Initializing nucleic acids...done.
Applying constraints...done.
Folding single strand...
  0% [=                                                 ] /                     
  8% [=====                                             ] -                     
 16% [=========                                         ] \                     
 24% [=============                                     ] |                     
 32% [=================                                 ] /                     
 40% [=====================                             ] -                     
 48% [=========================                         ] \                     
 56% [=============================                     ] |                     
 64% [=================================                 ] /                     
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 80% [=========================================         ] \                     
 88% [=============================================     ] |                     
 96% [================================================= ] /                     done.
Writing output ct file...done.
Single strand folding complete.
Initializing nucleic acids...done.
Applying SHAPE constraints...done.
Calculating free energies...done.
efn2 complete.
Converting CT file...CT file conversion complete.
first - Elapsed time since the previous call: 0.00 seconds
first - Current memory usage: 159.01 MB
setup complete - Elapsed time since the previous call: 0.00 seconds
setup complete - Current memory usage: 159.01 MB
config complete - Elapsed time since the previous call: 0.00 seconds
config complete - Current memory usage: 159.01 MB
read annotations - Elapsed time since the previous call: 0.09 seconds
read annotations - Current memory usage: 172.64 MB
Based on canonical annotations, the following gene is in your area of interest: SON(+)
write fasta - Elapsed time since the previous call: 0.13 seconds
write fasta - Current memory usage: 172.64 MB
Length of region: 62 nt.
100.0% of the region's A/C bases included in the filtered DMS dataset. Ideally, this number should be as high as possible for an experimenally-accurate prediction, and over 70% is recommended.
write dat - Elapsed time since the previous call: 0.19 seconds
write dat - Current memory usage: 175.98 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/Fold "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/fasta/SON.fasta" "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/ct/SON.ct" --SHAPE "SON.dat"

fold - Elapsed time since the previous call: 0.07 seconds
fold - Current memory usage: 175.98 MB
Running command: /disk1/www/rails/humanrnamap/cli/bin/efn2 "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/ct/SON.ct" "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/fold_FE/SON.txt" -sh "SON.dat"

efn2 - Elapsed time since the previous call: 0.42 seconds
efn2 - Current memory usage: 175.98 MB
This region has 1 predicted structures. 5 is the maximum structures visible on the web server. For up to 20 predictions per region, download and run the code locally.
Running command: /disk1/www/rails/humanrnamap/cli/bin/ct2dot "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/ct/SON.ct" 1 "/disk1/www/rails/humanrnamap/public/result/e3483c5f-2b5a-4cb9-9c96-afe6ba7d54cb/fold_dbn/SON_temp1.dbn"

ct2dot - Elapsed time since the previous call: 0.01 seconds
ct2dot - Current memory usage: 175.98 MB
Traceback (most recent call last):
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 665, in <module>
    main()
  File "/disk1/www/rails/humanrnamap/cli/./main.py", line 512, in main
    AUC = AUC_list[x-1]
          ~~~~~~~~^^^^^
IndexError: list index out of range
