width: 10.5, Height: 8
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Text: 'A', X: 35.93438113341733, Y: 366.00796654779356, Width: 10.5, Height: 8
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Text: 'U', X: 46.6557220925568, Y: 352.17665721479125, Width: 10.5, Height: 8
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Text: 'C', X: 49.898668859490954, Y: 335.87341135979875, Width: 10.5, Height: 8
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Text: 'C', X: 64.13769020105582, Y: 327.2965354497743, Width: 10.5, Height: 8
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Text: 'U', X: 78.27982582478677, Y: 313.15439982604335, Width: 10.5, Height: 8
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Text: 'G', X: 92.42196144851772, Y: 299.0122642023124, Width: 10.5, Height: 8
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Text: 'A', X: 106.56409707224867, Y: 284.87012857858144, Width: 10.5, Height: 8
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Text: 'A', X: 119.58543240336917, Y: 273.1784384489671, Width: 10.5, Height: 8
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Text: 'U', X: 136.40529430600347, Y: 278.00990173338937, Width: 10.5, Height: 8
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Text: 'U', X: 141.23675759042584, Y: 294.8297636360237, Width: 10.5, Height: 8
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Text: 'U', X: 129.54506746081148, Y: 307.85109896714425, Width: 10.5, Height: 8
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Text: 'U', X: 115.40293183708053, Y: 321.9932345908752, Width: 10.5, Height: 8
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Text: 'A', X: 101.26079621334958, Y: 336.13537021460616, Width: 10.5, Height: 8
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Text: 'G', X: 87.11866058961863, Y: 350.2775058383371, Width: 10.5, Height: 8
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Text: 'A', X: 76.06563449224356, Y: 366.0080364895689, Width: 10.5, Height: 8
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Text: 'G', X: 72.25, Y: 383.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 72.25, Y: 403.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 72.25, Y: 423.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 72.25, Y: 443.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 72.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 89.75, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 107.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'A', X: 107.25, Y: 443.08699820922857, Width: 10.5, Height: 8
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Text: 'G', X: 107.25, Y: 423.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 107.25, Y: 403.08699820922857, Width: 10.5, Height: 8
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Text: 'A', X: 103.43438113341733, Y: 386.00796654779356, Width: 10.5, Height: 8
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Text: 'A', X: 114.15572209255677, Y: 372.17665721479125, Width: 10.5, Height: 8
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Text: 'U', X: 122.66734010780456, Y: 354.07824958421475, Width: 10.5, Height: 8
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Text: 'A', X: 131.17895812305235, Y: 335.97984195363824, Width: 10.5, Height: 8
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Text: 'A', X: 123.95014043855281, Y: 319.27366779181864, Width: 10.5, Height: 8
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Text: 'G', X: 125.80475581391426, Y: 301.16531441415736, Width: 10.5, Height: 8
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Text: 'A', X: 136.2699887818273, Y: 286.2713237075641, Width: 10.5, Height: 8
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Text: 'A', X: 152.677833845324, Y: 278.38876824546503, Width: 10.5, Height: 8
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Text: 'G', X: 170.84527654528756, Y: 279.52722596726346, Width: 10.5, Height: 8
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Text: 'G', X: 184.9874121690185, Y: 265.3850903435325, Width: 10.5, Height: 8
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Text: 'G', X: 199.12954779274946, Y: 251.2429547198016, Width: 10.5, Height: 8
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Text: 'A', X: 213.2716834164804, Y: 237.10081909607067, Width: 10.5, Height: 8
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Text: 'U', X: 227.41381904021137, Y: 222.95868347233966, Width: 10.5, Height: 8
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Text: 'G', X: 241.55595466394232, Y: 208.8165478486087, Width: 10.5, Height: 8
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Text: 'U', X: 255.69809028767327, Y: 194.67441222487776, Width: 10.5, Height: 8
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Text: 'U', X: 269.8402259114042, Y: 180.5322766011468, Width: 10.5, Height: 8
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Text: 'G', X: 283.98236153513517, Y: 166.39014097741585, Width: 10.5, Height: 8
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Text: 'G', X: 298.1244971588661, Y: 152.2480053536849, Width: 10.5, Height: 8
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Text: 'U', X: 312.26663278259707, Y: 138.10586972995395, Width: 10.5, Height: 8
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Text: 'G', X: 326.408768406328, Y: 123.963734106223, Width: 10.5, Height: 8
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Text: 'A', X: 340.550904030059, Y: 109.82159848249205, Width: 10.5, Height: 8
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Text: 'G', X: 354.6930396537899, Y: 95.6794628587611, Width: 10.5, Height: 8
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Text: 'C', X: 351.76790930479825, Y: 77.55699394932685, Width: 10.5, Height: 8
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Text: 'U', X: 356.9469692250792, Y: 59.94570196735833, Width: 10.5, Height: 8
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Text: 'U', X: 369.21679782713, Y: 46.29170720361594, Width: 10.5, Height: 8
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Text: 'U', X: 386.1764749880562, Y: 39.26677891009115, Width: 10.5, Height: 8
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Text: 'G', X: 404.50738628429076, Y: 40.245532189312144, Width: 10.5, Height: 8
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Text: 'A', X: 420.6225986599991, Y: 49.03644778541616, Width: 10.5, Height: 8
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Text: 'U', X: 431.36873981207594, Y: 63.919347948746235, Width: 10.5, Height: 8
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Text: 'C', X: 451.36873981207594, Y: 63.919347948746235, Width: 10.5, Height: 8
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Text: 'C', X: 471.36873981207594, Y: 63.919347948746235, Width: 10.5, Height: 8
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Text: 'U', X: 491.36873981207594, Y: 63.919347948746235, Width: 10.5, Height: 8
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Text: 'C', X: 502.10058623631016, Y: 50.09626515913362, Width: 10.5, Height: 8
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Text: 'U', X: 517.8177351897345, Y: 42.400722666385036, Width: 10.5, Height: 8
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Text: 'U', X: 535.3177393463576, Y: 42.40072555532754, Width: 10.5, Height: 8
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Text: 'U', X: 551.034885758984, Y: 50.09627323732491, Width: 10.5, Height: 8
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Text: 'U', X: 568.997338891173, Y: 41.3013725855883, Width: 10.5, Height: 8
