Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
  0% [=                                                 ] /                     
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 92% [===============================================   ] /                     done.
Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 159.39 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 159.39 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 159.39 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 173.03 MB
Based on canonical annotations, the following gene is in your area of interest: FOXRED2(-)
write fasta - Elapsed time since the previous call: 0.33 seconds
write fasta - Current memory usage: 173.03 MB
Length of region: 65 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.19 seconds
write dat - Current memory usage: 176.44 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/fasta/FOXRED2.fasta" "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/ct/FOXRED2.ct" --SHAPE "FOXRED2.dat"

fold - Elapsed time since the previous call: 0.07 seconds
fold - Current memory usage: 176.44 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/ct/FOXRED2.ct" "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/fold_FE/FOXRED2.txt" -sh "FOXRED2.dat"

efn2 - Elapsed time since the previous call: 0.42 seconds
efn2 - Current memory usage: 176.44 MB
This region has 1 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/ct/FOXRED2.ct" 1 "/disk1/www/rails/humanrnamap/public/result/c85f24bc-baf2-4dac-90a3-daa136b84934/fold_dbn/FOXRED2_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.02 seconds
ct2dot - Current memory usage: 176.44 MB
Traceback (most recent call last):
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 665, in <module>
    main()
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 512, in main
    AUC = AUC_list[x-1]
          ~~~~~~~~^^^^^
IndexError: list index out of range
