Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
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 95% [================================================  ] -                     done.
Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
Converting CT file...CT file conversion complete.
first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 158.45 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 158.45 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 158.45 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.02 MB
Based on canonical annotations, the following gene is in your area of interest: MIR212(-)
write fasta - Elapsed time since the previous call: 0.59 seconds
write fasta - Current memory usage: 172.02 MB
NO SIGNAL COVERAGE IN THIS AREA. STRUCTURE PREDICTION WILL BE BASED ON SEQUENCE ALONE.
Too few A/C datapoints for AUC calculation. Recommended >= 10. Region contains only 0.
Length of region: 110 nt.
0.0% of the region's A/C bases included in the filtered DMS dataset. This is lower than the recommended 70%. While structure prediction is still possible even without any coverage, the structures will be based on the sequence alone, rather than based on experimental constraints.
write dat - Elapsed time since the previous call: 0.04 seconds
write dat - Current memory usage: 173.59 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/fasta/miR_212.fasta" "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/ct/miR_212.ct" --SHAPE "miR_212.dat"

fold - Elapsed time since the previous call: 0.14 seconds
fold - Current memory usage: 173.59 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/ct/miR_212.ct" "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/fold_FE/miR_212.txt" -sh "miR_212.dat"

efn2 - Elapsed time since the previous call: 0.45 seconds
efn2 - Current memory usage: 173.59 MB
This region has 3 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/ct/miR_212.ct" 1 "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/fold_dbn/miR_212_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 173.59 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/ct/miR_212.ct" 2 "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/fold_dbn/miR_212_temp2.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 173.59 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/ct/miR_212.ct" 3 "/disk1/www/rails/humanrnamap/public/result/c6236906-ab77-4b1a-922e-12dded9133d0/fold_dbn/miR_212_temp3.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 173.59 MB
Traceback (most recent call last):
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 665, in <module>
    main()
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 512, in main
    AUC = AUC_list[x-1]
          ~~~~~~~~^^^^^
IndexError: list index out of range