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Text: 'G', X: 586.9597920233618, Y: 32.506471933851685, Width: 10.5, Height: 8
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Text: 'G', X: 596.6302164915224, Y: 17.9211353787814, Width: 10.5, Height: 8
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Text: 'U', X: 613.4240123222088, Y: 13.0, Width: 10.5, Height: 8
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Text: 'U', X: 629.4370127679902, Y: 20.059247023761145, Width: 10.5, Height: 8
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Text: 'G', X: 565.3265993180561, Y: 79.28525957713191, Width: 10.5, Height: 8
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Text: 'U', X: 561.7667186773606, Y: 96.41935569639077, Width: 10.5, Height: 8
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Text: 'U', X: 551.0348725202213, Y: 110.24243343108844, Width: 10.5, Height: 8
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Text: 'G', X: 535.317726876488, Y: 117.93797323110743, Width: 10.5, Height: 8
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Text: 'U', X: 517.8177268764881, Y: 117.9379713051461, Width: 10.5, Height: 8
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Text: 'U', X: 502.1005829266194, Y: 110.24242804562869, Width: 10.5, Height: 8
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Text: 'A', X: 491.36873981207594, Y: 96.41934794874624, Width: 10.5, Height: 8
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Text: 'G', X: 471.36873981207594, Y: 96.41934794874624, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)

Text: 'G', X: 451.36873981207594, Y: 96.41934794874624, Width: 10.5, Height: 8
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Text: 'A', X: 431.36873981207594, Y: 96.41934794874624, Width: 10.5, Height: 8
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Text: 'G', X: 422.38609708174073, Y: 109.654465139281, Width: 10.5, Height: 8
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Text: 'U', X: 409.0649217147097, Y: 118.50898287368307, Width: 10.5, Height: 8
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Text: 'U', X: 393.38433874517466, Y: 121.66738677495368, Width: 10.5, Height: 8
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Text: 'U', X: 377.67401004235273, Y: 118.66043324732391, Width: 10.5, Height: 8
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Text: 'U', X: 363.5318744186218, Y: 132.80256887105486, Width: 10.5, Height: 8
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Text: 'U', X: 349.38973879489083, Y: 146.9447044947858, Width: 10.5, Height: 8
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Text: 'G', X: 335.2476031711599, Y: 161.08684011851676, Width: 10.5, Height: 8
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Text: 'C', X: 321.10546754742893, Y: 175.2289757422477, Width: 10.5, Height: 8
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Text: 'U', X: 306.963331923698, Y: 189.37111136597866, Width: 10.5, Height: 8
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Text: 'G', X: 292.821196299967, Y: 203.51324698970961, Width: 10.5, Height: 8
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Text: 'G', X: 278.6790606762361, Y: 217.65538261344057, Width: 10.5, Height: 8
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Text: 'C', X: 264.5369250525051, Y: 231.79751823717152, Width: 10.5, Height: 8
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Text: 'A', X: 250.39478942877417, Y: 245.9396538609025, Width: 10.5, Height: 8
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Text: 'U', X: 236.25265380504322, Y: 260.0817894846334, Width: 10.5, Height: 8
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Text: 'U', X: 222.11051818131227, Y: 274.22392510836437, Width: 10.5, Height: 8
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Text: 'U', X: 207.96838255758132, Y: 288.3660607320953, Width: 10.5, Height: 8
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Text: 'U', X: 193.82624693385037, Y: 302.50819635582627, Width: 10.5, Height: 8
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Text: 'G', X: 195.24089200824176, Y: 319.0666205081567, Width: 10.5, Height: 8
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Text: 'A', X: 189.07781597633837, Y: 334.50032145510886, Width: 10.5, Height: 8
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Text: 'A', X: 176.6466289879587, Y: 345.52974669647654, Width: 10.5, Height: 8
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Text: 'U', X: 160.58887052273914, Y: 349.8112212284159, Width: 10.5, Height: 8
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Text: 'A', X: 152.07725250749135, Y: 367.9096288589924, Width: 10.5, Height: 8
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Text: 'U', X: 143.56563449224356, Y: 386.0080364895689, Width: 10.5, Height: 8
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Text: 'G', X: 139.75, Y: 403.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 139.75, Y: 423.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 139.75, Y: 443.08699820922857, Width: 10.5, Height: 8
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Text: 'G', X: 139.75, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 157.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 174.75, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 192.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'U', X: 209.75, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'C', X: 227.25, Y: 463.08699820922857, Width: 10.5, Height: 8
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Text: 'A', X: 244.75, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'G', X: 262.25, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'A', X: 279.75, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'A', X: 297.25, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'A', X: 314.75, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'A', X: 332.25, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'A', X: 349.75, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'C', X: 367.25, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: 'C', X: 384.75, Y: 463.0869982092286, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 483.08699820922857, Width: 9.0, Height: 8
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Text: '10', X: 29.78441392783958, Y: 324.3751001563253, Width: 18.0, Height: 8
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Text: '20', X: 111.65293183708053, Y: 350.2775058383371, Width: 18.0, Height: 8
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Text: '30', X: 83.5, Y: 443.08699820922857, Width: 18.0, Height: 8
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Text: '40', X: 145.09888452311276, Y: 258.7587110094828, Width: 18.0, Height: 8
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Text: '50', X: 280.23236153513517, Y: 138.10586972995395, Width: 18.0, Height: 8
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Text: '60', X: 430.09643050475233, Y: 34.032106035719494, Width: 18.0, Height: 8
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Text: '70', X: 572.8371449779886, Y: 15.406524762234199, Width: 18.0, Height: 8
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Text: '80', X: 576.1750580997129, Y: 104.80235691448951, Width: 18.0, Height: 8
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Text: '90', X: 412.9685903620115, Y: 136.98657352390882, Width: 18.0, Height: 8
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Text: '100', X: 270.4290606762361, Y: 245.93965386090247, Width: 27.0, Height: 8
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Text: '110', X: 161.92566013806783, Y: 376.4212468742403, Width: 27.0, Height: 8
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Text: '120', X: 219.0, Y: 483.08699820922857, Width: 27.0, Height: 8
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Text: '129', X: 376.5, Y: 483.0869982092286, Width: 27.0, Height: 8
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Text: 'KPNB1, -31.1 ± 1.6
 kcal/mol, AUC: 0.612', X: 254.9412700907926, Y: 495.88699820922864, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 647.6325401815852, 495.88699820922864)
Updated viewBox: -0.25 0.0 652.8825401815852 500.88699820922864
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_7.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_7.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '.((((....))))..(((((((((.....(((.(((....((((((((((((((......((((...(((......))).....))))...))))))))))))))...))))))))))).)))).....', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_3.svg', '-title', 'KPNB1, -31.1 ± 1.7\n kcal/mol, AUC: 0.701', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_3.svg


Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 22.25, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 22.25, Y: 250.73627542305655, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 230.73627542305655, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 210.73627542305655, Width: 10.5, Height: 8
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Text: 'G', X: 18.701265612760892, Y: 193.59983075546538, Width: 10.5, Height: 8
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Text: 'C', X: 29.749982120067045, Y: 180.02864380893158, Width: 10.5, Height: 8
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Text: 'A', X: 47.250017879932955, Y: 180.02864380893158, Width: 10.5, Height: 8
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Text: 'U', X: 58.29873438723911, Y: 193.59983075546538, Width: 10.5, Height: 8
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Text: 'C', X: 54.75, Y: 210.73627542305655, Width: 10.5, Height: 8
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Text: 'C', X: 54.75, Y: 230.73627542305655, Width: 10.5, Height: 8
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Text: 'U', X: 54.75, Y: 250.73627542305655, Width: 10.5, Height: 8
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Text: 'G', X: 54.75, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 72.25, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 89.75, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 250.73627542305655, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 230.73627542305655, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 210.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 103.43439675932206, Y: 193.65717381990072, Width: 10.5, Height: 8
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Text: 'G', X: 94.92290491375286, Y: 175.55870685270128, Width: 10.5, Height: 8
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Text: 'A', X: 86.41141306818366, Y: 157.46023988550184, Width: 10.5, Height: 8
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Text: 'G', X: 77.89992122261452, Y: 139.3617729183024, Width: 10.5, Height: 8
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Text: 'C', X: 69.38842937704533, Y: 121.26330595110295, Width: 10.5, Height: 8
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Text: 'C', X: 53.324964097062605, Y: 114.31965108826012, Width: 10.5, Height: 8
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Text: 'U', X: 43.67264484110166, Y: 99.72232281776843, Width: 10.5, Height: 8
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Text: 'U', X: 43.573218822693946, Y: 82.22262641690605, Width: 10.5, Height: 8
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Text: 'U', X: 53.059048358916016, Y: 67.51656312093081, Width: 10.5, Height: 8
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Text: 'C', X: 69.04257721347199, Y: 60.39083052623806, Width: 10.5, Height: 8
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Text: 'A', X: 86.32130369639873, Y: 63.164793536751745, Width: 10.5, Height: 8
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Text: 'G', X: 103.2236820937672, Y: 52.47322655561322, Width: 10.5, Height: 8
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Text: 'C', X: 120.12606049113566, Y: 41.7816595744747, Width: 10.5, Height: 8
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Text: 'A', X: 133.7366530969001, Y: 29.03307034771558, Width: 10.5, Height: 8
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Text: 'A', X: 152.0543422002987, Y: 32.53121618000455, Width: 10.5, Height: 8
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Text: 'U', X: 172.0543422002987, Y: 32.53121618000455, Width: 10.5, Height: 8
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Text: 'A', X: 192.0543422002987, Y: 32.53121618000455, Width: 10.5, Height: 8
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Text: 'A', X: 203.49794922247887, Y: 19.291277793687073, Width: 10.5, Height: 8
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Text: 'G', X: 219.82804211487345, Y: 13.0, Width: 10.5, Height: 8
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Text: 'A', X: 237.19679076441497, Y: 15.139785152912737, Width: 10.5, Height: 8
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Text: 'A', X: 251.51162848943238, Y: 25.20643956527806, Width: 10.5, Height: 8
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Text: 'G', X: 259.39957608981047, Y: 40.82797575111027, Width: 10.5, Height: 8
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Text: 'G', X: 278.80154847153744, Y: 45.682197387861436, Width: 10.5, Height: 8
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Text: 'G', X: 298.2035208532644, Y: 50.536419024612655, Width: 10.5, Height: 8
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Text: 'A', X: 317.6054932349914, Y: 55.390640661363875, Width: 10.5, Height: 8
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Text: 'U', X: 337.0074656167184, Y: 60.24486229811504, Width: 10.5, Height: 8
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Text: 'G', X: 356.40943799844536, Y: 65.0990839348662, Width: 10.5, Height: 8
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Text: 'U', X: 375.81141038017233, Y: 69.95330557161742, Width: 10.5, Height: 8
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Text: 'U', X: 395.2133827618993, Y: 74.80752720836864, Width: 10.5, Height: 8
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Text: 'G', X: 414.6153551436263, Y: 79.6617488451198, Width: 10.5, Height: 8
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Text: 'G', X: 434.01732752535327, Y: 84.51597048187097, Width: 10.5, Height: 8
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Text: 'U', X: 453.41929990708024, Y: 89.37019211862219, Width: 10.5, Height: 8
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Text: 'G', X: 472.8212722888072, Y: 94.2244137553734, Width: 10.5, Height: 8
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Text: 'A', X: 492.2232446705342, Y: 99.07863539212457, Width: 10.5, Height: 8
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Text: 'G', X: 511.6252170522612, Y: 103.93285702887573, Width: 10.5, Height: 8
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Text: 'C', X: 524.3832355480384, Y: 92.79324683609582, Width: 10.5, Height: 8
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Text: 'U', X: 540.529453718113, Y: 87.67879769762231, Width: 10.5, Height: 8
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Text: 'U', X: 557.3743659542569, Y: 89.44143292429078, Width: 10.5, Height: 8
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Text: 'U', X: 572.1120838774074, Y: 97.78754708618243, Width: 10.5, Height: 8
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Text: 'G', X: 582.2877183866441, Y: 111.32691241547724, Width: 10.5, Height: 8
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Text: 'A', X: 586.206295105206, Y: 127.80425163291233, Width: 10.5, Height: 8
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Text: 'U', X: 583.2150894167257, Y: 144.47490368119418, Width: 10.5, Height: 8
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Text: 'C', X: 597.3572250404567, Y: 158.61703930492513, Width: 10.5, Height: 8
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Text: 'C', X: 611.4993606641876, Y: 172.75917492865608, Width: 10.5, Height: 8
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Text: 'U', X: 625.6414962879186, Y: 186.90131055238703, Width: 10.5, Height: 8
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Text: 'C', X: 643.0044532465853, Y: 184.71547635617756, Width: 10.5, Height: 8
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Text: 'U', X: 659.5597261340026, Y: 190.38760868053123, Width: 10.5, Height: 8
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Text: 'U', X: 671.9340957011526, Y: 202.76198233326303, Width: 10.5, Height: 8
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Text: 'U', X: 677.6062225595379, Y: 219.31725709341777, Width: 10.5, Height: 8
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Text: 'U', X: 733.6062881717751, Y: 279.07585000125755, Width: 10.5, Height: 8
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Text: 'G', X: 667.0722599550943, Y: 250.0627548426523, Width: 10.5, Height: 8
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Text: 'U', X: 652.4394086584138, Y: 259.66117465683186, Width: 10.5, Height: 8
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Text: 'U', X: 635.0764554629762, Y: 261.84700546754135, Width: 10.5, Height: 8
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Text: 'G', X: 618.5211868199115, Y: 256.1748735794453, Width: 10.5, Height: 8
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Text: 'U', X: 606.1468195110073, Y: 243.80050354682055, Width: 10.5, Height: 8
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Text: 'U', X: 600.4746912668892, Y: 227.245233655264, Width: 10.5, Height: 8
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Text: 'A', X: 602.6605258993558, Y: 209.88228094094984, Width: 10.5, Height: 8
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Text: 'G', X: 588.5183902756248, Y: 195.7401453172189, Width: 10.5, Height: 8
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Text: 'G', X: 574.3762546518939, Y: 181.59800969348794, Width: 10.5, Height: 8
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Text: 'A', X: 560.2341190281629, Y: 167.455874069757, Width: 10.5, Height: 8
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Text: 'G', X: 541.9823484593581, Y: 170.37264595110202, Width: 10.5, Height: 8
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Text: 'U', X: 524.2744660610851, Y: 165.07494946366296, Width: 10.5, Height: 8
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Text: 'U', X: 510.6233519905254, Y: 152.61373877863474, Width: 10.5, Height: 8
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Text: 'U', X: 503.7371068925405, Y: 135.4610621491821, Width: 10.5, Height: 8
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Text: 'U', X: 484.33513451081353, Y: 130.6068405124309, Width: 10.5, Height: 8
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Text: 'U', X: 464.93316212908655, Y: 125.75261887567973, Width: 10.5, Height: 8
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Text: 'G', X: 445.5311897473596, Y: 120.89839723892851, Width: 10.5, Height: 8
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Text: 'C', X: 426.1292173656326, Y: 116.04417560217735, Width: 10.5, Height: 8
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Text: 'U', X: 406.7272449839056, Y: 111.18995396542613, Width: 10.5, Height: 8
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Text: 'G', X: 387.32527260217864, Y: 106.33573232867496, Width: 10.5, Height: 8
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Text: 'G', X: 367.92330022045167, Y: 101.48151069192375, Width: 10.5, Height: 8
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Text: 'C', X: 348.5213278387247, Y: 96.62728905517258, Width: 10.5, Height: 8
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Text: 'A', X: 329.1193554569977, Y: 91.77306741842136, Width: 10.5, Height: 8
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Text: 'U', X: 309.71738307527073, Y: 86.9188457816702, Width: 10.5, Height: 8
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Text: 'U', X: 290.31541069354375, Y: 82.06462414491898, Width: 10.5, Height: 8
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Text: 'U', X: 270.9134383118168, Y: 77.21040250816782, Width: 10.5, Height: 8
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Text: 'U', X: 251.5114659300898, Y: 72.3561808714166, Width: 10.5, Height: 8
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Text: 'G', X: 237.19661678463672, Y: 82.42271423414485, Width: 10.5, Height: 8
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Text: 'A', X: 219.82791875110556, Y: 84.56241716212611, Width: 10.5, Height: 8
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Text: 'A', X: 203.49789838591053, Y: 78.27111881660824, Width: 10.5, Height: 8
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Text: 'U', X: 192.0543422002987, Y: 65.03121618000455, Width: 10.5, Height: 8
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Text: 'A', X: 172.0543422002987, Y: 65.03121618000455, Width: 10.5, Height: 8
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Text: 'U', X: 152.0543422002987, Y: 65.03121618000455, Width: 10.5, Height: 8
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Text: 'G', X: 137.49985683548576, Y: 69.24802447019852, Width: 10.5, Height: 8
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Text: 'C', X: 120.59747843811726, Y: 79.93959145133704, Width: 10.5, Height: 8
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Text: 'U', X: 103.6951000407488, Y: 90.6311584324755, Width: 10.5, Height: 8
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Text: 'G', X: 98.7984381987444, Y: 107.43213170205303, Width: 10.5, Height: 8
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Text: 'C', X: 107.3099300443136, Y: 125.53059866925247, Width: 10.5, Height: 8
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Text: 'U', X: 115.82142188988274, Y: 143.6290656364519, Width: 10.5, Height: 8
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Text: 'U', X: 124.33291373545197, Y: 161.72753260365135, Width: 10.5, Height: 8
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Text: 'U', X: 132.84440558102114, Y: 179.8259995708508, Width: 10.5, Height: 8
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Text: 'C', X: 143.56563449224356, Y: 193.65731370339685, Width: 10.5, Height: 8
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Text: 'A', X: 139.75, Y: 210.73627542305655, Width: 10.5, Height: 8
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Text: 'G', X: 139.75, Y: 230.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 139.75, Y: 250.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 139.75, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 157.25, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 174.75, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: 'A', X: 192.25, Y: 270.73627542305655, Width: 10.5, Height: 8/disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_5.svg


Warning: Font Verdana not found. Using default font.
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Text: 'C', X: 227.25, Y: 270.73627542305655, Width: 10.5, Height: 8
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Text: '1', X: 5.5, Y: 290.73627542305655, Width: 9.0, Height: 8
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Text: '10', X: 70.85671253071119, Y: 208.34651236519977, Width: 18.0, Height: 8
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Text: '20', X: 80.16559856551055, Y: 189.29638065015965, Width: 18.0, Height: 8
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Text: '30', X: 75.76878244964671, Y: 44.357196542784436, Width: 18.0, Height: 8
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Text: '40', X: 262.89297960627306, Y: 12.128128765374072, Width: 18.0, Height: 8
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Text: '50', X: 435.12154916210443, Y: 65.11399810014399, Width: 18.0, Height: 8
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Text: '60', X: 602.448472745736, Y: 127.24493670419, Width: 18.0, Height: 8
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Text: '70', X: 716.4537547123265, Y: 212.8560764774204, Width: 18.0, Height: 8
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Text: '80', X: 655.6016165910333, Y: 278.42873660547696, Width: 18.0, Height: 8
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Text: '90', X: 510.6689159510122, Y: 182.47805642845063, Width: 18.0, Height: 8
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Text: '100', X: 335.4171062019735, Y: 116.02926143689956, Width: 27.0, Height: 8
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Text: '110', X: 163.8043422002987, Y: 85.03121618000455, Width: 27.0, Height: 8
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Text: '120', X: 154.8344630859885, Y: 189.2966566052056, Width: 27.0, Height: 8
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Text: '129', X: 219.0, Y: 290.73627542305655, Width: 27.0, Height: 8
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Text: 'KPNB1, -31.1 ± 1.7
 kcal/mol, AUC: 0.701', X: 313.51714157467205, Y: 303.53627542305657, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 4.128128765374072, 764.7842831493441, 303.53627542305657)
Updated viewBox: -0.25 -0.8718712346259281 770.0342831493441 309.4081466576825
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_3.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_3.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '.....(((((((...(((((..((......))..))))).))))))).(((....((((.((((...(((......))).....))))......((.(((((.......)))))))...))))...)))', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_5.svg', '-title', 'KPNB1, -28.8 ± 1.3\n kcal/mol, AUC: 0.691', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
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Text: 'G', X: 131.54494139321872, Y: 197.73731251869552, Width: 10.5, Height: 8
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Text: 'U', X: 182.36321406818686, Y: 128.75634028710422, Width: 10.5, Height: 8
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Text: 'U', X: 194.22571116096378, Y: 112.65413041628656, Width: 10.5, Height: 8
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Text: 'G', X: 206.08821404312286, Y: 79.05191349772804, Width: 10.5, Height: 8
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Text: 'C', X: 245.0440030912473, Y: 43.673168363791774, Width: 10.5, Height: 8
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Text: 'U', X: 232.25429929381946, Y: 115.82847832123136, Width: 10.5, Height: 8
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Text: 'A', X: 220.39180220104254, Y: 131.93068819204908, Width: 10.5, Height: 8
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Text: 'G', X: 174.42462528955855, Y: 231.82675350176206, Width: 10.5, Height: 8
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Text: 'G', X: 174.42462528955855, Y: 251.82675350176203, Width: 10.5, Height: 8
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Text: 'A', X: 174.42462528955855, Y: 271.826753501762, Width: 10.5, Height: 8
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Text: 'U', X: 174.42462528955855, Y: 291.826753501762, Width: 10.5, Height: 8
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Text: 'G', X: 174.42462528955855, Y: 311.826753501762, Width: 10.5, Height: 8
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Text: 'U', X: 174.42462528955855, Y: 331.826753501762, Width: 10.5, Height: 8
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Text: 'U', X: 191.92462528955855, Y: 331.826753501762, Width: 10.5, Height: 8
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Text: 'G', X: 209.42462528955855, Y: 331.826753501762, Width: 10.5, Height: 8
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Text: 'G', X: 209.42462528955855, Y: 311.826753501762, Width: 10.5, Height: 8
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Text: 'U', X: 209.42462528955855, Y: 291.826753501762, Width: 10.5, Height: 8
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Text: 'G', X: 196.18468690324102, Y: 280.38314647958185, Width: 10.5, Height: 8
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Text: 'A', X: 189.893409109554, Y: 264.05305358718726, Width: 10.5, Height: 8
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Text: 'G', X: 192.03319426246676, Y: 246.68430493764575, Width: 10.5, Height: 8
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Text: 'U', X: 217.72138486066427, Y: 224.48151961225025, Width: 10.5, Height: 8
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Text: 'U', X: 222.5756064974155, Y: 205.07954723052327, Width: 10.5, Height: 8
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Text: 'U', X: 227.42982813416668, Y: 185.6775748487963, Width: 10.5, Height: 8
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Text: 'G', X: 232.28404977091787, Y: 166.27560246706932, Width: 10.5, Height: 8
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Text: 'A', X: 218.96222818938472, Y: 154.23375299100437, Width: 10.5, Height: 8
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Text: 'U', X: 210.51380036950928, Y: 138.38758195738356, Width: 10.5, Height: 8
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Text: 'C', X: 190.51380036950928, Y: 138.38758195738356, Width: 10.5, Height: 8
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Text: 'C', X: 170.51380036950928, Y: 138.38758195738356, Width: 10.5, Height: 8
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Text: 'U', X: 150.51380036950928, Y: 138.38758195738356, Width: 10.5, Height: 8
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Text: 'C', X: 139.78195394527506, Y: 152.21066474699606, Width: 10.5, Height: 8
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Text: 'U', X: 124.06480499185062, Y: 159.90620723974476, Width: 10.5, Height: 8
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Text: 'U', X: 106.56480083522763, Y: 159.90620435080214, Width: 10.5, Height: 8
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Text: 'U', X: 90.84765442260118, Y: 152.21065666880477, Width: 10.5, Height: 8
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Text: 'U', X: 72.88520129041228, Y: 161.00555732054139, Width: 10.5, Height: 8
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Text: 'G', X: 54.922748158223385, Y: 169.800457972278, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 45.252323690062696, Y: 184.3857945273484, Width: 10.5, Height: 8
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Text: 'U', X: 28.458527859376318, Y: 189.30692990612968, Width: 10.5, Height: 8
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Text: 'U', X: 12.445527413595016, Y: 182.24768288236865, Width: 10.5, Height: 8
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Text: 'U', X: 4.75, Y: 166.53055815659005, Width: 10.5, Height: 8
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Text: 'U', X: 8.99392200199668, Y: 149.5529765308095, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 23.17984939293001, Y: 139.30560536166368, Width: 10.5, Height: 8
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Text: 'C', X: 40.63103459915138, Y: 140.61147163247105, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 58.593487731340275, Y: 131.81657098073444, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 76.55594086352917, Y: 123.02167032899783, Width: 10.5, Height: 8
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Text: 'U', X: 80.11582150422467, Y: 105.887574209739, Width: 10.5, Height: 8
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Text: 'U', X: 90.84766766136397, Y: 92.06449647504132, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 106.56481330509729, Y: 84.36895667502233, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 124.06481330509718, Y: 84.36895860098366, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 139.7819572549659, Y: 92.06450186050108, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 150.51380036950928, Y: 105.88758195738353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 170.51380036950928, Y: 105.88758195738353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 190.51380036950928, Y: 105.88758195738353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 210.51380036950928, Y: 105.88758195738353, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 218.5974927169587, Y: 90.51419714751705, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 231.28083672120448, Y: 78.64744412276741, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 247.15741059994014, Y: 71.6031950958311, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 264.46670392910255, Y: 70.16256782777793, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 281.2893358919041, Y: 74.48530958788479, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 295.75989023689806, Y: 84.09208321012773, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 306.2737662510518, Y: 97.91761949771694, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font./disk1/www/rails/humanrnamap/cli/./main.py:567: DeprecationWarning: Call to deprecated function (or staticmethod) VARNA. (Class has been renamed 'Structure')
  v = VARNA(structure=fold_dbn, sequence=seq)
Output file: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_2.svg


Text: 'C', X: 325.9985927588933, Y: 94.61138005757425, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 342.21187210181773, Y: 88.02489064548081, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 357.6252469668219, Y: 96.31223914172358, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 376.8817168549598, Y: 101.71486511871308, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 396.1381867430976, Y: 107.11749109570269, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 415.3946566312354, Y: 112.52011707269222, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 434.65112651937324, Y: 117.92274304968177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 450.988578293757, Y: 111.65075277958624, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 467.8771210132131, Y: 116.23630806129327, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 478.7990222595987, Y: 129.90972261628602, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 479.5392333455386, Y: 147.39406646948046, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 469.8120873623337, Y: 161.94167188927057, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 453.3715455465392, Y: 167.9382356746061, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 436.5624449953897, Y: 163.06952628814307, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 425.8718593067652, Y: 149.2145066179057, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 406.6153894186274, Y: 143.81188064091614, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 387.3589195304896, Y: 138.4092546639266, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 368.10244964235176, Y: 133.00662868693703, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 348.84597975421394, Y: 127.60400270994748, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 331.371231849125, Y: 126.66422313281672, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 311.6464053412836, Y: 129.9704625729593, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 306.1532763163774, Y: 146.58598343496467, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 295.4736991912939, Y: 160.44948344143464, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 280.80981468690914, Y: 170.00042534483165, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 263.8122548912242, Y: 174.16371262679, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 258.958033254473, Y: 193.56568500851697, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 254.10381161772182, Y: 212.96765739024394, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 249.24958998097065, Y: 232.36962977197092, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 259.31612334369885, Y: 246.68447891742406, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 261.4558262716801, Y: 264.05317695095516, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 255.16452792616224, Y: 280.3831973161502, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 241.92462528955855, Y: 291.826753501762, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.92462528955855, Y: 311.826753501762, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.92462528955855, Y: 331.826753501762, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 55.17462528955855, Y: 351.826753501762, Width: 9.0, Height: 8
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Text: '10', X: 118.17462528955855, Y: 251.82675350176203, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 184.56335261237268, Y: 87.38379604104989, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 297.25862923673577, Y: 70.59250936085573, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 200.05488898513636, Y: 203.9805462395202, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 185.67462528955855, Y: 311.826753501762, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 199.44700645394718, Y: 166.5405715739074, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 61.54539520359582, Y: 186.900405143896, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 58.20748208187234, Y: 97.5045729916402, Width: 18.0, Height: 8
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Text: '90', X: 216.48900956875642, Y: 61.971771628518184, Width: 18.0, Height: 8
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Text: '100', X: 393.29081272008716, Y: 87.86102120756487, Width: 27.0, Height: 8
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Text: '110', X: 409.18185317217996, Y: 167.34642037371657, Width: 27.0, Height: 8
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Text: '120', X: 270.8126133628163, Y: 187.10305443725076, Width: 27.0, Height: 8
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Text: '129', X: 233.67462528955855, Y: 351.826753501762, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'KPNB1, -28.8 ± 1.3
 kcal/mol, AUC: 0.691', X: 176.1446166727693, Y: 364.62675350176204, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 5.0, 490.0392333455386, 364.62675350176204)
Updated viewBox: -0.25 0.0 495.2892333455386 369.62675350176204
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_5.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_5.svg
['java', '-cp', '/disk1/www/rails/humanrnamap/cli/bin/VARNAv3-93.jar', 'fr.orsay.lri.varna.applications.VARNAcmd', '-sequenceDBN', 'ACAGGGCAUCCUGAAUUUUAGAGCCUUUCAGCAAUAAGAAGGGAUGUUGGUGAGCUUUGAUCCUCUUUUGGUUUUGCAGUUGUUAGGAGUUUUUGCUGGCAUUUUGAAUAUGCUGCUUUCAGAAAAACC', '-structureDBN', '.((((....))))....(((((((...(((.(((((........))))).)))))))))).((......))((((((....).)))))((((((((.(((((.......)))))))......)))))).', '-o', '/disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_2.svg', '-title', 'KPNB1, -30.1 ± 1.6\n kcal/mol, AUC: 0.724', '-titleSize', '12', '-basesStyle1', 'fill=#ffffff', '-applyBasesStyle1on', '4,5,6,9,12,13,16,17,18,19,21,23,26,27,28,31,35,38,41,42,43,45,46,47,48,49,50,51,52,54,56,57,58,59,61,64,66,67,68,69,70,71,72,73,74,75,76,79,80,81,82,83,84,86,87,89,90,91,92,93,94,95,97,98,99,102,103,104,105,106,109,111,112,114,115,117,118,119,122', '-basesStyle2', 'fill=#00ffff', '-applyBasesStyle2on', '128,65,3,11,85,88,29,96,100,101,44,127,110,113,116,123,124,62,63', '-basesStyle3', 'fill=#ffff00', '-applyBasesStyle3on', '1,121,129,37,8,10,15,20,53,22,24,25,125', '-basesStyle4', 'fill=#ff0000', '-applyBasesStyle4on', '2,7,77,14,78,30,32,33,34,36,39,40,107,108,55,120,60,126']
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 4.75, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'C', X: 22.25, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'A', X: 22.25, Y: 262.2392435150666, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 242.23924351506665, Width: 10.5, Height: 8
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Text: 'G', X: 22.25, Y: 222.23924351506665, Width: 10.5, Height: 8
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Text: 'G', X: 18.701265612760892, Y: 205.10279884747547, Width: 10.5, Height: 8
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Text: 'C', X: 29.749982120067017, Y: 191.5316119009417, Width: 10.5, Height: 8
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Text: 'A', X: 47.25001787993298, Y: 191.5316119009417, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 58.298734387239094, Y: 205.10279884747547, Width: 10.5, Height: 8
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Text: 'C', X: 54.75, Y: 222.23924351506665, Width: 10.5, Height: 8
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Text: 'C', X: 54.75, Y: 242.23924351506665, Width: 10.5, Height: 8
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Text: 'U', X: 54.75, Y: 262.2392435150666, Width: 10.5, Height: 8
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Text: 'G', X: 54.75, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'A', X: 72.25, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'A', X: 89.75, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'U', X: 107.25, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'U', X: 124.75, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'U', X: 142.25, Y: 282.2392435150666, Width: 10.5, Height: 8
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Text: 'U', X: 142.25, Y: 262.2392435150666, Width: 10.5, Height: 8
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Text: 'A', X: 142.25, Y: 242.23924351506668, Width: 10.5, Height: 8
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Text: 'G', X: 142.25, Y: 222.23924351506668, Width: 10.5, Height: 8
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Text: 'A', X: 142.25, Y: 202.23924351506668, Width: 10.5, Height: 8
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Text: 'G', X: 142.25, Y: 182.23924351506668, Width: 10.5, Height: 8
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Text: 'C', X: 142.25, Y: 162.23924351506668, Width: 10.5, Height: 8
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Text: 'C', X: 133.45286268950832, Y: 147.11115418937158, Width: 10.5, Height: 8
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Text: 'U', X: 136.5095795270139, Y: 129.88021707959246, Width: 10.5, Height: 8
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Text: 'U', X: 149.97352309500576, Y: 118.70117708933452, Width: 10.5, Height: 8
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Text: 'U', X: 167.47272276333175, Y: 118.86464719031022, Width: 10.5, Height: 8
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Text: 'C', X: 184.8551648527225, Y: 108.9726955623969, Width: 10.5, Height: 8
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Text: 'A', X: 202.23760694211327, Y: 99.08074393448356, Width: 10.5, Height: 8
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Text: 'G', X: 212.99297909829536, Y: 85.27605740630594, Width: 10.5, Height: 8
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Text: 'C', X: 230.3545619314289, Y: 83.07996043953335, Width: 10.5, Height: 8
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Text: 'A', X: 247.73696935235114, Y: 73.18794789136768, Width: 10.5, Height: 8
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Text: 'A', X: 265.1193767732734, Y: 63.29593534320202, Width: 10.5, Height: 8
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Text: 'U', X: 282.5017841941957, Y: 53.40392279503635, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 299.88419161511797, Y: 43.511910246870684, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 305.46518420000046, Y: 26.925680089848242, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 319.167884338909, Y: 16.04052882965027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 336.5866548947971, Y: 14.356206599327265, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 352.12108268889205, Y: 22.414249920399925, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 360.77660086220664, Y: 37.623869054541785, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 359.77032196057723, Y: 55.09492831911899, Width: 10.5, Height: 8
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Text: 'G', X: 349.42578073659286, Y: 69.21020287966229, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 333.0689125548236, Y: 75.43140632742524, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 315.95871200588715, Y: 71.75832230586934, Width: 10.5, Height: 8
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Text: 'G', X: 298.5763045849649, Y: 81.65033485403501, Width: 10.5, Height: 8
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Text: 'U', X: 281.1938971640426, Y: 91.54234740220068, Width: 10.5, Height: 8
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Text: 'U', X: 263.8114897431204, Y: 101.43435995036634, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 246.4290823221981, Y: 111.32637249853201, Width: 10.5, Height: 8
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Text: 'G', X: 235.67368870736473, Y: 125.13113646572833, Width: 10.5, Height: 8
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Text: 'U', X: 218.3120283374724, Y: 127.32721232974353, Width: 10.5, Height: 8
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Text: 'G', X: 200.92958624808165, Y: 137.21916395765686, Width: 10.5, Height: 8
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Text: 'A', X: 183.54714415869086, Y: 147.1111155855702, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.75, Y: 162.23924351506668, Width: 10.5, Height: 8
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Text: 'C', X: 174.75, Y: 182.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 202.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 222.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 174.75, Y: 242.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 174.75, Y: 262.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 174.75, Y: 282.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 192.25, Y: 282.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.75, Y: 282.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.75, Y: 262.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 200.90309990849715, Y: 247.14018690248187, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 203.8683050233931, Y: 229.89325353896282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 217.2500121168788, Y: 218.61588385081177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 234.7499878831212, Y: 218.61588385081177, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 248.13169497660692, Y: 229.89325353896282, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 251.09690009150285, Y: 247.1401869024819, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.25, Y: 262.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 242.25, Y: 282.2392435150666, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.75, Y: 282.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.75, Y: 262.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.75, Y: 242.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.75, Y: 222.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 259.75, Y: 202.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 255.93439675932206, Y: 185.16014191191084, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 245.43022870266896, Y: 171.16322421428268, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 249.65291788803466, Y: 154.1802872586091, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 265.4891088442718, Y: 146.73271667524568, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 281.2629027326492, Y: 154.31154758532506, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 285.34440558102114, Y: 171.32896766286092, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 296.0656344922436, Y: 185.16028179540695, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 292.25, Y: 202.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 292.25, Y: 222.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 292.25, Y: 242.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 292.25, Y: 262.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 292.25, Y: 282.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 309.75, Y: 282.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 262.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 242.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 222.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 202.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.75, Y: 182.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 296.87556249169285, Y: 169.3648060067595, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 276.87556249169285, Y: 169.3648060067595, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.79653083025784, Y: 173.18042487334216, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 245.96522149725547, Y: 162.4590839142027, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 227.86681386667897, Y: 153.94746589895493, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 209.7684062361025, Y: 145.43584788370708, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 191.66999860552602, Y: 136.92422986845924, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 173.57159097494954, Y: 128.41261185321144, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 156.42208580349325, Y: 131.89753147964188, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 140.52395423428288, Y: 124.58318905967252, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 132.01270299740304, Y: 109.2923815332141, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 134.1730475965581, Y: 91.92623332351064, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 146.1712542832434, Y: 79.18679735750072, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 163.37689981843678, Y: 75.99055673048804, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 179.14987347484526, Y: 83.57102468851878, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 187.40297024972725, Y: 99.00269945352466, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 205.50137788030372, Y: 107.5143174687725, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 223.5997855108802, Y: 116.0259354840203, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 241.69819314145667, Y: 124.53755349926809, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 259.7966007720331, Y: 133.04917151451593, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 276.87556249169285, Y: 136.86480600675947, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 296.87556249169285, Y: 136.86480600675947, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 309.0226846756771, Y: 124.4082540620588, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 325.7902913113082, Y: 119.76437298946308, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'U', X: 342.6149715016777, Y: 124.19702458816295, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 354.9177814185965, Y: 136.49983450508176, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 359.35043301729644, Y: 153.32451469545134, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'G', X: 354.7065519447007, Y: 170.09212133108235, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 342.25, Y: 182.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 342.25, Y: 202.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 342.25, Y: 222.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 342.25, Y: 242.23924351506668, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'A', X: 342.25, Y: 262.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 342.25, Y: 282.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'C', X: 359.75, Y: 282.2392435150667, Width: 10.5, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '1', X: 5.5, Y: 302.2392435150666, Width: 9.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '10', X: 70.85671253071119, Y: 219.84948045720986, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '20', X: 118.5, Y: 242.23924351506668, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '30', X: 188.59564008412536, Y: 81.69831051218998, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '40', X: 362.2357644101668, Y: 8.0, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '50', X: 241.8156707954194, Y: 142.51356122091153, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '60', X: 185.14213562373095, Y: 296.38137913879757, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '70', X: 251.31480957513833, Y: 277.59439429755474, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '80', X: 261.82215804261875, Y: 126.73288910522263, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '90', X: 286.0, Y: 262.2392435150667, Width: 18.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '100', X: 193.00678822085467, Y: 163.53425551428356, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '110', X: 190.47427550545385, Y: 82.51549085695933, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '120', X: 364.0092112734505, Y: 126.5361599525294, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: '129', X: 351.5, Y: 302.2392435150667, Width: 27.0, Height: 8
Warning: Font Verdana not found. Using default font.
Text: 'KPNB1, -30.1 ± 1.6
 kcal/mol, AUC: 0.724', X: 116.76330043110332, Y: 315.0392435150667, Width: 142.5, Height: 23
Calculated bounding box: (4.75, 0.0, 391.0092112734505, 315.0392435150667)
Updated viewBox: -0.25 -5.0 396.2592112734505 325.0392435150667
Updated SVG: /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_2.svg
Combined SVG saved as /disk1/www/rails/humanrnamap/public/result/8d682347-973e-4d09-a26b-4b6b859cbe89/final_image/KPNB1_fold_final_2.svg
